BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004217
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326952.1| predicted protein [Populus trichocarpa] gi|2...   219   6e-55
ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis...   214   2e-53
ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [...   214   3e-53
ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [...   209   8e-52
ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arab...   208   1e-51

>ref|XP_002326952.1| predicted protein [Populus trichocarpa] gi|222835267|gb|EEE73702.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  219 bits (559), Expect = 6e-55
 Identities = 119/204 (58%), Positives = 144/204 (70%), Gaps = 6/204 (2%)
 Frame = -3

Query: 932 MASSLLPKGIPVLRQRLTQ--RVSTVRFI----NWASIKSVFETPPDTVNNNGDTTTPTE 771
           MA+S L +G P+LR RL    R +TV  +    +W S      TP   +  +G   +   
Sbjct: 1   MAASALIRGAPLLRLRLQHHHRFATVLLVPLRRSWCSTAE--STP---LEEDGVPLSTPA 55

Query: 770 STSYFRSPKYNSVTKLSSHEDNNSEYRQWKDREDEILQDIEPIVSLAKQILHTDRYADGE 591
           + S  ++PK       SS +D N  YRQWKD E +I +DIEPI  LAK+I+H+DRY DGE
Sbjct: 56  ALSLRKAPKN------SSWDDQN--YRQWKDEEADIWRDIEPITHLAKEIIHSDRYMDGE 107

Query: 590 WLSAEDEKVVVEKLLAYHPHSEDKVGCGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSY 411
            L+ EDEKVV E+LLAYHP+S+DK+GCGLDSIMVDRHPQFK SRCLFVVRTDGGWIDFSY
Sbjct: 108 QLTDEDEKVVAERLLAYHPNSDDKIGCGLDSIMVDRHPQFKNSRCLFVVRTDGGWIDFSY 167

Query: 410 QKCLRAYIRDKYPAYAKRFIWEHF 339
           QKCLRAYIR KYP +A+RFI EHF
Sbjct: 168 QKCLRAYIRSKYPTHAERFIKEHF 191


>ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|302142270|emb|CBI19473.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  214 bits (546), Expect = 2e-53
 Identities = 112/201 (55%), Positives = 139/201 (69%), Gaps = 3/201 (1%)
 Frame = -3

Query: 932 MASSLLPKGIPVLR---QRLTQRVSTVRFINWASIKSVFETPPDTVNNNGDTTTPTESTS 762
           M++ LL + +P+LR    RL   + T+    W S      +  + V+     TT   S  
Sbjct: 1   MSAPLLLRAVPLLRLRHHRLAAPLFTLAQRPWCSSTESSRSDVN-VSYADKNTTVLSSRD 59

Query: 761 YFRSPKYNSVTKLSSHEDNNSEYRQWKDREDEILQDIEPIVSLAKQILHTDRYADGEWLS 582
               P+++           + ++R+WK+RE+EIL+DIEPI SL K+ILH+DRY DGE L+
Sbjct: 60  PANYPRWD-----------DPDFRKWKNREEEILRDIEPITSLTKEILHSDRYMDGERLT 108

Query: 581 AEDEKVVVEKLLAYHPHSEDKVGCGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKC 402
           AEDEK VVEKLL YHPHSEDK+GCGLD IMVDRHPQF+ SRCLFVVRTDGGWIDFSYQKC
Sbjct: 109 AEDEKAVVEKLLIYHPHSEDKIGCGLDCIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKC 168

Query: 401 LRAYIRDKYPAYAKRFIWEHF 339
           LRAYIRDKYP++A RFI  HF
Sbjct: 169 LRAYIRDKYPSHADRFIRVHF 189


>ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
          Length = 196

 Score =  214 bits (544), Expect = 3e-53
 Identities = 114/205 (55%), Positives = 143/205 (69%), Gaps = 7/205 (3%)
 Frame = -3

Query: 932 MASSLLPKGIPVLRQRLTQRVS-------TVRFINWASIKSVFETPPDTVNNNGDTTTPT 774
           MA+S L +G P+LR  L +R         T RF   A+  S   TP D     GD  T  
Sbjct: 1   MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAAS---TPSDGDLTAGDNATSV 57

Query: 773 ESTSYFRSPKYNSVTKLSSHEDNNSEYRQWKDREDEILQDIEPIVSLAKQILHTDRYADG 594
            S S    PKY           +  +YR+WK++E+EIL DIEPI+ L K+ILH+ RYADG
Sbjct: 58  VSVS--EPPKYLRW--------DEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHRYADG 107

Query: 593 EWLSAEDEKVVVEKLLAYHPHSEDKVGCGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFS 414
           E L+ EDE+ VV++LLA+HPH+EDK+GCGL+SIMVDRHPQF++SRC FV+RTDGGWIDFS
Sbjct: 108 ERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFS 167

Query: 413 YQKCLRAYIRDKYPAYAKRFIWEHF 339
           YQKCLRAYIR+KYP++A+RFI EHF
Sbjct: 168 YQKCLRAYIRNKYPSFAERFIREHF 192


>ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [Glycine max]
          Length = 203

 Score =  209 bits (532), Expect = 8e-52
 Identities = 98/144 (68%), Positives = 118/144 (81%)
 Frame = -3

Query: 770 STSYFRSPKYNSVTKLSSHEDNNSEYRQWKDREDEILQDIEPIVSLAKQILHTDRYADGE 591
           ++S+ R  +Y   ++    +D   +YR+WKD+E EIL DIEPIV LAK ILH+ RY DG 
Sbjct: 57  NSSFARKAQYPPSSEARWEDD--PDYRKWKDKEKEILSDIEPIVVLAKDILHSRRYMDGA 114

Query: 590 WLSAEDEKVVVEKLLAYHPHSEDKVGCGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSY 411
            L+ EDEK +VEKLLAYHPHSEDK+GCGL+SIMVDRHPQ+++SRCLFVVRTDGGWIDFSY
Sbjct: 115 RLNEEDEKAIVEKLLAYHPHSEDKIGCGLESIMVDRHPQYRQSRCLFVVRTDGGWIDFSY 174

Query: 410 QKCLRAYIRDKYPAYAKRFIWEHF 339
           QKCLR YIRDKYP +A+RFI EHF
Sbjct: 175 QKCLREYIRDKYPTHAERFIREHF 198


>ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arabidopsis lyrata subsp.
           lyrata] gi|297323335|gb|EFH53756.1| hypothetical protein
           ARALYDRAFT_905861 [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  208 bits (530), Expect = 1e-51
 Identities = 113/214 (52%), Positives = 138/214 (64%), Gaps = 16/214 (7%)
 Frame = -3

Query: 932 MASSLLPKGIPVLRQRLTQRVSTVRFIN----------WASI--KSVFETPPDTVNNNG- 792
           M S LL + +P+LR         V  +           W S+  K  F     T   +G 
Sbjct: 1   MTSLLLLRTLPLLRNGFLNHRHQVGIVAGGILSHRRRLWCSLADKPQFYENDSTAEGSGA 60

Query: 791 --DTTTPTESTSY-FRSPKYNSVTKLSSHEDNNSEYRQWKDREDEILQDIEPIVSLAKQI 621
             +TT+P    S+ F  P                +YR+WK+ E EIL+DIEPI  LAK+I
Sbjct: 61  GMNTTSPAVDNSWRFEDP----------------DYRKWKNLEAEILRDIEPIALLAKEI 104

Query: 620 LHTDRYADGEWLSAEDEKVVVEKLLAYHPHSEDKVGCGLDSIMVDRHPQFKRSRCLFVVR 441
           LH+DRY DGE L  EDEK+V+EKLLAYHP+S+DK+GCGLD IMVDRHPQF+ SRCLFVVR
Sbjct: 105 LHSDRYLDGERLEFEDEKIVMEKLLAYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVR 164

Query: 440 TDGGWIDFSYQKCLRAYIRDKYPAYAKRFIWEHF 339
           TDGGWIDFSYQKCLRAY+RDKYP++A+RFI EHF
Sbjct: 165 TDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHF 198