BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004214
         (1684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...   741   0.0  
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   726   0.0  
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              725   0.0  
gb|ACI43571.1| RBP50 [Cucurbita maxima]                               715   0.0  
ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot...   708   0.0  

>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            isoform 1 [Vitis vinifera]
          Length = 448

 Score =  741 bits (1912), Expect = 0.0
 Identities = 372/449 (82%), Positives = 399/449 (88%), Gaps = 1/449 (0%)
 Frame = +3

Query: 66   MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 245
            MTEPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1    MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 246  YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 425
            Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61   YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 426  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 605
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 606  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGEAGSLYPLQPAGAR-VAFPQMGNX 782
            NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYG+ G +Y LQP GAR VAFPQMGN 
Sbjct: 180  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNA 239

Query: 783  XXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLRNKPD 962
                  F GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLLR+KPD
Sbjct: 240  TAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPD 299

Query: 963  HALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRFNRNA 1142
            HALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNRFNRNA
Sbjct: 300  HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNA 359

Query: 1143 SKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILFETEE 1322
            +KNYRYCCSPTKMIH+S+LPQD            HGSIVNTKLFE N KKQAL+LFETEE
Sbjct: 360  AKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEE 419

Query: 1323 QATEALVCKHATTIDRSVIRISFSQLQSI 1409
            QATEALVCKHA+ ID S IRISFSQLQ+I
Sbjct: 420  QATEALVCKHASLIDGSTIRISFSQLQAI 448


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
            [Vitis vinifera]
          Length = 445

 Score =  726 bits (1873), Expect = 0.0
 Identities = 362/448 (80%), Positives = 392/448 (87%)
 Frame = +3

Query: 66   MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 245
            MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 246  YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 425
            YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE-VSPNRILLVTIHHLLYPITVE 117

Query: 426  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 605
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 118  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 177

Query: 606  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGEAGSLYPLQPAGARVAFPQMGNXX 785
            NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYG+AG +Y LQP    V FPQM N  
Sbjct: 178  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQMPNAS 237

Query: 786  XXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLRNKPDH 965
                 F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLLRNKPDH
Sbjct: 238  AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDH 297

Query: 966  ALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRFNRNAS 1145
            ALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNRFNRNA+
Sbjct: 298  ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAA 357

Query: 1146 KNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILFETEEQ 1325
            KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++FE EEQ
Sbjct: 358  KNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQ 417

Query: 1326 ATEALVCKHATTIDRSVIRISFSQLQSI 1409
            ATEALVCKHAT +    IRISFSQLQ I
Sbjct: 418  ATEALVCKHATPLGGLAIRISFSQLQGI 445


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  725 bits (1871), Expect = 0.0
 Identities = 362/448 (80%), Positives = 392/448 (87%)
 Frame = +3

Query: 66   MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 245
            MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 246  YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 425
            YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE---PNRILLVTIHHLLYPITVE 115

Query: 426  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 605
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 606  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGEAGSLYPLQPAGARVAFPQMGNXX 785
            NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYG+AG +Y LQP    V FPQM N  
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQMPNAS 235

Query: 786  XXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLRNKPDH 965
                 F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLLRNKPDH
Sbjct: 236  AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDH 295

Query: 966  ALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRFNRNAS 1145
            ALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNRFNRNA+
Sbjct: 296  ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAA 355

Query: 1146 KNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILFETEEQ 1325
            KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++FE EEQ
Sbjct: 356  KNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQ 415

Query: 1326 ATEALVCKHATTIDRSVIRISFSQLQSI 1409
            ATEALVCKHAT +    IRISFSQLQ I
Sbjct: 416  ATEALVCKHATPLGGLAIRISFSQLQGI 443


>gb|ACI43571.1| RBP50 [Cucurbita maxima]
          Length = 445

 Score =  715 bits (1846), Expect = 0.0
 Identities = 357/450 (79%), Positives = 394/450 (87%), Gaps = 2/450 (0%)
 Frame = +3

Query: 66   MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 245
            MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQAL+QM D+ SAV+A+Q+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 246  YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 425
            + +VQPS+RGRNVY+QFSSHQELTT DQN  GR  GD+   PNRILLVTIHH+LYPITVE
Sbjct: 61   FANVQPSIRGRNVYVQFSSHQELTTADQNAQGR--GDE---PNRILLVTIHHMLYPITVE 115

Query: 426  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 605
            VLHQVF PHGFVEKIVTFQKSAGFQAL+QYQTRQ A++ART+LQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYDGCCQLDIQFS 175

Query: 606  NLTELQVNYNNERSRDFTNPSLPSEQKGR-SSQPGYGEAGSLYPLQPAGAR-VAFPQMGN 779
            NL ELQVNYNNERSRDFTNPSLPSE KGR S QPGYG+AG +Y LQ +GA  V FPQM N
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGAGPVGFPQMAN 235

Query: 780  XXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLRNKP 959
                   F GGLPPG+SGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNI R+KLLRNKP
Sbjct: 236  AAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIARIKLLRNKP 295

Query: 960  DHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRFNRN 1139
            DHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSKH +IT GADTHEY NSNLNRFNRN
Sbjct: 296  DHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRN 355

Query: 1140 ASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILFETE 1319
            A+KNYRYCCSPTKMIH+SSL Q+            HG I+NTKLFE+N KKQALI+F+TE
Sbjct: 356  AAKNYRYCCSPTKMIHISSLSQEVTEEEIVNLLEEHGPIINTKLFEMNGKKQALIMFDTE 415

Query: 1320 EQATEALVCKHATTIDRSVIRISFSQLQSI 1409
            EQATEALVCKHA+++  S+IRISFSQLQSI
Sbjct: 416  EQATEALVCKHASSLSGSIIRISFSQLQSI 445


>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
            [Vitis vinifera]
          Length = 432

 Score =  708 bits (1827), Expect = 0.0
 Identities = 358/448 (79%), Positives = 387/448 (86%)
 Frame = +3

Query: 66   MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 245
            MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 246  YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 425
            YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE---PNRILLVTIHHLLYPITVE 115

Query: 426  VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 605
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 606  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGEAGSLYPLQPAGARVAFPQMGNXX 785
            NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYG+AG           V FPQM N  
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAG-----------VGFPQMPNAS 224

Query: 786  XXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLRNKPDH 965
                 F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLLRNKPDH
Sbjct: 225  AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDH 284

Query: 966  ALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRFNRNAS 1145
            ALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNRFNRNA+
Sbjct: 285  ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAA 344

Query: 1146 KNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILFETEEQ 1325
            KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++FE EEQ
Sbjct: 345  KNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQ 404

Query: 1326 ATEALVCKHATTIDRSVIRISFSQLQSI 1409
            ATEALVCKHAT +    IRISFSQLQ I
Sbjct: 405  ATEALVCKHATPLGGLAIRISFSQLQGI 432