BLASTX nr result

ID: Coptis21_contig00004213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004213
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301546.1| predicted protein [Populus trichocarpa] gi|2...   131   2e-28
emb|CBI37067.3| unnamed protein product [Vitis vinifera]              129   6e-28
ref|XP_002281797.1| PREDICTED: uncharacterized protein LOC100250...   129   6e-28
emb|CAN67130.1| hypothetical protein VITISV_040171 [Vitis vinifera]   129   6e-28
ref|XP_002320944.1| predicted protein [Populus trichocarpa] gi|2...   122   8e-26

>ref|XP_002301546.1| predicted protein [Populus trichocarpa] gi|222843272|gb|EEE80819.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  131 bits (329), Expect = 2e-28
 Identities = 66/95 (69%), Positives = 77/95 (81%), Gaps = 4/95 (4%)
 Frame = -2

Query: 278 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEE-VEKHYKILLED 102
           MD    + YGWSWEENKLFE+ALAVV+E++PDRW  VA MVGGR +EE V+KHY ILLED
Sbjct: 1   MDDLPKVLYGWSWEENKLFEMALAVVDEEDPDRWKVVAAMVGGRKSEEDVQKHYVILLED 60

Query: 101 LRYIESGYMDHTL-GEAQPCVPV--AQSLSWTDED 6
           L+ IESG +DHTL GEAQPCV V  +QS+ WTDED
Sbjct: 61  LQGIESGKLDHTLVGEAQPCVQVDCSQSVCWTDED 95


>emb|CBI37067.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  129 bits (325), Expect = 6e-28
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = -2

Query: 278 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEEVEKHYKILLEDL 99
           MD F ++   WSWEENK FELALAVV+E +PDRW  VA MVGG+SAEEVEKHY ILL+DL
Sbjct: 1   MDDFPNVLCEWSWEENKSFELALAVVDERDPDRWKVVAAMVGGKSAEEVEKHYVILLQDL 60

Query: 98  RYIESGYMDHTLGEAQPCVPVAQSLSWTDED 6
           ++IESG MDH LGEAQPCV   Q   WTD+D
Sbjct: 61  QFIESGEMDHKLGEAQPCV---QLECWTDQD 88


>ref|XP_002281797.1| PREDICTED: uncharacterized protein LOC100250300 [Vitis vinifera]
          Length = 98

 Score =  129 bits (325), Expect = 6e-28
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = -2

Query: 278 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEEVEKHYKILLEDL 99
           MD F ++   WSWEENK FELALAVV+E +PDRW  VA MVGG+SAEEVEKHY ILL+DL
Sbjct: 1   MDDFPNVLCEWSWEENKSFELALAVVDERDPDRWKVVAAMVGGKSAEEVEKHYVILLQDL 60

Query: 98  RYIESGYMDHTLGEAQPCVPVAQSLSWTDED 6
           ++IESG MDH LGEAQPCV   Q   WTD+D
Sbjct: 61  QFIESGEMDHKLGEAQPCV---QLECWTDQD 88


>emb|CAN67130.1| hypothetical protein VITISV_040171 [Vitis vinifera]
          Length = 202

 Score =  129 bits (325), Expect = 6e-28
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = -2

Query: 278 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEEVEKHYKILLEDL 99
           MD F ++   WSWEENK FELALAVV+E +PDRW  VA MVGG+SAEEVEKHY ILL+DL
Sbjct: 1   MDDFPNVLCEWSWEENKSFELALAVVDERDPDRWKVVAAMVGGKSAEEVEKHYVILLQDL 60

Query: 98  RYIESGYMDHTLGEAQPCVPVAQSLSWTDED 6
           ++IESG MDH LGEAQPCV   Q   WTD+D
Sbjct: 61  QFIESGEMDHKLGEAQPCV---QLECWTDQD 88


>ref|XP_002320944.1| predicted protein [Populus trichocarpa] gi|222861717|gb|EEE99259.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  122 bits (307), Expect = 8e-26
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 4/87 (4%)
 Frame = -2

Query: 254 YGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEE-VEKHYKILLEDLRYIESGY 78
           YGWSWEENKLFE+ALAVV+E++PDRW  VA MVGG+ +EE V+KHY ILLEDL+ IESG 
Sbjct: 2   YGWSWEENKLFEMALAVVDEEDPDRWKVVAAMVGGKKSEEDVQKHYVILLEDLQGIESGK 61

Query: 77  MDHTL-GEAQPCVPV--AQSLSWTDED 6
           +DH L GEAQPCV V   +S+ WTDED
Sbjct: 62  LDHKLVGEAQPCVQVDCTESVCWTDED 88


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