BLASTX nr result

ID: Coptis21_contig00004212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004212
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY60886.1| carotenoid cleavage dioxygenase 4 [Rosa x damascena]   115   5e-24
gb|ABK96278.1| unknown [Populus trichocarpa x Populus deltoides]      115   5e-24
ref|XP_003612461.1| 50S ribosomal protein L14 [Medicago truncatu...   114   6e-24
gb|AEI61930.1| carotenoid cleavage dioxygenase 4 [Nicotiana taba...   114   1e-23
ref|XP_002307055.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>gb|ABY60886.1| carotenoid cleavage dioxygenase 4 [Rosa x damascena]
          Length = 588

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   SDLPYQIRVTSDGDIVTIRRYNFGGEVSSMSSMTAHPKIDTQTGETFAFRYSPMPPFLTY 180
           SDLPY +R+T+DGD+ T+ R +F GE+    SMTAHPKID  TGETFAFRY P+PPFLTY
Sbjct: 252 SDLPYAVRLTADGDVETVGRNDFNGEL--FISMTAHPKIDPDTGETFAFRYGPVPPFLTY 309

Query: 181 FRIDENGSKQPDVPIYTLT 237
           FR D  G+KQPDVP+++LT
Sbjct: 310 FRFDPTGAKQPDVPVFSLT 328


>gb|ABK96278.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 507

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/80 (63%), Positives = 67/80 (83%)
 Frame = +1

Query: 1   SDLPYQIRVTSDGDIVTIRRYNFGGEVSSMSSMTAHPKIDTQTGETFAFRYSPMPPFLTY 180
           SDLPY +R+TS+GDI T+ R++F G++  + SMTAHPK+D +TGE FAFRY P+PPFLTY
Sbjct: 170 SDLPYAVRLTSNGDIETLGRHDFDGKL--LMSMTAHPKVDLETGEAFAFRYGPVPPFLTY 227

Query: 181 FRIDENGSKQPDVPIYTLTR 240
           F  D NG+KQPDVPI+++TR
Sbjct: 228 FHFDGNGNKQPDVPIFSMTR 247


>ref|XP_003612461.1| 50S ribosomal protein L14 [Medicago truncatula]
           gi|355513796|gb|AES95419.1| 50S ribosomal protein L14
           [Medicago truncatula]
          Length = 696

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/80 (67%), Positives = 64/80 (80%)
 Frame = +1

Query: 1   SDLPYQIRVTSDGDIVTIRRYNFGGEVSSMSSMTAHPKIDTQTGETFAFRYSPMPPFLTY 180
           SDLPY+I +T +GDI TI RY+F G++S   SMTAHPKID  TGETFAFRY PMPPFLTY
Sbjct: 246 SDLPYEINLTPNGDIQTIGRYDFNGKLSM--SMTAHPKIDGDTGETFAFRYGPMPPFLTY 303

Query: 181 FRIDENGSKQPDVPIYTLTR 240
           FR D NG K  DVP++++TR
Sbjct: 304 FRFDANGVKHNDVPVFSMTR 323


>gb|AEI61930.1| carotenoid cleavage dioxygenase 4 [Nicotiana tabacum]
          Length = 601

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/80 (63%), Positives = 64/80 (80%)
 Frame = +1

Query: 1   SDLPYQIRVTSDGDIVTIRRYNFGGEVSSMSSMTAHPKIDTQTGETFAFRYSPMPPFLTY 180
           SDLPY +++  DGDI+T+ RY+F G++    SMTAHPKID  T E FAFRY PMPPFLTY
Sbjct: 263 SDLPYAVKLAPDGDIITLGRYDFDGKL--FMSMTAHPKIDPDTNEAFAFRYGPMPPFLTY 320

Query: 181 FRIDENGSKQPDVPIYTLTR 240
           FRI+ NG+K PDVPI+++TR
Sbjct: 321 FRIEPNGTKTPDVPIFSMTR 340


>ref|XP_002307055.1| predicted protein [Populus trichocarpa] gi|222856504|gb|EEE94051.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/80 (63%), Positives = 66/80 (82%)
 Frame = +1

Query: 1   SDLPYQIRVTSDGDIVTIRRYNFGGEVSSMSSMTAHPKIDTQTGETFAFRYSPMPPFLTY 180
           SDLPY +R+TS+GDI T+ R++F G++  + SMTAHPK D +TGE FAFRY P+PPFLTY
Sbjct: 170 SDLPYAVRLTSNGDIETLGRHDFDGKL--LMSMTAHPKTDLETGEAFAFRYGPVPPFLTY 227

Query: 181 FRIDENGSKQPDVPIYTLTR 240
           F  D NG+KQPDVPI+++TR
Sbjct: 228 FHFDGNGNKQPDVPIFSMTR 247


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