BLASTX nr result

ID: Coptis21_contig00004209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004209
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF35185.1|AF195864_1 lipid transfer protein precursor [Gossy...   139   3e-31
gb|AEN70916.1| lipid transfer protein [Gossypium laxum]               137   7e-31
gb|AAC00499.1| lipid transfer protein precursor [Gossypium hirsu...   137   9e-31
gb|ADY68821.1| lipid transfer protein 3 [Gossypium raimondii] gi...   137   9e-31
gb|ABO42261.1| lipid transfer protein 4 precursor [Gossypium hir...   137   9e-31

>gb|AAF35185.1|AF195864_1 lipid transfer protein precursor [Gossypium hirsutum]
          Length = 120

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/100 (63%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6   APYAEAAISCGFVVSKLSPCIPYLSG-GAAFPPPACCSGVRALNAAAIGTPDRQTACNCL 182
           AP A+ AISCG + S L+PCI YL G GA   PPACC+G+R+LN+AA  TPDRQ AC+C+
Sbjct: 21  APLAQGAISCGQITSALAPCIAYLKGNGAGSAPPACCNGIRSLNSAAKTTPDRQAACSCI 80

Query: 183 KQAAAGISGINPGKAVGLPGRCGVSIPYQISPSTDCTRVR 302
           K AA GISGIN   A GLPG+CG++IPY+ISPSTDC  ++
Sbjct: 81  KSAATGISGINYSTAAGLPGKCGINIPYKISPSTDCKSIK 120


>gb|AEN70916.1| lipid transfer protein [Gossypium laxum]
          Length = 120

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
 Frame = +3

Query: 6   APYAEAAISCGFVVSKLSPCIPYLSG-GAAFPPPACCSGVRALNAAAIGTPDRQTACNCL 182
           AP A+ A++CG V + L+PCI YL G GAA  PP CC G+++LN+AA  TPDRQ AC C+
Sbjct: 21  APLAQGAVTCGQVTTSLAPCITYLRGNGAAAVPPGCCGGIKSLNSAAQTTPDRQAACKCI 80

Query: 183 KQAAAGISGINPGKAVGLPGRCGVSIPYQISPSTDCTR 296
           K AAAGISGIN G A GLPG+CGV+IPY+ISPSTDC R
Sbjct: 81  KSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNR 118


>gb|AAC00499.1| lipid transfer protein precursor [Gossypium hirsutum]
          Length = 120

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6   APYAEAAISCGFVVSKLSPCIPYLSG-GAAFPPPACCSGVRALNAAAIGTPDRQTACNCL 182
           AP A+ A++CG V S L+PCI YL+G GA   PP CC G+++LN+AA  TPDRQ AC C+
Sbjct: 21  APLAQGAVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAAQTTPDRQAACKCI 80

Query: 183 KQAAAGISGINPGKAVGLPGRCGVSIPYQISPSTDCTRVR 302
           K AAAGISGIN G A GLPG+CGV+IPY+ISPSTDC  V+
Sbjct: 81  KSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNSVK 120


>gb|ADY68821.1| lipid transfer protein 3 [Gossypium raimondii]
           gi|324984081|gb|ADY68823.1| lipid transfer protein 3
           [Gossypium barbadense] gi|324984085|gb|ADY68825.1| lipid
           transfer protein 3 [Gossypium hirsutum]
           gi|345104201|gb|AEN70922.1| lipid transfer protein
           [Gossypium darwinii] gi|345104213|gb|AEN70928.1| lipid
           transfer protein [Gossypium barbadense var. peruvianum]
           gi|345104217|gb|AEN70930.1| lipid transfer protein
           [Gossypium hirsutum subsp. latifolium]
          Length = 120

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
 Frame = +3

Query: 6   APYAEAAISCGFVVSKLSPCIPYLSG-GAAFPPPACCSGVRALNAAAIGTPDRQTACNCL 182
           AP A+ A++CG V S L+PCI YL+G GA   PP CC G+++LN+AA  TPDRQ AC C+
Sbjct: 21  APLAQGAVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAAQTTPDRQAACKCI 80

Query: 183 KQAAAGISGINPGKAVGLPGRCGVSIPYQISPSTDCTR 296
           K AAAGISGIN G A GLPG+CGV+IPY+ISPSTDC R
Sbjct: 81  KSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNR 118


>gb|ABO42261.1| lipid transfer protein 4 precursor [Gossypium hirsutum]
           gi|208427029|gb|ACI26696.1| lipid transfer protein
           [Gossypium hirsutum]
          Length = 120

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6   APYAEAAISCGFVVSKLSPCIPYLSG-GAAFPPPACCSGVRALNAAAIGTPDRQTACNCL 182
           AP A+ A++CG V S L+PCI YL+G GA   PP CC G+++LN+AA  TPDRQ AC C+
Sbjct: 21  APLAQGAVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAAQTTPDRQAACKCI 80

Query: 183 KQAAAGISGINPGKAVGLPGRCGVSIPYQISPSTDCTRVR 302
           K AAAGISGIN G A GLPG+CGV+IPY+ISPSTDC  V+
Sbjct: 81  KSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNSVK 120


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