BLASTX nr result

ID: Coptis21_contig00004193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004193
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...   621   e-175
emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           620   e-175
ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tR...   619   e-175
ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vi...   619   e-175
emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]   617   e-174

>ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 387

 Score =  621 bits (1602), Expect = e-175
 Identities = 303/388 (78%), Positives = 336/388 (86%), Gaps = 2/388 (0%)
 Frame = +2

Query: 23   EQDDKIPSNELQSLSFVNTXXXXXXXXXXXXXXXXXXLTLEERFKIVRSIGEECIQEDEL 202
            E   + PS +LQSLS  +                   L+LEE+++IVRS+GEECIQEDEL
Sbjct: 4    EAPTQAPSEDLQSLSVSDAKVQEPACSSNSSNQ----LSLEEKYQIVRSVGEECIQEDEL 59

Query: 203  MNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKLVSAGCRVKIWVADWFAQLNNKMG 382
             NLL+KKP+P+ YDGFEPSGRMHIAQG++K INVNKL SAGCRVKIW+ADWFAQLNNKMG
Sbjct: 60   RNLLDKKPEPVCYDGFEPSGRMHIAQGVMKAINVNKLTSAGCRVKIWIADWFAQLNNKMG 119

Query: 383  GDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSEEINSRAHEYWPLVMDIARRNKLPR 556
            GDLKKI T+G YLIEIWKA GM+L+G  VEFLWSS+EINSRA EYWPLVMDIARRNKLPR
Sbjct: 120  GDLKKIETVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINSRAGEYWPLVMDIARRNKLPR 179

Query: 557  IVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK 736
            I+RC QIMGRNEQD+L+AAQI YPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK
Sbjct: 180  IIRCSQIMGRNEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK 239

Query: 737  RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPNIVNGNPC 916
            RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MED+EAEVN+KIKKAYCPP IV GNPC
Sbjct: 240  RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDDEAEVNLKIKKAYCPPLIVEGNPC 299

Query: 917  LEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVVDYEEEKLHPADLKPALSKALNKI 1096
            LEY+KY+IFP F +F VER  D+GGNKTF++FEELV DY   +LHP DLKPALSKALNKI
Sbjct: 300  LEYIKYLIFPWFKEFTVERNADHGGNKTFSTFEELVSDYAAGELHPGDLKPALSKALNKI 359

Query: 1097 LQPVRDHFKNDPKAKDLLKKVKAYRVTR 1180
            L+PVRDHFKND  AKDLLK+VKAYRVTR
Sbjct: 360  LEPVRDHFKNDSNAKDLLKRVKAYRVTR 387


>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  620 bits (1598), Expect = e-175
 Identities = 288/351 (82%), Positives = 326/351 (92%), Gaps = 2/351 (0%)
 Frame = +2

Query: 134  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 313
            ++LEE+FKIVRSIGEECIQEDELMNLL KKPQP+ YDGFEPSGRMHIAQG+LK +NVNKL
Sbjct: 58   MSLEEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGRMHIAQGVLKALNVNKL 117

Query: 314  VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSEE 487
             SAGC+VKIW+ADWFAQLNNKMGGDLKKI  +G+YLIEIWKA GMNL+G  VEFLWSS+E
Sbjct: 118  TSAGCKVKIWIADWFAQLNNKMGGDLKKIEVVGQYLIEIWKAVGMNLEGGHVEFLWSSKE 177

Query: 488  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 667
            INSRAHEYWPLVMD+ARRNKLPRI+RCCQIMGR+EQD+L+AAQIFYPCMQCADIFFLKAD
Sbjct: 178  INSRAHEYWPLVMDVARRNKLPRILRCCQIMGRSEQDELTAAQIFYPCMQCADIFFLKAD 237

Query: 668  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 847
            ICQLGMDQRKVNVLAREYCDDI+RKNKPIILSHHMLPGLQ+GQEKMSKSDPSSSIYMEDE
Sbjct: 238  ICQLGMDQRKVNVLAREYCDDIRRKNKPIILSHHMLPGLQEGQEKMSKSDPSSSIYMEDE 297

Query: 848  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 1027
            EA+VN+KIKKA+CPP +V  NPCLEY+KYI+ P F +F++ER  +NG +KT+ +FEEL  
Sbjct: 298  EADVNLKIKKAFCPPKVVEKNPCLEYIKYIVLPWFNEFKIERSAENGADKTYKNFEELAA 357

Query: 1028 DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 1180
            DYE   LHPADLKPALSKA+NKILQPVRDHFKND KAKDL+K+VK+++VTR
Sbjct: 358  DYESGNLHPADLKPALSKAINKILQPVRDHFKNDQKAKDLMKRVKSFKVTR 408


>ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis
            sativus]
          Length = 387

 Score =  619 bits (1597), Expect = e-175
 Identities = 302/388 (77%), Positives = 335/388 (86%), Gaps = 2/388 (0%)
 Frame = +2

Query: 23   EQDDKIPSNELQSLSFVNTXXXXXXXXXXXXXXXXXXLTLEERFKIVRSIGEECIQEDEL 202
            E   + PS +LQSLS  +                   L+LEE+++IVRS+GEECIQEDEL
Sbjct: 4    EAPTQAPSEDLQSLSVSDAKVQEPACSSNSSNQ----LSLEEKYQIVRSVGEECIQEDEL 59

Query: 203  MNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKLVSAGCRVKIWVADWFAQLNNKMG 382
             NLL+KKP+P+ YDGFEPSGRMHIAQG++K INVNKL SAGCRVKIW+ADWFAQLNNKMG
Sbjct: 60   RNLLDKKPEPVCYDGFEPSGRMHIAQGVMKAINVNKLTSAGCRVKIWIADWFAQLNNKMG 119

Query: 383  GDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSEEINSRAHEYWPLVMDIARRNKLPR 556
            GDLKKI T+G YLIEIWKA GM+L+G  VEFLWSS+EINSRA EYWPLVMDIARRNKLPR
Sbjct: 120  GDLKKIETVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINSRAGEYWPLVMDIARRNKLPR 179

Query: 557  IVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK 736
            I+RC QIMGRNEQD+L+AAQI YPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK
Sbjct: 180  IIRCSQIMGRNEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK 239

Query: 737  RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPNIVNGNPC 916
            RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MED+EAEVN+KIKKAYCPP IV GNPC
Sbjct: 240  RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDDEAEVNLKIKKAYCPPLIVEGNPC 299

Query: 917  LEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVVDYEEEKLHPADLKPALSKALNKI 1096
            LEY+KY+ FP F +F VER  D+GGNKTF++FEELV DY   +LHP DLKPALSKALNKI
Sbjct: 300  LEYIKYLXFPWFKEFTVERNADHGGNKTFSTFEELVSDYAAGELHPGDLKPALSKALNKI 359

Query: 1097 LQPVRDHFKNDPKAKDLLKKVKAYRVTR 1180
            L+PVRDHFKND  AKDLLK+VKAYRVTR
Sbjct: 360  LEPVRDHFKNDSNAKDLLKRVKAYRVTR 387


>ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vinifera]
            gi|297742518|emb|CBI34667.3| unnamed protein product
            [Vitis vinifera]
          Length = 385

 Score =  619 bits (1596), Expect = e-175
 Identities = 294/351 (83%), Positives = 323/351 (92%), Gaps = 2/351 (0%)
 Frame = +2

Query: 134  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 313
            +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI+VNKL
Sbjct: 35   MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTISVNKL 94

Query: 314  VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSEE 487
             SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA GM+LDG  VEFLWSS+E
Sbjct: 95   TSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKE 154

Query: 488  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 667
            IN+RAHEYWP VMDIARRNKLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLKAD
Sbjct: 155  INARAHEYWPRVMDIARRNKLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKAD 214

Query: 668  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 847
            ICQLGMDQRKVNVLAREYCDDIK KNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDE
Sbjct: 215  ICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDE 274

Query: 848  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 1027
            EAEVNVKIKKAYCPP +V GNPCLEYV YIIFP F +F+VER+ +NGG+K F S+EEL+ 
Sbjct: 275  EAEVNVKIKKAYCPPKVVEGNPCLEYVNYIIFPWFNEFKVERKAENGGDKIFKSYEELIA 334

Query: 1028 DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 1180
            DYE  +LHP DLKP+LSKALNKILQPVRDHF ND  AKDLLK+VKAYRVTR
Sbjct: 335  DYENGELHPGDLKPSLSKALNKILQPVRDHFANDSNAKDLLKRVKAYRVTR 385


>emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]
          Length = 385

 Score =  617 bits (1592), Expect = e-174
 Identities = 293/351 (83%), Positives = 323/351 (92%), Gaps = 2/351 (0%)
 Frame = +2

Query: 134  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 313
            +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI+VNKL
Sbjct: 35   MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTISVNKL 94

Query: 314  VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSEE 487
             SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA GM+LDG  VEFLWSS+E
Sbjct: 95   TSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKE 154

Query: 488  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 667
            IN+RAHEYWP VMDIARRNKLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLKAD
Sbjct: 155  INARAHEYWPRVMDIARRNKLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKAD 214

Query: 668  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 847
            ICQLGMDQRKVNVLAREYCDDIK KNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDE
Sbjct: 215  ICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDE 274

Query: 848  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 1027
            EAEVNVKIKKAYCPP +V GNPCLEYV YIIFP F +F+VER+ +NGG+K F S++EL+ 
Sbjct: 275  EAEVNVKIKKAYCPPKVVEGNPCLEYVNYIIFPWFNEFKVERKAENGGDKIFKSYKELIA 334

Query: 1028 DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 1180
            DYE  +LHP DLKP+LSKALNKILQPVRDHF ND  AKDLLK+VKAYRVTR
Sbjct: 335  DYENGELHPGDLKPSLSKALNKILQPVRDHFANDSNAKDLLKRVKAYRVTR 385


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