BLASTX nr result

ID: Coptis21_contig00004182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004182
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycin...   103   4e-20
ref|XP_002516608.1| conserved hypothetical protein [Ricinus comm...   102   1e-19
ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|2...   101   3e-19
ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268...    99   2e-18
emb|CBI28118.3| unnamed protein product [Vitis vinifera]               90   7e-16

>ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycine max]
           gi|255640675|gb|ACU20622.1| unknown [Glycine max]
          Length = 212

 Score =  103 bits (258), Expect = 4e-20
 Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 39/188 (20%)
 Frame = +1

Query: 160 MDPKKSSLNPYASSYIPLCKRG------------------------KGSENRP------- 246
           M P+ SSLNPYA+SY+PL KRG                        +G+ N P       
Sbjct: 1   MKPQSSSLNPYATSYVPLSKRGVDGRTPSTEKDSKTYNGTVWFQTHQGATNDPQLINTSL 60

Query: 247 -------AYVYPGDSVGDDKTSLTKHPAIHKRWTNGNLNEESEMDLAILSSNYPGVSDQS 405
                  +++  G       T  T    + +   N  L+EE +MDL  L  N+PG+S QS
Sbjct: 61  ERLSKSESFLAKGQPASSSYTGYTSSQNVAELSDNQLLDEEVDMDLEYLRMNFPGISYQS 120

Query: 406 IADVYFANAGDLESSLDMLKQLEFPA-EFDQCLPDTLDIGDVADFGSSAEVTTVIPKAIL 582
           + DVY  N+GDL++++DML QLE    E    LP+TLDIGDV++ G  A+  ++  K + 
Sbjct: 121 LVDVYNVNSGDLDAAIDMLSQLELEGDETSGILPETLDIGDVSESGLPADSASLKQKNVA 180

Query: 583 GETSGSSS 606
            ET+ SSS
Sbjct: 181 EETNTSSS 188


>ref|XP_002516608.1| conserved hypothetical protein [Ricinus communis]
           gi|223544428|gb|EEF45949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score =  102 bits (255), Expect = 1e-19
 Identities = 70/184 (38%), Positives = 93/184 (50%), Gaps = 34/184 (18%)
 Frame = +1

Query: 160 MDPKKSSLNPYASSYIPLCKR-GKGSENRPAYVYPGDSVGD-----------------DK 285
           M P  S LNPYA+SY+PL KR   G    P         GD                 +K
Sbjct: 1   MKPGVSRLNPYAASYVPLSKREAAGKTEVPGLTTKSSHAGDQTIWFGPAEHTTQKKQHEK 60

Query: 286 T-----SLTKHPAIHKRWTNGNLNEESEMD----------LAILSSNYPGVSDQSIADVY 420
           T     S+ K    H  + + + N +   +          L  L +++PGVSD+S+ DVY
Sbjct: 61  TSDYDLSVLKSHTFHVAYGSSSQNPDDLTEKQTVNEDYDILEFLQASFPGVSDESLNDVY 120

Query: 421 FANAGDLESSLDMLKQLEFPA-EFDQCLPDTLDIGDVADFGSSAEVTTVIPKAILGETSG 597
            AN  DLE+++DML  LEF   E+ + LPDTLDIGDV++ GS AE  +V  K + GE S 
Sbjct: 121 KANKCDLEATIDMLNHLEFDTFEYSENLPDTLDIGDVSELGSLAECASVKLKNVAGEASA 180

Query: 598 SSSG 609
           SSSG
Sbjct: 181 SSSG 184


>ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|222854610|gb|EEE92157.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  101 bits (251), Expect = 3e-19
 Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 34/181 (18%)
 Frame = +1

Query: 175 SSLNPYASSYIPLCKRGK--------------------GSENRPAYVYPGDS--VGDDKT 288
           S+LNPYA++YIPL KR                      GS    A +   D   +   + 
Sbjct: 7   STLNPYAAAYIPLSKRDSADRIENPGWTVQGGNPNVWYGSAKHNAQIRQNDKGPISVPEM 66

Query: 289 SLTKHPAIHKRWTNG-----------NLNEESEMDLAILSSNYPGVSDQSIADVYFANAG 435
           S+ K  + +  + +            N++EE EMDL  L  N+PG+SD+S+  VY AN G
Sbjct: 67  SMLKSQSGYGSYGSSSQNSYEMTGKQNVDEEFEMDLEYLRINFPGISDESLTGVYMANKG 126

Query: 436 DLESSLDMLKQLEFPA-EFDQCLPDTLDIGDVADFGSSAEVTTVIPKAILGETSGSSSGA 612
           D+++++DML QLEF   E    LPDTLDIGDV +   SAE ++V PK ++ E S SS  +
Sbjct: 127 DIDAAIDMLNQLEFDTLESSGNLPDTLDIGDVYEPRPSAEASSVKPKTVVDEASASSGSS 186

Query: 613 S 615
           +
Sbjct: 187 A 187


>ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268154 isoform 1 [Vitis
           vinifera]
          Length = 198

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 70/186 (37%), Positives = 96/186 (51%), Gaps = 42/186 (22%)
 Frame = +1

Query: 175 SSLNPYASSYIPLCKRGKGSENRPAYV--------------YPGDSVGDDKTS------- 291
           SSLNP+A SYIPL KR   +E + + +              +   S G  +T        
Sbjct: 6   SSLNPFAESYIPLSKREPKNEGKTSEITAEKSPKSSGETTWFGTRSQGPKETKQIYLQSD 65

Query: 292 -------------LTKHPAIHKRWTNGN-------LNEESEMDLAILSSNYPGVSDQSIA 411
                        L     + K   N +        +E+S+MDLA L + +PG+SDQS+ 
Sbjct: 66  ASFDLNIHGIEELLIGEDFMKKGHENPSNETEKYYTDEDSQMDLAYLGTLFPGISDQSLL 125

Query: 412 DVYFANAGDLESSLDMLKQLEF-PAEFDQCLPDTLDIGDVADFGSSAEVTTVIPKAILGE 588
           DVY AN GDLE+S+DML QLEF P +  + LP++LDIGDV+D  SSAE ++ +     GE
Sbjct: 126 DVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDIGDVSDVKSSAEGSSKLKGICPGE 185

Query: 589 TSGSSS 606
             GSSS
Sbjct: 186 ACGSSS 191


>emb|CBI28118.3| unnamed protein product [Vitis vinifera]
          Length = 92

 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +1

Query: 355 MDLAILSSNYPGVSDQSIADVYFANAGDLESSLDMLKQLEF-PAEFDQCLPDTLDIGDVA 531
           MDLA L + +PG+SDQS+ DVY AN GDLE+S+DML QLEF P +  + LP++LDIGDV+
Sbjct: 1   MDLAYLGTLFPGISDQSLLDVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDIGDVS 60

Query: 532 DFGSSAEVTTVIPKAILGETSGSSS 606
           D  SSAE ++ +     GE  GSSS
Sbjct: 61  DVKSSAEGSSKLKGICPGEACGSSS 85


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