BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004173
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   118   7e-25
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   116   2e-24
emb|CBI24846.3| unnamed protein product [Vitis vinifera]              115   6e-24
ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis v...   115   6e-24
gb|AFK35906.1| unknown [Lotus japonicus]                              114   8e-24

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  118 bits (295), Expect = 7e-25
 Identities = 56/66 (84%), Positives = 64/66 (96%)
 Frame = -2

Query: 549 KKKKGEGEFYEADKEEKNVLPQGKKDDQKAVDSSLLKSIESVPELKAYLAARFSLKSGMK 370
           KKKKGEGEF+EA+K+EKNVLPQ KKDDQK VD++L+KSIE+VPELKAYLAARFSLK+GMK
Sbjct: 168 KKKKGEGEFFEAEKDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMK 227

Query: 369 PHELVF 352
           PHELVF
Sbjct: 228 PHELVF 233


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/66 (83%), Positives = 63/66 (95%)
 Frame = -2

Query: 549 KKKKGEGEFYEADKEEKNVLPQGKKDDQKAVDSSLLKSIESVPELKAYLAARFSLKSGMK 370
           +KKKGEGEF+EA+KEEKNVLPQ KKDDQK +D++L+KSIE VPELKAYLAARFSLK+GMK
Sbjct: 166 RKKKGEGEFFEAEKEEKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMK 225

Query: 369 PHELVF 352
           PHELVF
Sbjct: 226 PHELVF 231


>emb|CBI24846.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  115 bits (287), Expect = 6e-24
 Identities = 55/66 (83%), Positives = 61/66 (92%)
 Frame = -2

Query: 549 KKKKGEGEFYEADKEEKNVLPQGKKDDQKAVDSSLLKSIESVPELKAYLAARFSLKSGMK 370
           KKKKGEGEF+EADKEEK+VLPQ KKDDQKAVD+ L+KSIE VP+LK YL ARFSLK+GMK
Sbjct: 141 KKKKGEGEFFEADKEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMK 200

Query: 369 PHELVF 352
           PHELVF
Sbjct: 201 PHELVF 206


>ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis vinifera]
          Length = 233

 Score =  115 bits (287), Expect = 6e-24
 Identities = 55/66 (83%), Positives = 61/66 (92%)
 Frame = -2

Query: 549 KKKKGEGEFYEADKEEKNVLPQGKKDDQKAVDSSLLKSIESVPELKAYLAARFSLKSGMK 370
           KKKKGEGEF+EADKEEK+VLPQ KKDDQKAVD+ L+KSIE VP+LK YL ARFSLK+GMK
Sbjct: 168 KKKKGEGEFFEADKEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMK 227

Query: 369 PHELVF 352
           PHELVF
Sbjct: 228 PHELVF 233


>gb|AFK35906.1| unknown [Lotus japonicus]
          Length = 233

 Score =  114 bits (286), Expect = 8e-24
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -2

Query: 549 KKKKGEGEFYEADKEEKNVLPQGKKDDQKAVDSSLLKSIESVPELKAYLAARFSLKSGMK 370
           KKKKGEGEF+EA+KEEKN LPQ KKDDQK VDSSL+ +IE VPELKAYL ARFSLKSGMK
Sbjct: 168 KKKKGEGEFFEAEKEEKNALPQEKKDDQKTVDSSLITAIEGVPELKAYLGARFSLKSGMK 227

Query: 369 PHELVF 352
           PHEL+F
Sbjct: 228 PHELLF 233