BLASTX nr result

ID: Coptis21_contig00004129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004129
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis v...   331   1e-88
ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] ...   322   6e-86
gb|AAM61603.1| unknown [Arabidopsis thaliana]                         321   1e-85
ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu...   315   1e-83

>ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera]
           gi|297738884|emb|CBI28129.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  331 bits (849), Expect = 1e-88
 Identities = 168/267 (62%), Positives = 193/267 (72%)
 Frame = +1

Query: 37  RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216
           RS++R SLD+SGA AGF V++ H   GYRYGA          KLTK GE+KKR +DADFK
Sbjct: 21  RSFRRKSLDLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLTSSKLTKFGEEKKRLVDADFK 80

Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396
           +GGQRNW QVL NSGIS VL +IL  LTGW+DKCLDSK+S ++T LIGGIIGHY+CCNGD
Sbjct: 81  EGGQRNWKQVLFNSGISAVLALILWRLTGWQDKCLDSKESSLITSLIGGIIGHYSCCNGD 140

Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576
           TWSSE+G+LS+SQPRLITTFKPVR+                        FVL G FTTKC
Sbjct: 141 TWSSELGILSDSQPRLITTFKPVRKGTNGGVTKTGLLAATAAGGVIGLTFVLIGFFTTKC 200

Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756
           +SD A+KQLLVIPL+AVAGLCGSLIDSLLGAT+QYSGFCSVRN            ISG+S
Sbjct: 201 ASDVALKQLLVIPLSAVAGLCGSLIDSLLGATLQYSGFCSVRNKVVGKPGPTVRKISGIS 260

Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837
           ILDNN VNL+SI       S+ACLYIF
Sbjct: 261 ILDNNGVNLVSILLTSMLTSIACLYIF 287


>ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334187781|ref|NP_001190343.1| uncharacterized protein
           [Arabidopsis thaliana] gi|110738248|dbj|BAF01053.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005384|gb|AED92767.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332005385|gb|AED92768.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 288

 Score =  322 bits (826), Expect = 6e-86
 Identities = 161/267 (60%), Positives = 191/267 (71%)
 Frame = +1

Query: 37  RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216
           RSYKR SLD+SG +AGFLVM+ H  AG+RYGA          KLTK+GEDKKR +D +FK
Sbjct: 22  RSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFK 81

Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396
           +GGQRNW+QVL NSGI+ VLVVI   LTGWKDKCLDSK S +VT LIGGIIGHYACCNGD
Sbjct: 82  EGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGD 141

Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576
           TWSSE+G+LS++QPRLITTFKPV++                        F++ GLFT  C
Sbjct: 142 TWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASC 201

Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756
           +SD A+KQLLVIPL+A+AGLCGSLIDS+LGAT+Q+SGFCSVRN            ISG+ 
Sbjct: 202 ASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVD 261

Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837
           ILDNN VN +SI       S+A +YIF
Sbjct: 262 ILDNNGVNFVSILLTSFLTSIASVYIF 288


>gb|AAM61603.1| unknown [Arabidopsis thaliana]
          Length = 288

 Score =  321 bits (823), Expect = 1e-85
 Identities = 161/267 (60%), Positives = 190/267 (71%)
 Frame = +1

Query: 37  RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216
           RSYKR SLD+SG +AGFLVM+ H  AG+RYGA          KLTK+GEDKKR +D +FK
Sbjct: 22  RSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFK 81

Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396
           +GGQRNW+QVL NSGI+ VLVVI   LTGWKDKCLDSK S +VT LIGGIIGHYACCNGD
Sbjct: 82  EGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGD 141

Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576
           TWSSE+G+LS++QPRLITTFKPV++                        F++ GLFT  C
Sbjct: 142 TWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASC 201

Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756
           +SD A+KQLLVIPL A+AGLCGSLIDS+LGAT+Q+SGFCSVRN            ISG+ 
Sbjct: 202 ASDVALKQLLVIPLFALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVD 261

Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837
           ILDNN VN +SI       S+A +YIF
Sbjct: 262 ILDNNGVNFVSILLTSFLTSIASVYIF 288


>ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  320 bits (820), Expect = 3e-85
 Identities = 161/267 (60%), Positives = 191/267 (71%)
 Frame = +1

Query: 37  RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216
           ++Y+R SLD++GA+AGF+VM+ H A  YR+GA          KLTK+GEDKKR  DA+FK
Sbjct: 21  KAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAILLVFFFSSSKLTKVGEDKKRRFDAEFK 80

Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396
           +GGQRNWIQVLANSGI+ VLV+ +G L GW+DKCLD K+S V+T LIGGIIG Y+CCNGD
Sbjct: 81  EGGQRNWIQVLANSGIASVLVLAVGRLAGWEDKCLDGKESAVITSLIGGIIGQYSCCNGD 140

Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576
           TWSSE+G+LS++QPRLITTFKPVRR                        FVL G FTTKC
Sbjct: 141 TWSSELGVLSDAQPRLITTFKPVRRGANGGVTLAGLLAAAAAGGVIGLAFVLIGFFTTKC 200

Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756
             D A+KQLLVIP+AA+AGLCGSLIDSLLGAT+Q+SGFC+VRN            ISGL 
Sbjct: 201 VFDVALKQLLVIPVAALAGLCGSLIDSLLGATLQFSGFCTVRNKVVGKPGPTVRKISGLD 260

Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837
           ILDNNAVNL+SI       SV C YIF
Sbjct: 261 ILDNNAVNLVSILLTALLTSVGCAYIF 287


>ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]
           gi|449508273|ref|XP_004163269.1| PREDICTED:
           transmembrane protein 19-like [Cucumis sativus]
          Length = 287

 Score =  315 bits (806), Expect = 1e-83
 Identities = 158/267 (59%), Positives = 189/267 (70%)
 Frame = +1

Query: 37  RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216
           R+Y+R SL++SGALAGF+VMS H A  YRYGA          KLTK+GE+KKR +DADFK
Sbjct: 21  RAYRRKSLNLSGALAGFIVMSTHFAINYRYGAVLLVFFFTSSKLTKVGEEKKRVVDADFK 80

Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396
           +GGQRNWIQV+ NSGI+ VL VI+  +TG +DKCLDSKDS +VT LIGGI+GHY+CCNGD
Sbjct: 81  EGGQRNWIQVVFNSGIATVLAVIIWKITGGQDKCLDSKDSALVTALIGGILGHYSCCNGD 140

Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576
           TWSSE+G+LS++ PRLIT FKPVR+                        FVL G FTTKC
Sbjct: 141 TWSSELGILSDATPRLITNFKPVRKGTNGAVTNAGLLAATAAGAVIGLTFVLLGFFTTKC 200

Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756
                +KQLLVIPLAAVAGLCGS+IDSLLGAT+Q+SGFC+VRN            ISGL+
Sbjct: 201 DYGTTLKQLLVIPLAAVAGLCGSVIDSLLGATVQFSGFCTVRNKVVGKPGPTVKKISGLN 260

Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837
           ILDNN VNL+S+       S AC+YIF
Sbjct: 261 ILDNNGVNLVSVLLTTMLTSTACIYIF 287


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