BLASTX nr result
ID: Coptis21_contig00004129
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004129 (896 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis v... 331 1e-88 ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] ... 322 6e-86 gb|AAM61603.1| unknown [Arabidopsis thaliana] 321 1e-85 ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2... 320 3e-85 ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu... 315 1e-83 >ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera] gi|297738884|emb|CBI28129.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 331 bits (849), Expect = 1e-88 Identities = 168/267 (62%), Positives = 193/267 (72%) Frame = +1 Query: 37 RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216 RS++R SLD+SGA AGF V++ H GYRYGA KLTK GE+KKR +DADFK Sbjct: 21 RSFRRKSLDLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLTSSKLTKFGEEKKRLVDADFK 80 Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396 +GGQRNW QVL NSGIS VL +IL LTGW+DKCLDSK+S ++T LIGGIIGHY+CCNGD Sbjct: 81 EGGQRNWKQVLFNSGISAVLALILWRLTGWQDKCLDSKESSLITSLIGGIIGHYSCCNGD 140 Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576 TWSSE+G+LS+SQPRLITTFKPVR+ FVL G FTTKC Sbjct: 141 TWSSELGILSDSQPRLITTFKPVRKGTNGGVTKTGLLAATAAGGVIGLTFVLIGFFTTKC 200 Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756 +SD A+KQLLVIPL+AVAGLCGSLIDSLLGAT+QYSGFCSVRN ISG+S Sbjct: 201 ASDVALKQLLVIPLSAVAGLCGSLIDSLLGATLQYSGFCSVRNKVVGKPGPTVRKISGIS 260 Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837 ILDNN VNL+SI S+ACLYIF Sbjct: 261 ILDNNGVNLVSILLTSMLTSIACLYIF 287 >ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] gi|334187781|ref|NP_001190343.1| uncharacterized protein [Arabidopsis thaliana] gi|110738248|dbj|BAF01053.1| hypothetical protein [Arabidopsis thaliana] gi|332005384|gb|AED92767.1| uncharacterized protein [Arabidopsis thaliana] gi|332005385|gb|AED92768.1| uncharacterized protein [Arabidopsis thaliana] Length = 288 Score = 322 bits (826), Expect = 6e-86 Identities = 161/267 (60%), Positives = 191/267 (71%) Frame = +1 Query: 37 RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216 RSYKR SLD+SG +AGFLVM+ H AG+RYGA KLTK+GEDKKR +D +FK Sbjct: 22 RSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFK 81 Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396 +GGQRNW+QVL NSGI+ VLVVI LTGWKDKCLDSK S +VT LIGGIIGHYACCNGD Sbjct: 82 EGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGD 141 Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576 TWSSE+G+LS++QPRLITTFKPV++ F++ GLFT C Sbjct: 142 TWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASC 201 Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756 +SD A+KQLLVIPL+A+AGLCGSLIDS+LGAT+Q+SGFCSVRN ISG+ Sbjct: 202 ASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVD 261 Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837 ILDNN VN +SI S+A +YIF Sbjct: 262 ILDNNGVNFVSILLTSFLTSIASVYIF 288 >gb|AAM61603.1| unknown [Arabidopsis thaliana] Length = 288 Score = 321 bits (823), Expect = 1e-85 Identities = 161/267 (60%), Positives = 190/267 (71%) Frame = +1 Query: 37 RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216 RSYKR SLD+SG +AGFLVM+ H AG+RYGA KLTK+GEDKKR +D +FK Sbjct: 22 RSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFK 81 Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396 +GGQRNW+QVL NSGI+ VLVVI LTGWKDKCLDSK S +VT LIGGIIGHYACCNGD Sbjct: 82 EGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGD 141 Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576 TWSSE+G+LS++QPRLITTFKPV++ F++ GLFT C Sbjct: 142 TWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASC 201 Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756 +SD A+KQLLVIPL A+AGLCGSLIDS+LGAT+Q+SGFCSVRN ISG+ Sbjct: 202 ASDVALKQLLVIPLFALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVD 261 Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837 ILDNN VN +SI S+A +YIF Sbjct: 262 ILDNNGVNFVSILLTSFLTSIASVYIF 288 >ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1| predicted protein [Populus trichocarpa] Length = 287 Score = 320 bits (820), Expect = 3e-85 Identities = 161/267 (60%), Positives = 191/267 (71%) Frame = +1 Query: 37 RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216 ++Y+R SLD++GA+AGF+VM+ H A YR+GA KLTK+GEDKKR DA+FK Sbjct: 21 KAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAILLVFFFSSSKLTKVGEDKKRRFDAEFK 80 Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396 +GGQRNWIQVLANSGI+ VLV+ +G L GW+DKCLD K+S V+T LIGGIIG Y+CCNGD Sbjct: 81 EGGQRNWIQVLANSGIASVLVLAVGRLAGWEDKCLDGKESAVITSLIGGIIGQYSCCNGD 140 Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576 TWSSE+G+LS++QPRLITTFKPVRR FVL G FTTKC Sbjct: 141 TWSSELGVLSDAQPRLITTFKPVRRGANGGVTLAGLLAAAAAGGVIGLAFVLIGFFTTKC 200 Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756 D A+KQLLVIP+AA+AGLCGSLIDSLLGAT+Q+SGFC+VRN ISGL Sbjct: 201 VFDVALKQLLVIPVAALAGLCGSLIDSLLGATLQFSGFCTVRNKVVGKPGPTVRKISGLD 260 Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837 ILDNNAVNL+SI SV C YIF Sbjct: 261 ILDNNAVNLVSILLTALLTSVGCAYIF 287 >ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus] gi|449508273|ref|XP_004163269.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus] Length = 287 Score = 315 bits (806), Expect = 1e-83 Identities = 158/267 (59%), Positives = 189/267 (70%) Frame = +1 Query: 37 RSYKRNSLDISGALAGFLVMSGHIAAGYRYGAXXXXXXXXXXKLTKIGEDKKRTIDADFK 216 R+Y+R SL++SGALAGF+VMS H A YRYGA KLTK+GE+KKR +DADFK Sbjct: 21 RAYRRKSLNLSGALAGFIVMSTHFAINYRYGAVLLVFFFTSSKLTKVGEEKKRVVDADFK 80 Query: 217 QGGQRNWIQVLANSGISMVLVVILGILTGWKDKCLDSKDSGVVTCLIGGIIGHYACCNGD 396 +GGQRNWIQV+ NSGI+ VL VI+ +TG +DKCLDSKDS +VT LIGGI+GHY+CCNGD Sbjct: 81 EGGQRNWIQVVFNSGIATVLAVIIWKITGGQDKCLDSKDSALVTALIGGILGHYSCCNGD 140 Query: 397 TWSSEIGMLSNSQPRLITTFKPVRRXXXXXXXXXXXXXXXXXXXXXXXXFVLAGLFTTKC 576 TWSSE+G+LS++ PRLIT FKPVR+ FVL G FTTKC Sbjct: 141 TWSSELGILSDATPRLITNFKPVRKGTNGAVTNAGLLAATAAGAVIGLTFVLLGFFTTKC 200 Query: 577 SSDEAVKQLLVIPLAAVAGLCGSLIDSLLGATMQYSGFCSVRNXXXXXXXXXXXXISGLS 756 +KQLLVIPLAAVAGLCGS+IDSLLGAT+Q+SGFC+VRN ISGL+ Sbjct: 201 DYGTTLKQLLVIPLAAVAGLCGSVIDSLLGATVQFSGFCTVRNKVVGKPGPTVKKISGLN 260 Query: 757 ILDNNAVNLMSIXXXXXXXSVACLYIF 837 ILDNN VNL+S+ S AC+YIF Sbjct: 261 ILDNNGVNLVSVLLTTMLTSTACIYIF 287