BLASTX nr result

ID: Coptis21_contig00004125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004125
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270683.1| PREDICTED: SNF1-related protein kinase regul...   349   6e-94
gb|AGF39570.1| beta subunit of SnRK1, partial [Solanum berthaultii]   342   7e-92
gb|AAS19201.1| GAL83 [Nicotiana attenuata]                            341   2e-91
gb|AEP68531.1| Gal83 [Solanum lycopersicum]                           340   5e-91
emb|CAB52141.1| GAL83 protein [Solanum tuberosum]                     339   8e-91

>ref|XP_002270683.1| PREDICTED: SNF1-related protein kinase regulatory subunit beta-1
           [Vitis vinifera] gi|296083943|emb|CBI24331.3| unnamed
           protein product [Vitis vinifera]
          Length = 286

 Score =  349 bits (896), Expect = 6e-94
 Identities = 163/225 (72%), Positives = 188/225 (83%), Gaps = 1/225 (0%)
 Frame = -2

Query: 931 LMFAPQLPVAPLQRGDAPPSFNHIWINDPHNSLDAPQEQGIPTLITWTYGGNTVAVQGSW 752
           LMFAPQ+P+APLQR D P S N +W N+P   ++ P EQGIP +I W YGGN VAV+GSW
Sbjct: 62  LMFAPQVPIAPLQRRDGPASLNQMWQNEPQGGVEHPPEQGIPIMIAWNYGGNDVAVEGSW 121

Query: 751 DNWTSRRILQRSGKDHSILLVLPSGIYQYRFVVDGERRYIPDLPCIADDTGLVDNLLDVH 572
           DNWTSR+ LQRSGKDHSILLVLPSG+Y Y+F+VDGE RYIPDLP IAD+ G V NLLDV+
Sbjct: 122 DNWTSRKTLQRSGKDHSILLVLPSGVYHYKFIVDGEWRYIPDLPFIADEMGRVCNLLDVN 181

Query: 571 DYVPENFEGIAEFEPPPSPDSSYGHTFPGDEDFAKEPVAVPPQLHLTLLGTQNDPEPS-T 395
           DYVPEN E +AEFE PPSP+SSY   FP +EDFAKEPV VPPQLHLT+LG  N  EPS +
Sbjct: 182 DYVPENLESVAEFEAPPSPNSSYSQAFPAEEDFAKEPVLVPPQLHLTVLGMPNSEEPSCS 241

Query: 394 KPQHVVLNHLYIDKGWPSQSLVALGFTHRFQSKYVTVVLYKPLRK 260
           KPQHVVLNHL+I+KGW SQS+VALG T+RFQSKYVTVVLYKPL++
Sbjct: 242 KPQHVVLNHLFIEKGWASQSVVALGLTNRFQSKYVTVVLYKPLKR 286


>gb|AGF39570.1| beta subunit of SnRK1, partial [Solanum berthaultii]
          Length = 285

 Score =  342 bits (878), Expect = 7e-92
 Identities = 161/226 (71%), Positives = 189/226 (83%), Gaps = 2/226 (0%)
 Frame = -2

Query: 931 LMFAPQLPVAPLQRGDAPPSFNHIWINDPHNSLDAPQEQGIPTLITWTYGGNTVAVQGSW 752
           L+F PQ+PV PLQ GD  P  N +W N+  ++ D   E GIPTLITW+YGGN VA+QGSW
Sbjct: 55  LLFGPQVPVVPLQGGDGNPVSNQMWGNECQDASDHSLEGGIPTLITWSYGGNNVAIQGSW 114

Query: 751 DNWTSRRILQRSGKDHSILLVLPSGIYQYRFVVDGERRYIPDLPCIADDTGLVDNLLDVH 572
           DNWTSR+ILQRSGKD+++LLVLPSGIY Y+ +VDGE RYIP+LPC+AD+TG+V NLLDV+
Sbjct: 115 DNWTSRKILQRSGKDYTVLLVLPSGIYHYKLIVDGEVRYIPELPCVADETGIVFNLLDVN 174

Query: 571 DYVPENFEGIAEFEPPPSPDSSYGHTFPGDEDFAKEPVAVPPQLHLTLLGTQNDPE--PS 398
           D VPEN E +AEFE PPSPDSSY  T  GDEDFAKEPVAVPPQLHLT+LG++N  E   S
Sbjct: 175 DNVPENLESVAEFEAPPSPDSSYAQTLLGDEDFAKEPVAVPPQLHLTVLGSENSEEAPSS 234

Query: 397 TKPQHVVLNHLYIDKGWPSQSLVALGFTHRFQSKYVTVVLYKPLRK 260
            KPQHVVLNHL+I+KGW SQS+VALG THRFQSKYVTVVLYKPL++
Sbjct: 235 PKPQHVVLNHLFIEKGWASQSVVALGLTHRFQSKYVTVVLYKPLKR 280


>gb|AAS19201.1| GAL83 [Nicotiana attenuata]
          Length = 287

 Score =  341 bits (874), Expect = 2e-91
 Identities = 161/226 (71%), Positives = 188/226 (83%), Gaps = 2/226 (0%)
 Frame = -2

Query: 931 LMFAPQLPVAPLQRGDAPPSFNHIWINDPHNSLDAPQEQGIPTLITWTYGGNTVAVQGSW 752
           L+F PQ+PV PLQ GD  P+ + +W ++  ++ D   E GIP LITW+YGGN VAVQGSW
Sbjct: 62  LLFGPQVPVVPLQAGDGHPATDQMWGDESQDASDHSPESGIPILITWSYGGNNVAVQGSW 121

Query: 751 DNWTSRRILQRSGKDHSILLVLPSGIYQYRFVVDGERRYIPDLPCIADDTGLVDNLLDVH 572
           DNW SR+ILQRSGKDH+ILLVLP GIY Y+FVVDGE RYIPDLPC+AD+TG+V NLLDV+
Sbjct: 122 DNWRSRKILQRSGKDHTILLVLPMGIYHYKFVVDGEVRYIPDLPCVADETGVVFNLLDVN 181

Query: 571 DYVPENFEGIAEFEPPPSPDSSYGHTFPGDEDFAKEPVAVPPQLHLTLLGTQNDPE--PS 398
           D VPEN E +AEFE PPSPDSSYG    GDEDFAK+PVAVPPQLHLT+LG++N  E   S
Sbjct: 182 DNVPENLESVAEFEAPPSPDSSYGQGLLGDEDFAKDPVAVPPQLHLTVLGSENSEETPSS 241

Query: 397 TKPQHVVLNHLYIDKGWPSQSLVALGFTHRFQSKYVTVVLYKPLRK 260
            KPQHVVLNHL+I+KGW SQS+VALG THRFQSKYVTVVLYKPL++
Sbjct: 242 PKPQHVVLNHLFIEKGWASQSVVALGLTHRFQSKYVTVVLYKPLKR 287


>gb|AEP68531.1| Gal83 [Solanum lycopersicum]
          Length = 289

 Score =  340 bits (871), Expect = 5e-91
 Identities = 159/226 (70%), Positives = 188/226 (83%), Gaps = 2/226 (0%)
 Frame = -2

Query: 931 LMFAPQLPVAPLQRGDAPPSFNHIWINDPHNSLDAPQEQGIPTLITWTYGGNTVAVQGSW 752
           L+F PQ+PV PLQ GD  P  N +W N+  ++ D   E GIPTLITW+YGGN VA+QGSW
Sbjct: 64  LLFGPQVPVVPLQGGDGNPVSNQMWGNECEDASDHSLEGGIPTLITWSYGGNNVAIQGSW 123

Query: 751 DNWTSRRILQRSGKDHSILLVLPSGIYQYRFVVDGERRYIPDLPCIADDTGLVDNLLDVH 572
           DNWTSR+ILQRSGKD+++LLVLPSGIY Y+F+VDGE RYIP+LPC+AD+TG+V NLLDV+
Sbjct: 124 DNWTSRKILQRSGKDYTVLLVLPSGIYHYKFIVDGEVRYIPELPCVADETGVVFNLLDVN 183

Query: 571 DYVPENFEGIAEFEPPPSPDSSYGHTFPGDEDFAKEPVAVPPQLHLTLLGTQNDPE--PS 398
           D VPEN E +AEFE PPSPDSSY     G+EDF KEPVAVPPQLHLT+LG++N  E   S
Sbjct: 184 DNVPENLESVAEFEAPPSPDSSYAQALMGEEDFEKEPVAVPPQLHLTVLGSENSEEAPSS 243

Query: 397 TKPQHVVLNHLYIDKGWPSQSLVALGFTHRFQSKYVTVVLYKPLRK 260
            KPQHVVLNHL+I+KGW SQS+VALG THRFQSKYVTVVLYKPL++
Sbjct: 244 PKPQHVVLNHLFIEKGWASQSIVALGLTHRFQSKYVTVVLYKPLKR 289


>emb|CAB52141.1| GAL83 protein [Solanum tuberosum]
          Length = 289

 Score =  339 bits (869), Expect = 8e-91
 Identities = 160/226 (70%), Positives = 188/226 (83%), Gaps = 2/226 (0%)
 Frame = -2

Query: 931 LMFAPQLPVAPLQRGDAPPSFNHIWINDPHNSLDAPQEQGIPTLITWTYGGNTVAVQGSW 752
           L+F PQ+PV PLQ GD  P  N +W N+  ++ D   E GIPTLITW+YGGN VA+QGSW
Sbjct: 64  LLFGPQVPVVPLQGGDGNPVSNQMWGNECEDASDHSLEGGIPTLITWSYGGNNVAIQGSW 123

Query: 751 DNWTSRRILQRSGKDHSILLVLPSGIYQYRFVVDGERRYIPDLPCIADDTGLVDNLLDVH 572
           DNWTSR+ILQRSGKD+++LLVLPSGIY Y+F+VDGE RYIP+LPC+AD+TG+V NLLDV+
Sbjct: 124 DNWTSRKILQRSGKDYTVLLVLPSGIYHYKFIVDGEVRYIPELPCVADETGVVFNLLDVN 183

Query: 571 DYVPENFEGIAEFEPPPSPDSSYGHTFPGDEDFAKEPVAVPPQLHLTLLGTQNDPE--PS 398
           D VPEN E +AEFE PPSPDSSY      DEDFAKEPVAVPPQLHLT+LG++N  E   S
Sbjct: 184 DNVPENLESVAEFEAPPSPDSSYAQALLVDEDFAKEPVAVPPQLHLTVLGSENSEEAPSS 243

Query: 397 TKPQHVVLNHLYIDKGWPSQSLVALGFTHRFQSKYVTVVLYKPLRK 260
            KPQHVVLNHL+I+KGW SQS+VALG THRFQSKYVTVVLYKPL++
Sbjct: 244 PKPQHVVLNHLFIEKGWASQSVVALGLTHRFQSKYVTVVLYKPLKR 289


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