BLASTX nr result

ID: Coptis21_contig00004103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004103
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycin...   370   e-100
ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane prot...   369   1e-99
ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm...   367   3e-99
ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane prot...   367   4e-99
gb|AFK46984.1| unknown [Medicago truncatula]                          360   4e-97

>ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycine max]
           gi|255646580|gb|ACU23764.1| unknown [Glycine max]
          Length = 274

 Score =  370 bits (951), Expect = e-100
 Identities = 181/274 (66%), Positives = 222/274 (81%)
 Frame = +1

Query: 40  MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGHWGPLVLAVAYIPL 219
           M+++W + LRI ILLL+L  + +ACFTLPI++ ++DFL W+D +LG WGPLVLAVAYIPL
Sbjct: 1   MSLSWASALRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60

Query: 220 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSAAAFLLGRTIARSYVISKLKDYPKF 399
           TVLAVPAS+              F+ADSIGAT+G+ AAFLLGRTI RS+V+S+LKDYP+F
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120

Query: 400 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 579
           ++V+IAI+RSGFKI  LLRLVPLLPFNMLNY+LSVTP+ I EY+LASWLGMMPITL LVY
Sbjct: 121 RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180

Query: 580 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDIEG 759
           VGTTLKDLSDVTHGWGE S TRW            LM+CVTKVAKA+L+KALAE+ DI+G
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTKVAKAALDKALAENEDIDG 240

Query: 760 VLAAPQLPIVADLSSDLCQPLIIKMNPPEDTHEK 861
           + ++P LPIVA+ S+DL QPLIIK++  ED+HEK
Sbjct: 241 ITSSPDLPIVAEPSADLNQPLIIKIDSSEDSHEK 274


>ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like
           [Glycine max]
          Length = 274

 Score =  369 bits (946), Expect = 1e-99
 Identities = 180/274 (65%), Positives = 221/274 (80%)
 Frame = +1

Query: 40  MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGHWGPLVLAVAYIPL 219
           M+ +W + LRI ILLL+L  + +ACFTLPI++ ++DFL W+D +LG WGPLVLAVAYIPL
Sbjct: 1   MSFSWSSTLRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60

Query: 220 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSAAAFLLGRTIARSYVISKLKDYPKF 399
           TVLAVPAS+              F+ADSIGAT+G+ AAFLLGRTI RS+V+S+LKDYP+F
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120

Query: 400 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 579
           ++V+IAI+RSGFKI  LLRLVPLLPFNMLNY+LSVTP+ I EY+LASWLGMMPITL LVY
Sbjct: 121 RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180

Query: 580 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDIEG 759
           VGTTLKDLSDVTHGWGE S TRW            LM+CVT+VAKA+L+KALAE+ DI+G
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTRVAKAALDKALAENEDIDG 240

Query: 760 VLAAPQLPIVADLSSDLCQPLIIKMNPPEDTHEK 861
           + ++P LPIVA+ S+DL QPLIIK++  ED+HEK
Sbjct: 241 ITSSPDLPIVAEPSADLNQPLIIKIDSSEDSHEK 274


>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
           gi|223543789|gb|EEF45317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  367 bits (943), Expect = 3e-99
 Identities = 185/293 (63%), Positives = 227/293 (77%), Gaps = 7/293 (2%)
 Frame = +1

Query: 4   FEEEEEEVR----KLTMTI---TWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWI 162
           +E+ EEE R    KL+ T+   TWG+ LRI +L L++  + +ACFTLP+++ L+DFL W+
Sbjct: 10  YEDNEEECRPWRRKLSSTMASMTWGSALRITLLFLLIAAVVVACFTLPVEKILKDFLLWV 69

Query: 163 DKNLGHWGPLVLAVAYIPLTVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSAAAFLL 342
           +++LG WGPLVLAVAYIPLTVLAVPAS+              F+ADSIGAT+G+ AAFLL
Sbjct: 70  EQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLL 129

Query: 343 GRTIARSYVISKLKDYPKFQAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGIT 522
           GRTI RS+VISKLKDYP+F++V+IAIQRSGFKI  LLRLVPLLPFNMLNY+LSVTP+ + 
Sbjct: 130 GRTIGRSFVISKLKDYPQFRSVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLG 189

Query: 523 EYILASWLGMMPITLVLVYVGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVT 702
           EY+LASW+GMMPITL LVYVGTTLKDLSDVTHGW + S TRW            LM CVT
Sbjct: 190 EYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWSKFSTTRWVCIVLGFVVSVVLMFCVT 249

Query: 703 KVAKASLEKALAESPDIEGVLAAPQLPIVADLSSDLCQPLIIKMNPPEDTHEK 861
           +VAK++L KALAE+ DI+ +L+ PQLPIV D S DL QPLIIK++ PED HEK
Sbjct: 250 RVAKSALAKALAENEDIDTILSTPQLPIVGDPSVDLNQPLIIKIDAPEDDHEK 302


>ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
           vinifera] gi|297736982|emb|CBI26183.3| unnamed protein
           product [Vitis vinifera]
          Length = 274

 Score =  367 bits (941), Expect = 4e-99
 Identities = 181/274 (66%), Positives = 218/274 (79%)
 Frame = +1

Query: 40  MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGHWGPLVLAVAYIPL 219
           M  +W + LRI  LLL++  I +ACFTLP+++ L+DFL WI+++LG WGPL LAVAYIPL
Sbjct: 1   MAFSWLSFLRITFLLLLIAAIAVACFTLPVEKILKDFLLWIEQDLGPWGPLALAVAYIPL 60

Query: 220 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSAAAFLLGRTIARSYVISKLKDYPKF 399
           TVLAVPAS+              F+ADSIGAT+G+ AAFLLGRTI RSYVISKLKDYP+F
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSYVISKLKDYPQF 120

Query: 400 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 579
           +AV+IAIQRSGFKI  LLRLVPLLPFNMLNY+LSVTP+ + EY+LASWLGMMPITL LVY
Sbjct: 121 RAVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPVWEYMLASWLGMMPITLALVY 180

Query: 580 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDIEG 759
           +GTTLKDLSDVTHGW E S +RW            LMVCVTKVAKA+LEKALAE+ DI+G
Sbjct: 181 IGTTLKDLSDVTHGWHEFSTSRWIFIGLGLVISVILMVCVTKVAKAALEKALAENEDIDG 240

Query: 760 VLAAPQLPIVADLSSDLCQPLIIKMNPPEDTHEK 861
           ++AAPQLPIV++ S DL QPL++K++P +D  EK
Sbjct: 241 IVAAPQLPIVSNPSLDLQQPLVVKIDPTQDNQEK 274


>gb|AFK46984.1| unknown [Medicago truncatula]
          Length = 274

 Score =  360 bits (924), Expect = 4e-97
 Identities = 176/274 (64%), Positives = 216/274 (78%)
 Frame = +1

Query: 40  MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGHWGPLVLAVAYIPL 219
           M  +W +  RI +LLL+L  + +ACFTLPI++ ++DFL W+D++LG WGPLVLAVAYIPL
Sbjct: 1   MAFSWASAFRITLLLLLLLAVIVACFTLPIEKIMKDFLLWVDRDLGAWGPLVLAVAYIPL 60

Query: 220 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSAAAFLLGRTIARSYVISKLKDYPKF 399
           TVLAVPAS+              F+ADSIGAT+G+ AAFLLGRTI R +V+S+LKDYPKF
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKF 120

Query: 400 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 579
           ++V+IAI+RSGFKI  LLRLVPLLPFNMLNY+LSVTP+ + EY+LASWLGMMPITL LVY
Sbjct: 121 KSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMPITLALVY 180

Query: 580 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDIEG 759
           VGTTLKDLSDVTHGW E S +RW            LM+CVTKVAK +L+KALAE+ DI+G
Sbjct: 181 VGTTLKDLSDVTHGWNEFSKSRWAFIIIGLIVSVVLMICVTKVAKFALDKALAENEDIDG 240

Query: 760 VLAAPQLPIVADLSSDLCQPLIIKMNPPEDTHEK 861
           V ++P+LPIVA+  SDL QPLIIK++  ED HEK
Sbjct: 241 VTSSPELPIVAEPPSDLNQPLIIKIDFTEDNHEK 274


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