BLASTX nr result

ID: Coptis21_contig00004099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004099
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284934.1| PREDICTED: coiled-coil domain-containing pro...   212   1e-52
ref|XP_002869263.1| hypothetical protein ARALYDRAFT_491462 [Arab...   196   1e-47
ref|XP_002309591.1| predicted protein [Populus trichocarpa] gi|2...   195   2e-47
ref|NP_001031771.1| paramyosin-related protein [Arabidopsis thal...   194   5e-47
ref|NP_567897.1| paramyosin-related protein [Arabidopsis thalian...   194   5e-47

>ref|XP_002284934.1| PREDICTED: coiled-coil domain-containing protein 93 [Vitis
           vinifera] gi|296081986|emb|CBI20991.3| unnamed protein
           product [Vitis vinifera]
          Length = 304

 Score =  212 bits (540), Expect = 1e-52
 Identities = 117/167 (70%), Positives = 134/167 (80%)
 Frame = -1

Query: 743 LEKLNAAKIELAVKLREVLSLKRRLDEVPCQSELAQYEQRFSELDVQIQEKFRQTRKCYA 564
           LE+LNAAK ELA +LR +L LKR+LD+VP Q+EL QYE+RFSEL V IQEK +QTRK YA
Sbjct: 137 LEELNAAKRELAGRLRAILLLKRQLDDVPSQTELIQYERRFSELYVHIQEKLQQTRKFYA 196

Query: 563 TYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGIQQKLEKVQLG 384
           TYN           ETSLLNSI SQF +AITS AGR+KLI+SMEGIVKG QQKLEKVQLG
Sbjct: 197 TYNALVEIKELMLKETSLLNSINSQFQDAITSTAGRLKLINSMEGIVKGAQQKLEKVQLG 256

Query: 383 LQNEQTLCDALKEKYNRSIAEQRRYSSLLKAFQEEHVKYERLRRQTS 243
           LQ EQ +CDALKE+++ +IAEQRR  SLLKAFQEE  K ERL+RQTS
Sbjct: 257 LQAEQKVCDALKERHSAAIAEQRRCYSLLKAFQEECTKNERLQRQTS 303


>ref|XP_002869263.1| hypothetical protein ARALYDRAFT_491462 [Arabidopsis lyrata subsp.
           lyrata] gi|297315099|gb|EFH45522.1| hypothetical protein
           ARALYDRAFT_491462 [Arabidopsis lyrata subsp. lyrata]
          Length = 310

 Score =  196 bits (498), Expect = 1e-47
 Identities = 105/169 (62%), Positives = 128/169 (75%)
 Frame = -1

Query: 749 DPLEKLNAAKIELAVKLREVLSLKRRLDEVPCQSELAQYEQRFSELDVQIQEKFRQTRKC 570
           + L+ L +AK ELA  LRE++SLKR++D+VPCQSEL QYE+RFSEL+V IQEK +QTRK 
Sbjct: 130 ESLDNLTSAKKELAAALREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKL 189

Query: 569 YATYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGIQQKLEKVQ 390
           YATYN           ETSLLNSI SQF + I +PAGR+KLIDSMEG++KGIQQK+ KVQ
Sbjct: 190 YATYNTLLEIKDLMVKETSLLNSIGSQFEDVIGTPAGRVKLIDSMEGVMKGIQQKIGKVQ 249

Query: 389 LGLQNEQTLCDALKEKYNRSIAEQRRYSSLLKAFQEEHVKYERLRRQTS 243
           LGLQ EQ L DA KEKY  + AEQR+  ++L+AFQEE  K E+LR   S
Sbjct: 250 LGLQEEQRLRDASKEKYVAAAAEQRKCYTVLRAFQEECTKNEKLRSHIS 298


>ref|XP_002309591.1| predicted protein [Populus trichocarpa] gi|222855567|gb|EEE93114.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  195 bits (495), Expect = 2e-47
 Identities = 110/169 (65%), Positives = 128/169 (75%)
 Frame = -1

Query: 749 DPLEKLNAAKIELAVKLREVLSLKRRLDEVPCQSELAQYEQRFSELDVQIQEKFRQTRKC 570
           + LEKLNAAK ELA +LR V+S+KR+L EVP QSEL QYE+ FS+++  IQEK RQTRK 
Sbjct: 127 ESLEKLNAAKKELAARLRAVMSVKRKLGEVPTQSELIQYERGFSDVNDHIQEKHRQTRKY 186

Query: 569 YATYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGIQQKLEKVQ 390
           YATYN           ETSLLNSI+SQF +AIT+  G  KLI SMEGIVKG QQKL+KV+
Sbjct: 187 YATYNTLLEIKELMLKETSLLNSISSQFQDAITTTNGCTKLIASMEGIVKGSQQKLQKVE 246

Query: 389 LGLQNEQTLCDALKEKYNRSIAEQRRYSSLLKAFQEEHVKYERLRRQTS 243
           LGLQ EQ + DALK++Y  +IAEQRR  SLLKAFQEE  K ERLR QTS
Sbjct: 247 LGLQEEQKVSDALKKRYAAAIAEQRRCYSLLKAFQEECAKNERLRGQTS 295


>ref|NP_001031771.1| paramyosin-related protein [Arabidopsis thaliana]
           gi|227202856|dbj|BAH56901.1| AT4G32560 [Arabidopsis
           thaliana] gi|332660680|gb|AEE86080.1| paramyosin-related
           protein [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 5e-47
 Identities = 103/167 (61%), Positives = 126/167 (75%)
 Frame = -1

Query: 743 LEKLNAAKIELAVKLREVLSLKRRLDEVPCQSELAQYEQRFSELDVQIQEKFRQTRKCYA 564
           L+ L +AK EL   LRE++SLKR++D+VPCQSEL QYE+RFSEL+V IQEK +QTRK YA
Sbjct: 132 LDNLTSAKKELGATLREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYA 191

Query: 563 TYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGIQQKLEKVQLG 384
           TYN           ETSLLNSI SQF + I +PAGR+KLIDSMEG++KGIQQK+ K+QLG
Sbjct: 192 TYNALLEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLG 251

Query: 383 LQNEQTLCDALKEKYNRSIAEQRRYSSLLKAFQEEHVKYERLRRQTS 243
           LQ EQ L DA KEKY  + AEQR+  ++L+A+QEE  K ERLR   S
Sbjct: 252 LQEEQRLRDASKEKYIAAAAEQRKCYTVLRAYQEECTKNERLRSHIS 298


>ref|NP_567897.1| paramyosin-related protein [Arabidopsis thaliana]
           gi|42573131|ref|NP_974662.1| paramyosin-related protein
           [Arabidopsis thaliana] gi|14334642|gb|AAK59499.1|
           unknown protein [Arabidopsis thaliana]
           gi|17104609|gb|AAL34193.1| unknown protein [Arabidopsis
           thaliana] gi|332660678|gb|AEE86078.1| paramyosin-related
           protein [Arabidopsis thaliana]
           gi|332660679|gb|AEE86079.1| paramyosin-related protein
           [Arabidopsis thaliana]
          Length = 306

 Score =  194 bits (492), Expect = 5e-47
 Identities = 103/167 (61%), Positives = 126/167 (75%)
 Frame = -1

Query: 743 LEKLNAAKIELAVKLREVLSLKRRLDEVPCQSELAQYEQRFSELDVQIQEKFRQTRKCYA 564
           L+ L +AK EL   LRE++SLKR++D+VPCQSEL QYE+RFSEL+V IQEK +QTRK YA
Sbjct: 134 LDNLTSAKKELGATLREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYA 193

Query: 563 TYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGIQQKLEKVQLG 384
           TYN           ETSLLNSI SQF + I +PAGR+KLIDSMEG++KGIQQK+ K+QLG
Sbjct: 194 TYNALLEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLG 253

Query: 383 LQNEQTLCDALKEKYNRSIAEQRRYSSLLKAFQEEHVKYERLRRQTS 243
           LQ EQ L DA KEKY  + AEQR+  ++L+A+QEE  K ERLR   S
Sbjct: 254 LQEEQRLRDASKEKYIAAAAEQRKCYTVLRAYQEECTKNERLRSHIS 300


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