BLASTX nr result

ID: Coptis21_contig00004078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004078
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776...    78   5e-12
ref|XP_002526571.1| protein with unknown function [Ricinus commu...    69   2e-09
ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|XP_004157745.1| PREDICTED: uncharacterized LOC101222251 [Cuc...    58   6e-06

>ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776739 [Glycine max]
          Length = 870

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 44/102 (43%), Positives = 68/102 (66%)
 Frame = -3

Query: 498 EQFVLDMQFLVEIMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAA 319
           +QF+LD+QFLVEI  +GGY+SS+       L++ M+S F SAG++  +DV  D WA +AA
Sbjct: 661 KQFILDVQFLVEIGMYGGYFSSD----PLLLLTLMKSTFNSAGLDPFKDVDDDYWAIDAA 716

Query: 318 NESIQKLLENEKSDLLHNEEDMSTSEEDPSTHQDVFGANSVE 193
            ++IQKLLE EK+  LH +E + T +E+   H++    ++ E
Sbjct: 717 TKTIQKLLEIEKTS-LHPKEPVVTIKEESHEHENQINQSAYE 757


>ref|XP_002526571.1| protein with unknown function [Ricinus communis]
            gi|223534132|gb|EEF35849.1| protein with unknown function
            [Ricinus communis]
          Length = 804

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
 Frame = -3

Query: 498  EQFVLDMQFLVEIMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAA 319
            +QFVLDM FLVE +++G Y+S +    ++     M+    SAG++  RD+  DGWA  AA
Sbjct: 688  DQFVLDMHFLVEAIKYGEYFSKDPLVPATL----MKEAINSAGLDPFRDIYDDGWAMKAA 743

Query: 318  NESIQKLLENEKSDLLHNE---EDMSTSEEDPSTHQDVFGANSVENVKNLLEDSTELDD 151
             E+++KLLE EK++LL  +   ED++   ++   H      ++  +  ++   S E D+
Sbjct: 744  TEAVEKLLEIEKTELLLEDEAAEDLAVPSKNHFEHASDTFQDAARSSLDIFSSSEEDDE 802


>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
            predicted protein [Populus trichocarpa]
          Length = 897

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
 Frame = -3

Query: 495  QFVLDMQFLVEIMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAAN 316
            QFVLDM FL EI+RFG Y+S+N     S   + M+SVF SAG++  RD   DGW   AA 
Sbjct: 651  QFVLDMHFLAEIIRFGDYFSTN----PSVPATLMKSVFDSAGLDPTRDA-DDGWIMKAAI 705

Query: 315  ESIQKLLENEKSDLLHNEEDMSTS-EEDPSTHQDVFGANSVENVKNLLEDSTELDDGLTS 139
            E+I++L++ E+++   ++E +    EE P  H +       ++     EDS  L++   +
Sbjct: 706  EAIERLVKIEETESPSDDELVGIPVEEPPENHSEHASETVNDDGTYFSEDSLMLEENAAT 765

Query: 138  NAA 130
              A
Sbjct: 766  TGA 768


>ref|XP_004157745.1| PREDICTED: uncharacterized LOC101222251 [Cucumis sativus]
          Length = 773

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
 Frame = -3

Query: 498  EQFVLDMQFLVEIMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAA 319
            +Q +LDM F VEI RF GY S  +   +SA+I+R    F + G++    +  D W    A
Sbjct: 646  QQLILDMHFTVEIARFAGYPSRQIHQIASAIIARAIRTFSARGIDPQSALPEDEWFVETA 705

Query: 318  NESIQKLLENEKSD--------LLHNEEDMSTSEEDPSTHQDVFGANSVENVK-NLLEDS 166
              +I KLL  + SD        ++ +++D+S S++  S+   +    S  +     LE  
Sbjct: 706  KSAINKLLGADGSDGSEIDDDHIILHDDDVSDSDDTTSSLSTLESTESFASASMGELESP 765

Query: 165  TELDD 151
            ++L D
Sbjct: 766  SDLTD 770


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