BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004055
         (2364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [S...   194   1e-46
gb|AFW82289.1| putative RING zinc finger domain superfamily prot...   187   8e-45
ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group] g...   187   8e-45
gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]     187   1e-44
ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea ...   187   1e-44

>ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [Sorghum bicolor]
            gi|241945227|gb|EES18372.1| hypothetical protein
            SORBIDRAFT_09g023070 [Sorghum bicolor]
          Length = 551

 Score =  194 bits (492), Expect = 1e-46
 Identities = 114/262 (43%), Positives = 144/262 (54%), Gaps = 13/262 (4%)
 Frame = +3

Query: 948  TEGVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHR 1127
            T+G  V     DG E G   A F+CN+C ++A+EPVVTSCGHLFCWPCLYQWLH+H  H+
Sbjct: 209  TDGAVVGVSEDDGTEHGKSAAMFECNICFEMAEEPVVTSCGHLFCWPCLYQWLHVHSSHK 268

Query: 1128 ECPVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRI 1295
            ECPVCKGEVTE +ITPIYGRGNS    EK+   +G    S  KIPPRP G R E  RQ+ 
Sbjct: 269  ECPVCKGEVTEGNITPIYGRGNSGSDTEKKVAEDGNA--SGPKIPPRPHGNRLESFRQQF 326

Query: 1296 S--RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNR----RMLTRL 1448
               RP+ RR  +    L +WR + D  L+N    LE PP     E A +     RM TRL
Sbjct: 327  HHLRPISRRFGDTHGLLSTWRRIFDQHLVNSMSRLEAPPEPSVSETAQHASRLGRMTTRL 386

Query: 1449 MAAQRFQREDQYIENMVNFGGNGSSSSATEVANSERLLDRVPGIGTHPILARRGIDFWRR 1628
              A+R QRE +   ++V        SSA +          +P   + P  A  G+D  R 
Sbjct: 387  -RARRLQREAENPTSVV--------SSAPDSGQPGNNTSDLPRRSSSPFHA-EGMDLLRH 436

Query: 1629 FAFNSLLSTERLTAIAADLSTV 1694
             AF  L  +ER     ++L  +
Sbjct: 437  IAFAGLEDSERFATAVSELRRI 458


>gb|AFW82289.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 550

 Score =  187 bits (476), Expect = 8e-45
 Identities = 111/262 (42%), Positives = 141/262 (53%), Gaps = 10/262 (3%)
 Frame = +3

Query: 939  KDSTEGVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHC 1118
            K + EG  V     DG E G   A F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H 
Sbjct: 206  KVAAEGAVVGVSEDDGTEHGKSTAMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHS 265

Query: 1119 DHRECPVCKGEVTEADITPIYGRGNSEKESGREGKEVDSS-LKIPPRPRGRRSEGLRQRI 1295
             H+ECPVCKGEVTE +ITPIYGRGNS     +  ++ ++S  KIPPRP G R E  RQ+ 
Sbjct: 266  SHKECPVCKGEVTEGNITPIYGRGNSGSAMEKVAEDGNASGPKIPPRPHGNRLESFRQQF 325

Query: 1296 S--RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNR----RMLTRL 1448
               RP+ RR  E    L +WR + D  L N     E  P L   E A +     RM TRL
Sbjct: 326  HHLRPISRRLGEAHGFLSTWRRIFDQHLANSMSRFEGTPELSVSETAQHASRLGRMTTRL 385

Query: 1449 MAAQRFQREDQYIENMVNFGGNGSSSSATEVANSERLLDRVPGIGTHPILARRGIDFWRR 1628
              A+R QRE +    +V        SSA +          +P   + P     G+D  R+
Sbjct: 386  -RARRLQREAENPTPIV--------SSAPDSGQPRNNTPDLPRRSSSP-FPSEGMDLLRQ 435

Query: 1629 FAFNSLLSTERLTAIAADLSTV 1694
             AF  L  +ER     ++L  +
Sbjct: 436  IAFAGLEDSERFATAVSELRRI 457


>ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group]
            gi|113579360|dbj|BAF17723.1| Os05g0470700 [Oryza sativa
            Japonica Group] gi|215769483|dbj|BAH01712.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222631919|gb|EEE64051.1| hypothetical protein
            OsJ_18880 [Oryza sativa Japonica Group]
          Length = 562

 Score =  187 bits (476), Expect = 8e-45
 Identities = 112/264 (42%), Positives = 144/264 (54%), Gaps = 15/264 (5%)
 Frame = +3

Query: 951  EGVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHRE 1130
            +G  V    ++  E+G  +A F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+E
Sbjct: 215  DGAIVGASEEEPAERGKSVAMFECNICFEMASEPVVTSCGHLFCWPCLYQWLHVHSTHKE 274

Query: 1131 CPVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS 1298
            CPVCKGEVTE +ITPIYGRGNS    EK+   EG    S   IPPRP G R E  RQ+  
Sbjct: 275  CPVCKGEVTEGNITPIYGRGNSTSDAEKKVAEEGNV--SGPTIPPRPHGNRLESFRQKFH 332

Query: 1299 --RPLLRRPRED---LGSWRFVVDDELINQPDELEEPP------MLGTFEGASNRRMLTR 1445
              RP+ RR  E    L SWR ++D +++N     E PP      M+     AS    +T 
Sbjct: 333  HLRPISRRLGEAHGILSSWRRILDQQIMNSVSRFEGPPESTVQEMIDHAHHASRLGRITT 392

Query: 1446 LMAAQRFQREDQYIENMVNFGGNGSSSSATEVANSERLLDRVPGIGTHPILARRGIDFWR 1625
             M A+R QRE +             +SSA E          +P   + P  + R ID  +
Sbjct: 393  RMRARRLQREAE--------NSTFVASSAAESGLPANSTSDLPRRSSSPFSSER-IDLLQ 443

Query: 1626 RFAFNSLLSTERLTAIAADLSTVV 1697
             F    L STERL +  +DL  +V
Sbjct: 444  HFV--DLASTERLASAVSDLRRMV 465


>gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]
          Length = 550

 Score =  187 bits (475), Expect = 1e-44
 Identities = 107/256 (41%), Positives = 135/256 (52%), Gaps = 9/256 (3%)
 Frame = +3

Query: 954  GVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHREC 1133
            G  V     DG E G     F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+EC
Sbjct: 211  GAVVGVSEDDGTEHGKSAPMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHSSHKEC 270

Query: 1134 PVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS- 1298
            PVCKGEVTE +ITPIYGRGNS    EK+   +GK   S  KIPPRP G R E  RQ+   
Sbjct: 271  PVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKA--SGPKIPPRPHGNRLESFRQQFHH 328

Query: 1299 -RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNRRMLTRLMAAQRF 1466
             RP+ RR  E    L +WR ++D  L N     E PP     E A +   L R+    R 
Sbjct: 329  LRPISRRLGEAHGFLSTWRRILDRHLANSMSRFEGPPEPSVSETAQHASSLGRMTTRLRA 388

Query: 1467 QREDQYIENMVNFGGNGSSSSATEVANSERLLDRVPGIGTHPILARRGIDFWRRFAFNSL 1646
            +R  +  EN  +       SSA +          +P   ++P     G+D  R  AF  L
Sbjct: 389  RRWQREAENPTSI-----DSSAPDSGQPVNNTFDLPRRSSNP-FPSEGMDLLRHIAFTGL 442

Query: 1647 LSTERLTAIAADLSTV 1694
              +ER     ++L  +
Sbjct: 443  EDSERFATAVSELRRI 458


>ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea mays]
            gi|195611986|gb|ACG27823.1| zinc finger, C3HC4 type
            family protein [Zea mays]
          Length = 550

 Score =  187 bits (475), Expect = 1e-44
 Identities = 107/256 (41%), Positives = 135/256 (52%), Gaps = 9/256 (3%)
 Frame = +3

Query: 954  GVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHREC 1133
            G  V     DG E G     F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+EC
Sbjct: 211  GAVVGVSEDDGTEHGKSAPMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHSSHKEC 270

Query: 1134 PVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS- 1298
            PVCKGEVTE +ITPIYGRGNS    EK+   +GK   S  KIPPRP G R E  RQ+   
Sbjct: 271  PVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKA--SGPKIPPRPHGNRLESFRQQFHH 328

Query: 1299 -RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNRRMLTRLMAAQRF 1466
             RP+ RR  E    L +WR ++D  L N     E PP     E A +   L R+    R 
Sbjct: 329  LRPISRRLGEAHGFLSTWRRILDRHLANSMSRFEGPPEPSVSETAQHASSLGRMTTRLRA 388

Query: 1467 QREDQYIENMVNFGGNGSSSSATEVANSERLLDRVPGIGTHPILARRGIDFWRRFAFNSL 1646
            +R  +  EN  +       SSA +          +P   ++P     G+D  R  AF  L
Sbjct: 389  RRWQREAENPTSI-----DSSAPDSGQPVNNTFDLPRRSSNP-FPSEGMDLLRHIAFTGL 442

Query: 1647 LSTERLTAIAADLSTV 1694
              +ER     ++L  +
Sbjct: 443  EDSERFATAVSELRRI 458