BLASTX nr result

ID: Coptis21_contig00004044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004044
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324443.1| predicted protein [Populus trichocarpa] gi|2...   208   5e-52
ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-l...   207   1e-51
ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [...   201   6e-50
ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-l...   194   9e-48

>ref|XP_002324443.1| predicted protein [Populus trichocarpa] gi|222865877|gb|EEF03008.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score =  208 bits (530), Expect = 5e-52
 Identities = 117/190 (61%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
 Frame = -2

Query: 556 MASLSTDLQEVQINDNFAKVQEALYVAERKAREAVAMKSKLQKEILMKEKDRREQELRAL 377
           +A+    LQ+VQINDNFAK+ EALYVAE+KAREAVAM+SK+QKE++MKEK+R+EQELRAL
Sbjct: 284 LAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRAL 343

Query: 376 AQKARSEGSGRAPPPSFIITAESNMMD-----GDEMKLDDQTTIESKRENETREERLVHX 212
           AQKARSE +G APPPS  + +E   MD     GD   + D+     K   E REERL   
Sbjct: 344 AQKARSERTGAAPPPSAPVPSERGAMDDVDMRGDYEHVKDRERDAPKETREEREERLRRE 403

Query: 211 XXXXXXXXXXXXXXXXXXKDVAIGKKSKITRDRDRDISEKVALGMANTGAGCGGEVIYDQ 32
                             KD A+GKKSKITRDRDRDISEKVALGMA+TGAG GGEV YDQ
Sbjct: 404 KIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGAGKGGEVAYDQ 463

Query: 31  RLFNQEKGMD 2
           RLFNQEKGMD
Sbjct: 464 RLFNQEKGMD 473


>ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-like isoform 1 [Vitis
           vinifera] gi|359484551|ref|XP_003633120.1| PREDICTED:
           SNW domain-containing protein 1-like isoform 2 [Vitis
           vinifera]
          Length = 602

 Score =  207 bits (527), Expect = 1e-51
 Identities = 115/190 (60%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
 Frame = -2

Query: 556 MASLSTDLQEVQINDNFAKVQEALYVAERKAREAVAMKSKLQKEILMKEKDRREQELRAL 377
           +A+    LQEVQINDNFAK+ EALYVAE+KAREAVAM+SK+QKE+LMKEK+R+EQELRAL
Sbjct: 275 LAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMLMKEKERKEQELRAL 334

Query: 376 AQKARSEGSGRAPPPSFIITAESNMMDGDEMKLDDQTTIESKRE-----NETREERLVHX 212
           AQKARSE +G  PP +  + +E +MMD  +M+ D     E +R+      E REERL   
Sbjct: 335 AQKARSERTGVPPPAAAPMPSEKSMMDSGDMRGDYDRVREKERDFPKETREEREERLQRE 394

Query: 211 XXXXXXXXXXXXXXXXXXKDVAIGKKSKITRDRDRDISEKVALGMANTGAGCGGEVIYDQ 32
                             KD A+GKKSKITRDRDRDISEK++LGMA+TGAG GGEV+YDQ
Sbjct: 395 KIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKISLGMASTGAGRGGEVMYDQ 454

Query: 31  RLFNQEKGMD 2
           RLFNQEKGMD
Sbjct: 455 RLFNQEKGMD 464


>ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]
           gi|449523876|ref|XP_004168949.1| PREDICTED:
           puff-specific protein Bx42-like [Cucumis sativus]
          Length = 603

 Score =  201 bits (512), Expect = 6e-50
 Identities = 113/190 (59%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
 Frame = -2

Query: 556 MASLSTDLQEVQINDNFAKVQEALYVAERKAREAVAMKSKLQKEILMKEKDRREQELRAL 377
           +A+    LQEVQINDNFAK+ EALYVAE+KAREAVAM+SK+QKE+LMK+K+++E ELRAL
Sbjct: 276 LAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMLMKQKEKKELELRAL 335

Query: 376 AQKARSEGSGRAPPPSFIITAESNMMDGDEMKLDDQTTIES-----KRENETREERLVHX 212
           AQKARSE +G APP S +  ++ N +D  EMK + +   E      K   E REERL   
Sbjct: 336 AQKARSERTGAAPPSSVLYPSDRNTVDTSEMKGEFERVREKEKDLPKESREEREERLQRE 395

Query: 211 XXXXXXXXXXXXXXXXXXKDVAIGKKSKITRDRDRDISEKVALGMANTGAGCGGEVIYDQ 32
                             KD A+GKKSKITRDRDRDISEKVALGMA+TGAG  GEV+YDQ
Sbjct: 396 KIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGAGRQGEVMYDQ 455

Query: 31  RLFNQEKGMD 2
           RLFNQ+KGMD
Sbjct: 456 RLFNQDKGMD 465


>ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|222832076|gb|EEE70553.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  201 bits (510), Expect = 1e-49
 Identities = 115/187 (61%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
 Frame = -2

Query: 556 MASLSTDLQEVQINDNFAKVQEALYVAERKAREAVAMKSKLQKEILMKEKDRREQELRAL 377
           +A+    LQ+VQINDNFAK+ EALYVAE+KAREAVAM+SK+QKE++MKEK+R+EQELRAL
Sbjct: 282 LAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRAL 341

Query: 376 AQKARSEGSGRAPPPSFIITAESNMMDGDEMKLDDQTTIESKRE--NETREERLVHXXXX 203
           AQKARSE +G APPPS  +  E   MD  +M+ D +   E +R+   ET E R       
Sbjct: 342 AQKARSERTGAAPPPSAPVPLERGAMDDVDMRGDYEHVKERERDAPKETGEGR------- 394

Query: 202 XXXXXXXXXXXXXXXKDVAIGKKSKITRDRDRDISEKVALGMANTGAGCGGEVIYDQRLF 23
                          KD A+GKKSKITRDRDRDISEKVALGMA+TGAG GGEV YDQRLF
Sbjct: 395 ---EAATERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGAGKGGEVAYDQRLF 451

Query: 22  NQEKGMD 2
           NQEKGMD
Sbjct: 452 NQEKGMD 458


>ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus]
           gi|449487951|ref|XP_004157882.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 1 [Cucumis
           sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 2 [Cucumis
           sativus]
          Length = 605

 Score =  194 bits (493), Expect = 9e-48
 Identities = 111/192 (57%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
 Frame = -2

Query: 556 MASLSTDLQEVQINDNFAKVQEALYVAERKAREAVAMKSKLQKEILMKEKDRREQELRAL 377
           +A+    LQEVQINDNFAK+ EALYVAE+KAREAVAM+SK+QKE+LMK+K+++E ELRAL
Sbjct: 276 LAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMLMKQKEKKELELRAL 335

Query: 376 AQKARSEGSGRAPPPSFIITAESNMMDGD--EMKLDDQTTIES-----KRENETREERLV 218
           AQKARSE +G APP +   ++E + +D D  E+ ++ +   E      K   E REERL 
Sbjct: 336 AQKARSERTGAAPPSAVHYSSERSTVDRDTSEISVEFERVREKEKDLPKESREEREERLQ 395

Query: 217 HXXXXXXXXXXXXXXXXXXXKDVAIGKKSKITRDRDRDISEKVALGMANTGAGCGGEVIY 38
                               KD A+GKKSKITRDRDRDISEKVALGMA+TGAG  GEV+Y
Sbjct: 396 REKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGAGREGEVMY 455

Query: 37  DQRLFNQEKGMD 2
           DQRLFNQ+KGMD
Sbjct: 456 DQRLFNQDKGMD 467


Top