BLASTX nr result

ID: Coptis21_contig00004031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004031
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002978980.1| hypothetical protein SELMODRAFT_444100 [Sela...    97   1e-18
ref|XP_002994584.1| hypothetical protein SELMODRAFT_432497 [Sela...    97   1e-18
ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ...    95   7e-18
ref|XP_004154797.1| PREDICTED: LOW QUALITY PROTEIN: general tran...    86   4e-15

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/91 (61%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   KAARAKRSLQERKALKEEKRAAVLAAGQEWYSDESDEESPRPTIIEPPLPNLLKDDEHYQ 182
           KA+RAK+ LQ++   KEE++AA +AAG +WYSDESD+ESP   + EPPLPNLLKD+EH+ 
Sbjct: 582 KASRAKKLLQKKATRKEERKAAAMAAGVDWYSDESDDESPEQKLREPPLPNLLKDEEHHH 641

Query: 183 LIIDLCKALASLGRYLEALKVIKDTRKVASN 275
           LI+DLCKALASL +Y EAL +I  T ++A N
Sbjct: 642 LILDLCKALASLRKYWEALDIINLTLRLAYN 672


>ref|XP_002978980.1| hypothetical protein SELMODRAFT_444100 [Selaginella moellendorffii]
           gi|300153298|gb|EFJ19937.1| hypothetical protein
           SELMODRAFT_444100 [Selaginella moellendorffii]
          Length = 1047

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   KAARAKRSLQERKALKEEKRAAVLAAGQEWYSDE-SDEESPRPTIIEPPLPNLLKDDEHY 179
           KA+RAK+ L +R A KEEK+AA LAAG EW S+E SD       + + PLPNLLKDDEHY
Sbjct: 708 KASRAKKVLAKRAAEKEEKKAAALAAGMEWESEEESDGAEAEMELKQSPLPNLLKDDEHY 767

Query: 180 QLIIDLCKALASLGRYLEALKVIKDTRKVASN 275
           Q ++  CKALAS+ RY EAL+VI  + +V ++
Sbjct: 768 QTLLQACKALASIQRYWEALEVIHHSLRVGNS 799


>ref|XP_002994584.1| hypothetical protein SELMODRAFT_432497 [Selaginella moellendorffii]
           gi|300137377|gb|EFJ04351.1| hypothetical protein
           SELMODRAFT_432497 [Selaginella moellendorffii]
          Length = 1006

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   KAARAKRSLQERKALKEEKRAAVLAAGQEWYSDE-SDEESPRPTIIEPPLPNLLKDDEHY 179
           KA+RAK+ L +R A KEEK+AA LAAG EW S+E SD       + + PLPNLLKDDEHY
Sbjct: 667 KASRAKKVLAKRAAEKEEKKAAALAAGMEWESEEESDGAEAEMELKQSPLPNLLKDDEHY 726

Query: 180 QLIIDLCKALASLGRYLEALKVIKDTRKVASN 275
           Q ++  CKALAS+ RY EAL+VI  + +V ++
Sbjct: 727 QTLLQACKALASIQRYWEALEVIHHSLRVGNS 758


>ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
           sativus]
          Length = 927

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/94 (55%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   KAARAKRSLQERKALKEEKRAAVLAAGQEWYSDESDEESPRPTIIEPPLPNLLKDDEHYQ 182
           KA+RAKR LQ+R+ +KEEK+A  LAAG     D+ D+E       E PLPNLLK++E++ 
Sbjct: 595 KASRAKRLLQKRERIKEEKKAKALAAGVNLSYDDLDDEPALRMHRESPLPNLLKEEEYHI 654

Query: 183 LIIDLCKALASLGRYLEALKVIKDTRKVASNTPS 284
           LI+DLCKALASLGR  EAL++I  T K+A N+ S
Sbjct: 655 LIVDLCKALASLGRCSEALEIISLTLKLAFNSLS 688


>ref|XP_004154797.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
           polypeptide 3-like [Cucumis sativus]
          Length = 627

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/94 (52%), Positives = 64/94 (68%)
 Frame = +3

Query: 3   KAARAKRSLQERKALKEEKRAAVLAAGQEWYSDESDEESPRPTIIEPPLPNLLKDDEHYQ 182
           KA+RAKR LQ+R+ +KEEK+A  LAAG   +              E PLPNLLK++E++ 
Sbjct: 304 KASRAKRLLQKRERIKEEKKAKALAAGLRMHR-------------ESPLPNLLKEEEYHI 350

Query: 183 LIIDLCKALASLGRYLEALKVIKDTRKVASNTPS 284
           LI+DLCKALASLGR  EAL++I  T K+A N+ S
Sbjct: 351 LIVDLCKALASLGRCSEALEIISLTLKLAFNSLS 384


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