BLASTX nr result

ID: Coptis21_contig00004016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004016
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528552.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_003599875.1| hypothetical protein MTR_3g048300 [Medicago ...    58   9e-07
ref|XP_002283729.1| PREDICTED: uncharacterized protein LOC100257...    56   3e-06
ref|NP_181818.1| basic secretory protein (BSP) family protein [A...    56   3e-06

>ref|XP_002528552.1| conserved hypothetical protein [Ricinus communis]
           gi|223532054|gb|EEF33864.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/78 (35%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
 Frame = +1

Query: 283 MEDNHLLHPFISNTITSTTN---KQNDDTDII-----ANIVPRFMFIFFVAIVSMWANYQ 438
           MED+ L  P ++ T +S+++   + ++D DI      ++I+ R + I  + ++S+WANY+
Sbjct: 1   MEDHQLFQPLLATTTSSSSSSTLEDHEDNDIKLFLSGSSIILRLVTIISLGVISLWANYE 60

Query: 439 ASKGFEIVIINDVKDATS 492
           ASKGF+I ++ND+KD ++
Sbjct: 61  ASKGFDITVVNDIKDTSA 78


>ref|XP_003599875.1| hypothetical protein MTR_3g048300 [Medicago truncatula]
           gi|355488923|gb|AES70126.1| hypothetical protein
           MTR_3g048300 [Medicago truncatula]
          Length = 294

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
 Frame = +1

Query: 277 LEMEDNHLL-HPFIS--NTITSTTNKQNDDTDIIA------NIVPRFMFIFFVAIVSMWA 429
           +E ED H L  P +   N  +   N+QND  +         NI+ R + I FVAI+S+WA
Sbjct: 1   MENEDKHFLFQPLLPHFNPSSYEINQQNDYNNSKFFIPNNNNIIHRILLILFVAIISIWA 60

Query: 430 NYQASKGFEIVIINDVKDA 486
           NY+ASK F+I I+ND KD+
Sbjct: 61  NYEASKTFDIHIVNDTKDS 79


>ref|XP_002283729.1| PREDICTED: uncharacterized protein LOC100257403 [Vitis vinifera]
          Length = 294

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = +1

Query: 283 MEDNHLLHPFI---SNTITSTTNKQNDDTDIIAN---IVPRFMFIFFVAIVSMWANYQAS 444
           MED +LL P +   + T ++ T  ++D  ++I++   I+ R + +FF+ IV++WAN +AS
Sbjct: 1   MEDYNLLQPLLQPPATTSSANTAAKDDAINLISSNSGILFRVLSVFFIGIVTIWANCEAS 60

Query: 445 KGFEIVIINDVKDATS 492
           KGF I IIND  D  +
Sbjct: 61  KGFSITIINDAGDTAA 76


>ref|NP_181818.1| basic secretory protein (BSP) family protein [Arabidopsis thaliana]
           gi|4512665|gb|AAD21719.1| unknown protein [Arabidopsis
           thaliana] gi|20197864|gb|AAM15288.1| unknown protein
           [Arabidopsis thaliana] gi|46931222|gb|AAT06415.1|
           At2g42900 [Arabidopsis thaliana]
           gi|48310431|gb|AAT41819.1| At2g42900 [Arabidopsis
           thaliana] gi|330255091|gb|AEC10185.1| basic secretory
           protein (BSP) family protein [Arabidopsis thaliana]
          Length = 276

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%)
 Frame = +1

Query: 277 LEMEDNHLLHPFISNTITSTTNKQNDDTDIIANIVPRFMFIFFVAIVSMWANYQASKGFE 456
           + M D  LL PF++   T     ++D     + I+ R   I  V  +S+WAN++ASKGF 
Sbjct: 2   VSMTDQTLLQPFLAKPTTKGLATESD-----SGIILRLFSILLVGAISLWANHEASKGFS 56

Query: 457 IVIINDVKDATS 492
           I IIND KD+ S
Sbjct: 57  ISIINDAKDSPS 68


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