BLASTX nr result

ID: Coptis21_contig00004013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004013
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20063.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002273325.1| PREDICTED: uncharacterized protein LOC100257...   114   8e-24
ref|XP_002298179.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
emb|CBI23750.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_002265509.1| PREDICTED: uncharacterized protein LOC100260...   108   5e-22

>emb|CBI20063.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/73 (72%), Positives = 58/73 (79%)
 Frame = -3

Query: 316 AVLQTKPCVGVLCPPLEPQVAVKSTKRAFIVSVVLHCYYKHISQMPSWSKLDLCLFAAAW 137
           +V   +  VG++ PPLEPQ+ VKSTKRA IV V L CYYK ISQMPSWSKLDLC FAAAW
Sbjct: 203 SVAPARQSVGLVSPPLEPQIEVKSTKRACIVGVALDCYYKQISQMPSWSKLDLCQFAAAW 262

Query: 136 AGQNCICKGEFDV 98
           AGQNC CK EFDV
Sbjct: 263 AGQNCPCKAEFDV 275


>ref|XP_002273325.1| PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera]
          Length = 401

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/73 (72%), Positives = 58/73 (79%)
 Frame = -3

Query: 316 AVLQTKPCVGVLCPPLEPQVAVKSTKRAFIVSVVLHCYYKHISQMPSWSKLDLCLFAAAW 137
           +V   +  VG++ PPLEPQ+ VKSTKRA IV V L CYYK ISQMPSWSKLDLC FAAAW
Sbjct: 186 SVAPARQSVGLVSPPLEPQIEVKSTKRACIVGVALDCYYKQISQMPSWSKLDLCQFAAAW 245

Query: 136 AGQNCICKGEFDV 98
           AGQNC CK EFDV
Sbjct: 246 AGQNCPCKAEFDV 258


>ref|XP_002298179.1| predicted protein [Populus trichocarpa] gi|222845437|gb|EEE82984.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  108 bits (271), Expect = 3e-22
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -3

Query: 298 PCVGVLCPPLEPQVAVKSTKRAFIVSVVLHCYYKHISQMPSWSKLDLCLFAAAWAGQNCI 119
           P  GVL PPLEPQ+A+KSTKR  IV V L CY+KHISQMPSWSK++LC FAAAWAGQ+C 
Sbjct: 202 PSTGVLSPPLEPQIAIKSTKRPVIVGVALDCYFKHISQMPSWSKVELCRFAAAWAGQDCA 261

Query: 118 CKGEFD 101
           C+ +FD
Sbjct: 262 CQDKFD 267


>emb|CBI23750.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/64 (78%), Positives = 52/64 (81%)
 Frame = -3

Query: 292 VGVLCPPLEPQVAVKSTKRAFIVSVVLHCYYKHISQMPSWSKLDLCLFAAAWAGQNCICK 113
           +G+  PPLEPQ  VKSTKRA IV V L CYYK ISQMPSWSKLDLC FAAAWAGQNC CK
Sbjct: 783 IGLASPPLEPQSEVKSTKRACIVGVALDCYYKQISQMPSWSKLDLCRFAAAWAGQNCPCK 842

Query: 112 GEFD 101
            EFD
Sbjct: 843 AEFD 846


>ref|XP_002265509.1| PREDICTED: uncharacterized protein LOC100260050 [Vitis vinifera]
          Length = 400

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/64 (78%), Positives = 52/64 (81%)
 Frame = -3

Query: 292 VGVLCPPLEPQVAVKSTKRAFIVSVVLHCYYKHISQMPSWSKLDLCLFAAAWAGQNCICK 113
           +G+  PPLEPQ  VKSTKRA IV V L CYYK ISQMPSWSKLDLC FAAAWAGQNC CK
Sbjct: 194 IGLASPPLEPQSEVKSTKRACIVGVALDCYYKQISQMPSWSKLDLCRFAAAWAGQNCPCK 253

Query: 112 GEFD 101
            EFD
Sbjct: 254 AEFD 257


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