BLASTX nr result

ID: Coptis21_contig00003977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003977
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39286.1| Putative transcription factor, identical [Solanum...    64   4e-08
ref|XP_003613691.1| TCP family transcription factor-like protein...    62   1e-07
emb|CAB61988.1| putative protein [Arabidopsis thaliana]                62   1e-07
ref|NP_190346.2| transcription factor TCP14 [Arabidopsis thalian...    62   1e-07
ref|XP_003517785.1| PREDICTED: transcription factor TCP15-like [...    62   2e-07

>gb|AAT39286.1| Putative transcription factor, identical [Solanum demissum]
          Length = 202

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
 Frame = +1

Query: 157 TGTSNQSSC--HKEETKDVEKKPRFSPRKRRLRNEGFKDRYGRLSLFQIPPACASIINQL 330
           T +S+ + C  H +++K+ +KK + + +    ++   K   GR    ++P  CA+ + QL
Sbjct: 2   TTSSSDAPCVDHNQKSKNQDKKQQEAKKPTTTKDRHTKVD-GRGRRIRMPATCAARVFQL 60

Query: 331 NRELGHTSEVETLEWLLKQADPAVRSVLGKTGEEDG-------YKEKNNKEKTDVVAFYN 489
            RELGH S+ ET+EWLL+QA+PAV +  G    + G       Y   NN   T       
Sbjct: 61  TRELGHKSDGETIEWLLQQAEPAVIAATGTASHQIGHIPATTLYMMTNNNNNT------- 113

Query: 490 SHHF-HSCSKFA 522
           SHH  ++CS +A
Sbjct: 114 SHHDPNNCSMWA 125


>ref|XP_003613691.1| TCP family transcription factor-like protein [Medicago truncatula]
           gi|355515026|gb|AES96649.1| TCP family transcription
           factor-like protein [Medicago truncatula]
          Length = 416

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 48/85 (56%)
 Frame = +1

Query: 163 TSNQSSCHKEETKDVEKKPRFSPRKRRLRNEGFKDRYGRLSLFQIPPACASIINQLNREL 342
           T+    C    + D +KKP   P KR    +      GR    ++P ACA+ + QL REL
Sbjct: 42  TTGNDGCTAIISSDQQKKP---PPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTREL 98

Query: 343 GHTSEVETLEWLLKQADPAVRSVLG 417
           GH S+ ET+EWLL+QA+PAV +  G
Sbjct: 99  GHKSDGETIEWLLQQAEPAVIAATG 123


>emb|CAB61988.1| putative protein [Arabidopsis thaliana]
          Length = 477

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
 Frame = +1

Query: 97  HHPNSQFQPSCQIEDRQAIATGTSNQSSCHKEETKDVEKKPRFSPRKRRLRNEGFKDRY- 273
           H   SQ QP  Q +  Q   T         KE  +  E+    + +K  L+    KDR+ 
Sbjct: 59  HQQLSQSQPQSQSQKSQPQTT--------QKELLQTQEESAVVAAKKPPLKRASTKDRHT 110

Query: 274 ---GRLSLFQIPPACASIINQLNRELGHTSEVETLEWLLKQADPAVRSVLG 417
              GR    ++P  CA+ + QL RELGH S+ ET+EWLL+QA+P+V +  G
Sbjct: 111 KVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG 161


>ref|NP_190346.2| transcription factor TCP14 [Arabidopsis thaliana]
           gi|75249447|sp|Q93Z00.1|TCP14_ARATH RecName:
           Full=Transcription factor TCP14
           gi|16604511|gb|AAL24261.1| AT3g47620/F1P2_170
           [Arabidopsis thaliana] gi|21655289|gb|AAM65356.1|
           AT3g47620/F1P2_170 [Arabidopsis thaliana]
           gi|332644787|gb|AEE78308.1| transcription factor TCP14
           [Arabidopsis thaliana]
          Length = 489

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
 Frame = +1

Query: 97  HHPNSQFQPSCQIEDRQAIATGTSNQSSCHKEETKDVEKKPRFSPRKRRLRNEGFKDRY- 273
           H   SQ QP  Q +  Q   T         KE  +  E+    + +K  L+    KDR+ 
Sbjct: 71  HQQLSQSQPQSQSQKSQPQTT--------QKELLQTQEESAVVAAKKPPLKRASTKDRHT 122

Query: 274 ---GRLSLFQIPPACASIINQLNRELGHTSEVETLEWLLKQADPAVRSVLG 417
              GR    ++P  CA+ + QL RELGH S+ ET+EWLL+QA+P+V +  G
Sbjct: 123 KVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG 173


>ref|XP_003517785.1| PREDICTED: transcription factor TCP15-like [Glycine max]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 39/90 (43%), Positives = 50/90 (55%)
 Frame = +1

Query: 148 AIATGTSNQSSCHKEETKDVEKKPRFSPRKRRLRNEGFKDRYGRLSLFQIPPACASIINQ 327
           A AT TS  +  H  E     KKP   P KR    +      GR    ++P ACA+ + Q
Sbjct: 44  AAATITSGNNDLHVAEQS---KKP---PPKRSSTKDRHTKVDGRGRRIRMPAACAARVFQ 97

Query: 328 LNRELGHTSEVETLEWLLKQADPAVRSVLG 417
           L RELGH S+ ET+EWLL+QA+PAV +  G
Sbjct: 98  LTRELGHKSDGETIEWLLQQAEPAVIAATG 127


Top