BLASTX nr result

ID: Coptis21_contig00003958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003958
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283026.1| PREDICTED: reticulon-like protein B8 isoform...   378   e-102
ref|XP_002302126.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002521590.1| conserved hypothetical protein [Ricinus comm...   364   2e-98
ref|XP_003519525.1| PREDICTED: uncharacterized protein LOC100500...   362   7e-98
ref|NP_001241930.1| uncharacterized protein LOC100787981 [Glycin...   362   1e-97

>ref|XP_002283026.1| PREDICTED: reticulon-like protein B8 isoform 3 [Vitis vinifera]
           gi|225446771|ref|XP_002283019.1| PREDICTED:
           reticulon-like protein B8 isoform 2 [Vitis vinifera]
           gi|225446773|ref|XP_002283015.1| PREDICTED:
           reticulon-like protein B8 isoform 1 [Vitis vinifera]
           gi|302143506|emb|CBI22067.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  378 bits (971), Expect = e-102
 Identities = 176/248 (70%), Positives = 216/248 (87%)
 Frame = +1

Query: 115 MPEKITAENLLNNIMETFTENAPKPKNMSFFEEDKSASVSDQINSLFGRQKPVHKVLGGG 294
           MPE ITAE LLNNIMET ++NA K K++SFFEE+KS SV+ Q   LFGR+KPV+ +LG G
Sbjct: 1   MPEGITAEKLLNNIMETISDNAQKKKSVSFFEEEKSNSVTSQFKRLFGREKPVYNLLGAG 60

Query: 295 KSADVLLWRNKKISASVLTGATAIWVIFEWLNYHLLTMVFFALLIGMLAQFAWSNASGLV 474
           KSAD++LWRNKKISAS +TGAT IWV+FEWLNYH LT++ FA+++GM+AQF WSNASG+ 
Sbjct: 61  KSADLMLWRNKKISASFITGATLIWVLFEWLNYHFLTLLCFAVVLGMIAQFVWSNASGVF 120

Query: 475 NRSPSKVPRVRLPEELFANIGVSIGVEVNRFLGYLQNVACGGNLKQFLMVVLSLWIAAVI 654
           +RS S+VPR+ LP+ELF NIGV++GV++N+ LG+LQ+VACGGNLKQFL+VV+SLW AAVI
Sbjct: 121 SRSSSEVPRIVLPDELFQNIGVAVGVQINQALGFLQDVACGGNLKQFLLVVVSLWAAAVI 180

Query: 655 GSWCNFLTVLYIGFIGAHTLPVLYERYEDQIDSFVYKILDQLQHQYGKIDSKVLSRIPKG 834
           GSWCNFLTVLY+GFI AHTLPVLYERYEDQ+D FVY++L QLQH Y K+DS  LS+IPKG
Sbjct: 181 GSWCNFLTVLYVGFIAAHTLPVLYERYEDQVDGFVYQVLGQLQHNYRKLDSGFLSKIPKG 240

Query: 835 SFKGRKFE 858
           S KG+K E
Sbjct: 241 SLKGKKHE 248


>ref|XP_002302126.1| predicted protein [Populus trichocarpa] gi|222843852|gb|EEE81399.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  370 bits (949), Expect = e-100
 Identities = 173/248 (69%), Positives = 213/248 (85%)
 Frame = +1

Query: 115 MPEKITAENLLNNIMETFTENAPKPKNMSFFEEDKSASVSDQINSLFGRQKPVHKVLGGG 294
           MPEKITAE+L +N++ET  +N PK K++SFFEE +  SV+ +IN LFGRQKPVH +LGGG
Sbjct: 1   MPEKITAESLFSNLVETIADNVPKQKSVSFFEEGEE-SVTSRINRLFGRQKPVHHILGGG 59

Query: 295 KSADVLLWRNKKISASVLTGATAIWVIFEWLNYHLLTMVFFALLIGMLAQFAWSNASGLV 474
           KSADVLLWRNKKISA VLTGATAIWV+FEWLNYHLL++V FAL +GMLAQF W NASGL+
Sbjct: 60  KSADVLLWRNKKISAGVLTGATAIWVLFEWLNYHLLSLVCFALALGMLAQFVWINASGLM 119

Query: 475 NRSPSKVPRVRLPEELFANIGVSIGVEVNRFLGYLQNVACGGNLKQFLMVVLSLWIAAVI 654
           NRSPS+VPR+ LP+++F +IG SIG EVNR L +LQ+++CGGNLKQFL  ++SLW+AA+I
Sbjct: 120 NRSPSQVPRLVLPDDIFVSIGRSIGAEVNRALLFLQDLSCGGNLKQFLAAIVSLWVAAII 179

Query: 655 GSWCNFLTVLYIGFIGAHTLPVLYERYEDQIDSFVYKILDQLQHQYGKIDSKVLSRIPKG 834
           GSWCNFLTV+YIGF+ AHTLPVLYERYEDQ+D FV+K  DQL++ Y K+D+ VL +IPKG
Sbjct: 180 GSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDDFVFKAFDQLRNNYQKLDAGVLGKIPKG 239

Query: 835 SFKGRKFE 858
            F G+K E
Sbjct: 240 KFNGKKHE 247


>ref|XP_002521590.1| conserved hypothetical protein [Ricinus communis]
           gi|223539268|gb|EEF40861.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 247

 Score =  364 bits (934), Expect = 2e-98
 Identities = 173/248 (69%), Positives = 211/248 (85%)
 Frame = +1

Query: 115 MPEKITAENLLNNIMETFTENAPKPKNMSFFEEDKSASVSDQINSLFGRQKPVHKVLGGG 294
           M EK TAE  LNN++E   ++ PK K++SFFEE+ S SV+ + + LFGRQKPVH +LGGG
Sbjct: 1   MAEKKTAEKFLNNLVEVLADSVPKQKSVSFFEEETS-SVTARFHRLFGRQKPVHHLLGGG 59

Query: 295 KSADVLLWRNKKISASVLTGATAIWVIFEWLNYHLLTMVFFALLIGMLAQFAWSNASGLV 474
           KSADVLLWRNKKISASVLTGATAIW++FEWLNYH LT+V  AL++GMLAQF W+NASGLV
Sbjct: 60  KSADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQFVWTNASGLV 119

Query: 475 NRSPSKVPRVRLPEELFANIGVSIGVEVNRFLGYLQNVACGGNLKQFLMVVLSLWIAAVI 654
           NRSP KVPR+ LP+E+F +IG S+GVE+N  L +LQ+V+CGGNLKQFL+VV SLW +AVI
Sbjct: 120 NRSPPKVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLKQFLVVVASLWASAVI 179

Query: 655 GSWCNFLTVLYIGFIGAHTLPVLYERYEDQIDSFVYKILDQLQHQYGKIDSKVLSRIPKG 834
           GSWCNFLTVLY GF+ AHTLPVLYERYEDQ+D FVYK+L+QLQ  Y K+D+ +LS+IPKG
Sbjct: 180 GSWCNFLTVLYTGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDTGLLSKIPKG 239

Query: 835 SFKGRKFE 858
           + KG+K E
Sbjct: 240 NLKGKKHE 247


>ref|XP_003519525.1| PREDICTED: uncharacterized protein LOC100500122 [Glycine max]
          Length = 245

 Score =  362 bits (930), Expect = 7e-98
 Identities = 171/248 (68%), Positives = 209/248 (84%)
 Frame = +1

Query: 115 MPEKITAENLLNNIMETFTENAPKPKNMSFFEEDKSASVSDQINSLFGRQKPVHKVLGGG 294
           M EKITAENLLN ++ET TE   K K+ SFFEEDKS+SVS Q N LFGRQKPVH +LGGG
Sbjct: 1   MSEKITAENLLNTLVETLTE---KQKSGSFFEEDKSSSVSYQFNRLFGRQKPVHHILGGG 57

Query: 295 KSADVLLWRNKKISASVLTGATAIWVIFEWLNYHLLTMVFFALLIGMLAQFAWSNASGLV 474
           KSADVLLWRNKKISASVL+ ATAIWV+FEWLNY+ +T++FF + +GML QF W+N SGL 
Sbjct: 58  KSADVLLWRNKKISASVLSAATAIWVLFEWLNYNFITILFFVVALGMLGQFLWTNVSGLF 117

Query: 475 NRSPSKVPRVRLPEELFANIGVSIGVEVNRFLGYLQNVACGGNLKQFLMVVLSLWIAAVI 654
           +R PSKVPR  LP+++F NI   +G EVNR L +LQ+V+CGG+LKQFL+VV+SLW  AVI
Sbjct: 118 SRKPSKVPRFVLPDDIFVNIATVVGAEVNRGLRFLQDVSCGGSLKQFLIVVVSLWAGAVI 177

Query: 655 GSWCNFLTVLYIGFIGAHTLPVLYERYEDQIDSFVYKILDQLQHQYGKIDSKVLSRIPKG 834
           GSWCNFLTV+YIGF+ AHTLPVLYERYEDQ+D+FVYK+ DQ+Q+ Y K+D+ +LS+IPKG
Sbjct: 178 GSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVFDQMQNHYQKLDTGLLSKIPKG 237

Query: 835 SFKGRKFE 858
             KG+K+E
Sbjct: 238 KLKGKKYE 245


>ref|NP_001241930.1| uncharacterized protein LOC100787981 [Glycine max]
           gi|255638847|gb|ACU19727.1| unknown [Glycine max]
          Length = 245

 Score =  362 bits (928), Expect = 1e-97
 Identities = 171/248 (68%), Positives = 207/248 (83%)
 Frame = +1

Query: 115 MPEKITAENLLNNIMETFTENAPKPKNMSFFEEDKSASVSDQINSLFGRQKPVHKVLGGG 294
           M EKITAE LLN ++ET TE   K K+  FFEEDKS+SVS Q N LFGRQKPVH +LGGG
Sbjct: 1   MSEKITAEKLLNTLVETLTE---KQKSGLFFEEDKSSSVSSQFNRLFGRQKPVHHILGGG 57

Query: 295 KSADVLLWRNKKISASVLTGATAIWVIFEWLNYHLLTMVFFALLIGMLAQFAWSNASGLV 474
           KSADVLLWRNKKISASVL+ ATAIWV+FEWLNY+ LT++FF + +GML QF W+NASGL 
Sbjct: 58  KSADVLLWRNKKISASVLSAATAIWVLFEWLNYNFLTILFFVVALGMLGQFLWTNASGLF 117

Query: 475 NRSPSKVPRVRLPEELFANIGVSIGVEVNRFLGYLQNVACGGNLKQFLMVVLSLWIAAVI 654
           +R PSKVPR   P+ +F NI  ++G EVNR L +LQ+V+CGGNLKQFL+V++SLW  AVI
Sbjct: 118 SRKPSKVPRFVFPDGIFVNIATAVGAEVNRGLRFLQDVSCGGNLKQFLIVIVSLWAGAVI 177

Query: 655 GSWCNFLTVLYIGFIGAHTLPVLYERYEDQIDSFVYKILDQLQHQYGKIDSKVLSRIPKG 834
           GSWCNFLTV+YIGF+ AHTLPVLYERYEDQ+D+FVYK+ DQLQ+ Y K+D+ +LS+IPKG
Sbjct: 178 GSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVFDQLQNHYQKLDTGLLSKIPKG 237

Query: 835 SFKGRKFE 858
             KG+K+E
Sbjct: 238 KLKGKKYE 245


Top