BLASTX nr result

ID: Coptis21_contig00003927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003927
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE...   361   2e-97
ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE...   360   5e-97
ref|XP_002315438.1| predicted protein [Populus trichocarpa] gi|2...   360   5e-97
ref|XP_002311013.1| predicted protein [Populus trichocarpa] gi|2...   359   7e-97
gb|AFK35733.1| unknown [Lotus japonicus]                              358   2e-96

>ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
            chloroplastic-like [Glycine max]
          Length = 283

 Score =  361 bits (927), Expect = 2e-97
 Identities = 191/263 (72%), Positives = 219/263 (83%), Gaps = 2/263 (0%)
 Frame = -1

Query: 1130 SVSQISLIRHGFFFDHTTTPSISRENKYVLRASVDSPKTMGSFSSKAGQEADSIPMPIVM 951
            S+   SL    FF   T   S+SR+  + L+AS      +GS S ++G   DS+PMPIV+
Sbjct: 25   SIPLFSLPSDAFFRSPT---SLSRDKNF-LKASAYDLNAVGSASLQSGDNPDSVPMPIVL 80

Query: 950  IDQDSDSDATIVQLSFGDRLGALIDTMKALKDLGLDVAKGTVTTEASVLQTKFFITLLDT 771
            IDQ+SDS+ATIVQLSFGDRLGAL+DTMKALKDLGLDV+KGTV+TE  V QTKFFIT  DT
Sbjct: 81   IDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFITQSDT 140

Query: 770  GRKVEDPDMLERIRLTIINNLLKYHPECSERLAMGEAFGIKAPEKKV--NIATHIHVKAD 597
            GRKVEDPDMLERIRLTIINNLLKYHPE SE LAMGE FGIKAP+KK+  +I T I VK D
Sbjct: 141  GRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQVKED 200

Query: 596  GPKRSLLYIETADRPGLLLEIIKIMADINVNVESAEIDTEGLVAKDTFHVSYQGAALNNS 417
            GPKRSLLYIETADRPGLL+EIIK++AD+N++VESAEIDTEGLVAKDTFHVSY GAALN+S
Sbjct: 201  GPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVSYGGAALNSS 260

Query: 416  LSQVLINCLRYYLRRPETDEDSY 348
            ++QVL+NCLRYYLR PETD DSY
Sbjct: 261  MAQVLVNCLRYYLRTPETDIDSY 283


>ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
            chloroplastic-like [Glycine max]
          Length = 282

 Score =  360 bits (923), Expect = 5e-97
 Identities = 192/263 (73%), Positives = 219/263 (83%), Gaps = 2/263 (0%)
 Frame = -1

Query: 1130 SVSQISLIRHGFFFDHTTTPSISRENKYVLRASVDSPKTMGSFSSKAGQEADSIPMPIVM 951
            S+   SL    FF   T   S+SR+ K +L AS      +GS S ++G   DS+PMPIV+
Sbjct: 24   SIPLFSLPSDAFFRSPT---SLSRD-KNILYASAYDLNAVGSASLQSGDNPDSLPMPIVL 79

Query: 950  IDQDSDSDATIVQLSFGDRLGALIDTMKALKDLGLDVAKGTVTTEASVLQTKFFITLLDT 771
            IDQ+SDS+ATIVQLSFG+RLGAL+DTMKALKDLGLDV+KGTV+TE  V QTKFFIT  DT
Sbjct: 80   IDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFITQSDT 139

Query: 770  GRKVEDPDMLERIRLTIINNLLKYHPECSERLAMGEAFGIKAPEKKV--NIATHIHVKAD 597
            GRKVEDPDMLERIRLTIINNLLKYHPE SE LAMGE FGIKAP+KK+  +I T I VK D
Sbjct: 140  GRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQVKED 199

Query: 596  GPKRSLLYIETADRPGLLLEIIKIMADINVNVESAEIDTEGLVAKDTFHVSYQGAALNNS 417
            GPKRSLLYIETADRPGLL+EIIK++AD+N++VESAEIDTEGLVAKDTFHVSY GAALN+S
Sbjct: 200  GPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVSYGGAALNSS 259

Query: 416  LSQVLINCLRYYLRRPETDEDSY 348
            +SQVL+NCLRYYLR PETD DSY
Sbjct: 260  MSQVLVNCLRYYLRTPETDIDSY 282


>ref|XP_002315438.1| predicted protein [Populus trichocarpa] gi|222864478|gb|EEF01609.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  360 bits (923), Expect = 5e-97
 Identities = 183/215 (85%), Positives = 198/215 (92%), Gaps = 2/215 (0%)
 Frame = -1

Query: 986 QEADSIPMPIVMIDQDSDSDATIVQLSFGDRLGALIDTMKALKDLGLDVAKGTVTTEASV 807
           Q+AD +PMP+V+IDQDSDSDATIVQLSFGDRLGALIDTM ALK LGLDVAKGTV T+  V
Sbjct: 3   QDADLVPMPVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPV 62

Query: 806 LQTKFFITLLDTGRKVEDPDMLERIRLTIINNLLKYHPECSERLAMGEAFGIKAPEKK-- 633
            QTKFFIT LDTGRKVEDPDMLERIRLTIINNLLKYHPE SERLAMGEAFGIKAPEKK  
Sbjct: 63  KQTKFFITRLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLD 122

Query: 632 VNIATHIHVKADGPKRSLLYIETADRPGLLLEIIKIMADINVNVESAEIDTEGLVAKDTF 453
           V+I TH+HVK DGPKRSLL IETADRPGLL+EIIKI+AD+N++VESAEIDTEGLVAKD F
Sbjct: 123 VDITTHVHVKEDGPKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKF 182

Query: 452 HVSYQGAALNNSLSQVLINCLRYYLRRPETDEDSY 348
           HVSY+GAAL +SLSQVL+NCLRYYLRRPETD DSY
Sbjct: 183 HVSYRGAALTSSLSQVLVNCLRYYLRRPETDIDSY 217


>ref|XP_002311013.1| predicted protein [Populus trichocarpa] gi|222850833|gb|EEE88380.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  359 bits (922), Expect = 7e-97
 Identities = 181/218 (83%), Positives = 200/218 (91%), Gaps = 2/218 (0%)
 Frame = -1

Query: 995 KAGQEADSIPMPIVMIDQDSDSDATIVQLSFGDRLGALIDTMKALKDLGLDVAKGTVTTE 816
           K  Q+AD +P+P+V+IDQDSDS++TIVQLSFGDRLGALIDTM ALKDLGLDVAKGTV TE
Sbjct: 1   KPEQDADGVPIPVVLIDQDSDSESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTE 60

Query: 815 ASVLQTKFFITLLDTGRKVEDPDMLERIRLTIINNLLKYHPECSERLAMGEAFGIKAPEK 636
             V QTKFFIT LD+GRKVEDPDMLERIRLTIINNLLKYHPE SERLAMGEAFGIKAPEK
Sbjct: 61  GPVKQTKFFITRLDSGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEK 120

Query: 635 K--VNIATHIHVKADGPKRSLLYIETADRPGLLLEIIKIMADINVNVESAEIDTEGLVAK 462
           K  V+I TH+HVK DGPKRSLL +ETADRPGLL+EIIKI+AD+N++VESAEIDTEGLVAK
Sbjct: 121 KLDVDITTHVHVKEDGPKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAK 180

Query: 461 DTFHVSYQGAALNNSLSQVLINCLRYYLRRPETDEDSY 348
           D FHVSY GAALN+SLSQVL+NCLRYYLRRPETD +SY
Sbjct: 181 DKFHVSYGGAALNSSLSQVLVNCLRYYLRRPETDTESY 218


>gb|AFK35733.1| unknown [Lotus japonicus]
          Length = 282

 Score =  358 bits (918), Expect = 2e-96
 Identities = 187/246 (76%), Positives = 215/246 (87%), Gaps = 4/246 (1%)
 Frame = -1

Query: 1073 PSISRENKYVLRASVDSPKTMGSFS--SKAGQEADSIPMPIVMIDQDSDSDATIVQLSFG 900
            PS+SR NK +L AS      +GS S  SK  ++ +S+PMP+V+IDQDSDS+ATIVQLSFG
Sbjct: 38   PSLSR-NKNILNASAYDLNAVGSASLVSKFNRDHESVPMPMVLIDQDSDSEATIVQLSFG 96

Query: 899  DRLGALIDTMKALKDLGLDVAKGTVTTEASVLQTKFFITLLDTGRKVEDPDMLERIRLTI 720
            DRLGALIDTMKALKDLGLDV+KGTV+TE SV QTKFFIT  +TGRKVEDPDMLERIRLTI
Sbjct: 97   DRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVEDPDMLERIRLTI 156

Query: 719  INNLLKYHPECSERLAMGEAFGIKAPEKKVNI--ATHIHVKADGPKRSLLYIETADRPGL 546
            I+NLLKYHPE SE+LAMGE FGIKAP KK+++  AT I VK DGPKRSLLYIETADRPGL
Sbjct: 157  ISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQVKEDGPKRSLLYIETADRPGL 216

Query: 545  LLEIIKIMADINVNVESAEIDTEGLVAKDTFHVSYQGAALNNSLSQVLINCLRYYLRRPE 366
            L+EIIK++AD+N++VESAEIDTEGL+AKD FHVSY GAALN+S+SQVL+NCLRYYLR PE
Sbjct: 217  LVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVSYGGAALNSSMSQVLVNCLRYYLRTPE 276

Query: 365  TDEDSY 348
            TD DSY
Sbjct: 277  TDIDSY 282