BLASTX nr result

ID: Coptis21_contig00003919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003919
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272710.1| PREDICTED: membrane-anchored ubiquitin-fold ...   202   8e-50
ref|NP_001236458.1| uncharacterized protein LOC100500075 [Glycin...   197   3e-48
ref|XP_004161510.1| PREDICTED: membrane-anchored ubiquitin-fold ...   197   3e-48
ref|XP_002300129.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48
gb|AFK46010.1| unknown [Lotus japonicus]                              196   8e-48

>ref|XP_002272710.1| PREDICTED: membrane-anchored ubiquitin-fold protein 4 [Vitis
           vinifera] gi|296082312|emb|CBI21317.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score =  202 bits (514), Expect = 8e-50
 Identities = 101/118 (85%), Positives = 106/118 (89%), Gaps = 1/118 (0%)
 Frame = -2

Query: 747 MTEEELVELKFRLYDGSDIGPIRYSSASTVAMLKERIIAEWPKDKKVIPKTANDVKLICA 568
           M EE+LVELKFRLYDGSDIGP RYS  STVAMLKERI+ EWPK+KK+ PK ANDVKLI A
Sbjct: 1   MPEEDLVELKFRLYDGSDIGPFRYSPTSTVAMLKERIVTEWPKEKKIAPKAANDVKLISA 60

Query: 567 GKILENNKTVGQCRVPFAELPGGVITMHVVVQPSLAKIKTEKKVDE-PKKSVCSCSIL 397
           GKILENNKTVGQCRVPF ELP GVITMHVVVQPSLAK KTEKKVDE PKK+VCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPSLAKAKTEKKVDEAPKKNVCSCSIL 118


>ref|NP_001236458.1| uncharacterized protein LOC100500075 [Glycine max]
           gi|255628975|gb|ACU14832.1| unknown [Glycine max]
          Length = 118

 Score =  197 bits (501), Expect = 3e-48
 Identities = 96/118 (81%), Positives = 106/118 (89%), Gaps = 1/118 (0%)
 Frame = -2

Query: 747 MTEEELVELKFRLYDGSDIGPIRYSSASTVAMLKERIIAEWPKDKKVIPKTANDVKLICA 568
           M EEE+VELKFRLYDGSDIGP RYS AST+AMLK+RI A+WPKDKK+IPK AND+KLI A
Sbjct: 1   MPEEEVVELKFRLYDGSDIGPFRYSPASTIAMLKDRIFADWPKDKKIIPKAANDIKLISA 60

Query: 567 GKILENNKTVGQCRVPFAELPGGVITMHVVVQPSLAKIKTEKKVDE-PKKSVCSCSIL 397
           GKILEN+KTVGQCRVPF ELP GVITMHVVVQPSL K KTEKKVDE P+K +C+CSIL
Sbjct: 61  GKILENHKTVGQCRVPFGELPKGVITMHVVVQPSLLKAKTEKKVDEVPRKHICACSIL 118


>ref|XP_004161510.1| PREDICTED: membrane-anchored ubiquitin-fold protein 4-like isoform
           3 [Cucumis sativus] gi|449501982|ref|XP_004161511.1|
           PREDICTED: membrane-anchored ubiquitin-fold protein
           4-like isoform 4 [Cucumis sativus]
          Length = 118

 Score =  197 bits (500), Expect = 3e-48
 Identities = 96/118 (81%), Positives = 107/118 (90%), Gaps = 1/118 (0%)
 Frame = -2

Query: 747 MTEEELVELKFRLYDGSDIGPIRYSSASTVAMLKERIIAEWPKDKKVIPKTANDVKLICA 568
           M +E+L+ELKFRLYDGSDIGP RYS  ST+AM+KERI+AEWPKDKKVIPK ANDVKLI A
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINA 60

Query: 567 GKILENNKTVGQCRVPFAELPGGVITMHVVVQPSLAKIKTEKKVDE-PKKSVCSCSIL 397
           GKILENNKTVGQCRVPF +LP GVITMHVVVQP++AK K+EKKVDE P K+VCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKSEKKVDETPTKNVCSCSIL 118


>ref|XP_002300129.1| predicted protein [Populus trichocarpa] gi|222847387|gb|EEE84934.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score =  197 bits (500), Expect = 3e-48
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = -2

Query: 741 EEELVELKFRLYDGSDIGPIRYSSASTVAMLKERIIAEWPKDKKVIPKTANDVKLICAGK 562
           EEELVELKFRLYDGSDIGP RYS ASTVAMLKERI+A+WPKDKK+ PK ANDVKLI AGK
Sbjct: 4   EEELVELKFRLYDGSDIGPFRYSPASTVAMLKERIVADWPKDKKIAPKAANDVKLINAGK 63

Query: 561 ILENNKTVGQCRVPFAELPGGVITMHVVVQPSLAKIKTEKKVDE-PKKSVCSCSIL 397
           ILENNKTVGQCRVPF +LP GVITMHVVVQPSLAK K EKKVD+ P+K  CSCSIL
Sbjct: 64  ILENNKTVGQCRVPFGDLPKGVITMHVVVQPSLAKAKAEKKVDDAPRKKFCSCSIL 119


>gb|AFK46010.1| unknown [Lotus japonicus]
          Length = 118

 Score =  196 bits (497), Expect = 8e-48
 Identities = 95/118 (80%), Positives = 105/118 (88%), Gaps = 1/118 (0%)
 Frame = -2

Query: 747 MTEEELVELKFRLYDGSDIGPIRYSSASTVAMLKERIIAEWPKDKKVIPKTANDVKLICA 568
           M EEELVELKFR+YDGSDIGP RYS  STVAMLK+RI+AEWPKDKK+IPK AND+KLI A
Sbjct: 1   MPEEELVELKFRIYDGSDIGPFRYSPTSTVAMLKDRILAEWPKDKKIIPKAANDIKLISA 60

Query: 567 GKILENNKTVGQCRVPFAELPGGVITMHVVVQPSLAKIKTEKKVDE-PKKSVCSCSIL 397
           GKILENNKTVGQCRVPF ELP  VITMHVVVQPSL K KTEKK+DE P+K +C+CSI+
Sbjct: 61  GKILENNKTVGQCRVPFGELPPAVITMHVVVQPSLTKAKTEKKLDEAPRKHLCACSIM 118


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