BLASTX nr result

ID: Coptis21_contig00003913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003913
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_003602234.1| Zinc finger protein CONSTANS-like protein [M...    96   4e-18
gb|EAY99274.1| hypothetical protein OsI_21238 [Oryza sativa Indi...    96   4e-18
ref|NP_001056514.1| Os05g0595300 [Oryza sativa Japonica Group] g...    96   4e-18

>ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|222868411|gb|EEF05542.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/75 (62%), Positives = 60/75 (80%)
 Frame = +2

Query: 2   NFLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNVVHSSIERTCSIGNYAIEERLQKLSR 181
           +FLDF G+DFE  YGMRRAYSEGD++TL  GN +++HS+++R   I N + E+R +KLSR
Sbjct: 210 SFLDFPGIDFENAYGMRRAYSEGDIKTLGNGNPSLIHSTLDRPLIINNCSAEDRREKLSR 269

Query: 182 YRKKKTKRNFGRTIK 226
           YR KKTKRNFGR IK
Sbjct: 270 YRNKKTKRNFGRKIK 284


>ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|222859086|gb|EEE96633.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/75 (62%), Positives = 60/75 (80%)
 Frame = +2

Query: 2   NFLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNVVHSSIERTCSIGNYAIEERLQKLSR 181
           +FLDF G+DFE  YGMRRA+SEGD++TL  GNT+++ S ++R   I NY+ E+R +KLSR
Sbjct: 175 SFLDFPGIDFENAYGMRRAFSEGDIKTLGNGNTSLICSPLDRPLIINNYSAEDRQEKLSR 234

Query: 182 YRKKKTKRNFGRTIK 226
           YR KKTKRNFGR IK
Sbjct: 235 YRNKKTKRNFGRKIK 249


>ref|XP_003602234.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355491282|gb|AES72485.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
          Length = 281

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/74 (62%), Positives = 54/74 (72%)
 Frame = +2

Query: 5   FLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNVVHSSIERTCSIGNYAIEERLQKLSRY 184
           FL   G+DF+ VYGMRR++SEGD++T    N NVV S +ER     N + EERLQKLSRY
Sbjct: 178 FLGISGIDFDAVYGMRRSFSEGDIKTFGNANMNVVQSPVERPFFTSNCSSEERLQKLSRY 237

Query: 185 RKKKTKRNFGRTIK 226
           R KKTKRNFGR IK
Sbjct: 238 RNKKTKRNFGRKIK 251


>gb|EAY99274.1| hypothetical protein OsI_21238 [Oryza sativa Indica Group]
           gi|222632787|gb|EEE64919.1| hypothetical protein
           OsJ_19779 [Oryza sativa Japonica Group]
          Length = 304

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 6/81 (7%)
 Frame = +2

Query: 2   NFLDFQGVDFETVYGMRRAYSEGDMQTLS-----PGNT-NVVHSSIERTCSIGNYAIEER 163
           NFLDFQG+DFET +G+RRAYSEGD+Q L      PGN+ N   +S ER  +I +   EER
Sbjct: 193 NFLDFQGLDFETAFGLRRAYSEGDIQNLGASTPRPGNSGNAQLASCERLVTISDLKSEER 252

Query: 164 LQKLSRYRKKKTKRNFGRTIK 226
            QKLSRYRKKK KRNFGR IK
Sbjct: 253 KQKLSRYRKKKVKRNFGRKIK 273


>ref|NP_001056514.1| Os05g0595300 [Oryza sativa Japonica Group]
           gi|113580065|dbj|BAF18428.1| Os05g0595300 [Oryza sativa
           Japonica Group]
          Length = 308

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 6/81 (7%)
 Frame = +2

Query: 2   NFLDFQGVDFETVYGMRRAYSEGDMQTLS-----PGNT-NVVHSSIERTCSIGNYAIEER 163
           NFLDFQG+DFET +G+RRAYSEGD+Q L      PGN+ N   +S ER  +I +   EER
Sbjct: 197 NFLDFQGLDFETAFGLRRAYSEGDIQNLGASTPRPGNSGNAQLASCERLVTISDLKSEER 256

Query: 164 LQKLSRYRKKKTKRNFGRTIK 226
            QKLSRYRKKK KRNFGR IK
Sbjct: 257 KQKLSRYRKKKVKRNFGRKIK 277


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