BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003882
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   129   2e-28
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   122   4e-26
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   121   5e-26
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   121   5e-26
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             118   4e-25

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/125 (48%), Positives = 86/125 (68%)
 Frame = -2

Query: 380 PQTHVRDLNILASVITDEQNNDLTREVTLEEVKEALFSMDPHKAPGPDGFTPLFYKKYWD 201
           PQ     L  +  +IT+E N  LT+ ++ EEVK ALFS++P KAPGPDG T  FY+ YWD
Sbjct: 349 PQVFDSALQEVPVLITEEMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWD 408

Query: 200 IISSDLLNTIKSFMNSDHILAELNHTNITLIPKCQRPETLDQFQPISLCNVSLRIISKIL 21
           +   DL+  +++F ++      LN TNI LIPK +RP  + +F+PISLCNVS ++ISK+L
Sbjct: 409 LTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVL 468

Query: 20  ANRIK 6
           ++R+K
Sbjct: 469 SSRLK 473


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/108 (52%), Positives = 73/108 (67%)
 Frame = -2

Query: 326 QNNDLTREVTLEEVKEALFSMDPHKAPGPDGFTPLFYKKYWDIISSDLLNTIKSFMNSDH 147
           Q  DL + VT EEV+  +F M   KAPGPDG   +FY+K+W I+  D+   +  F  + +
Sbjct: 433 QREDLIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGY 492

Query: 146 ILAELNHTNITLIPKCQRPETLDQFQPISLCNVSLRIISKILANRIKP 3
           IL E N TNI LIPK +RPE   QF+PISLCNV  +IISKI+ANR+KP
Sbjct: 493 ILQEWNQTNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKP 540


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  121 bits (304), Expect = 5e-26
 Identities = 51/119 (42%), Positives = 82/119 (68%)
 Frame = -2

Query: 362 DLNILASVITDEQNNDLTREVTLEEVKEALFSMDPHKAPGPDGFTPLFYKKYWDIISSDL 183
           D N+L+ ++++  N  LT  V+ EE+K A+F + P K+PGPDGF P F++KYW +I   +
Sbjct: 424 DFNLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSV 483

Query: 182 LNTIKSFMNSDHILAELNHTNITLIPKCQRPETLDQFQPISLCNVSLRIISKILANRIK 6
              +++F +S ++L E+NHT + LIPK  +P   + F+PISLC+   ++ISKI+ NR+K
Sbjct: 484 CRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLK 542


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/106 (50%), Positives = 77/106 (72%)
 Frame = -2

Query: 323 NNDLTREVTLEEVKEALFSMDPHKAPGPDGFTPLFYKKYWDIISSDLLNTIKSFMNSDHI 144
           N  LT+ ++ EEVK ALFS++P KAPGPDG T  FY+ YWD+   DL+  +++F ++   
Sbjct: 2   NKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFF 61

Query: 143 LAELNHTNITLIPKCQRPETLDQFQPISLCNVSLRIISKILANRIK 6
              LN TNI LIPK +RP  + +F+PISLCNVS ++ISK+L++R+K
Sbjct: 62  DERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLK 107


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/125 (48%), Positives = 80/125 (64%)
 Frame = -2

Query: 380 PQTHVRDLNILASVITDEQNNDLTREVTLEEVKEALFSMDPHKAPGPDGFTPLFYKKYWD 201
           PQ     L+ + ++ITD+ N+ LT   T +EV+ ALF M P KAPGPDG T LF++K W 
Sbjct: 252 PQNIAESLSEVKTLITDQINDFLTTPATEDEVRAALFLMHPEKAPGPDGMTALFFQKPWA 311

Query: 200 IISSDLLNTIKSFMNSDHILAELNHTNITLIPKCQRPETLDQFQPISLCNVSLRIISKIL 21
            I  D+L  + SF+       +LN TNI LIPK +RP  + + +PISLCNV  +IISKIL
Sbjct: 312 TIKMDMLFLVNSFLQDGVFDKQLNTTNICLIPKTERPTRMTELRPISLCNVGYKIISKIL 371

Query: 20  ANRIK 6
             R+K
Sbjct: 372 CQRLK 376