BLASTX nr result
ID: Coptis21_contig00003869
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003869
(1697 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera] 674 0.0
emb|CBI16013.3| unnamed protein product [Vitis vinifera] 674 0.0
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223... 659 0.0
ref|XP_002313400.1| predicted protein [Populus trichocarpa] gi|2... 652 0.0
ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max] 628 e-177
>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
Length = 1379
Score = 674 bits (1738), Expect = 0.0
Identities = 339/442 (76%), Positives = 386/442 (87%)
Frame = +3
Query: 3 IIQSSASQQFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIIFVLRPDLPSTFQNSS 182
++QSSA+QQFL+ GRVVVVKSQS +DHL+GVV+K PSAS KQYI+ VL+P LPST Q S
Sbjct: 938 VMQSSAAQQFLTLGRVVVVKSQSVQDHLIGVVVKAPSASSKQYIVLVLKPHLPSTLQTPS 997
Query: 183 PTEIPQEKGSGNEQQGYFITPKSKRGLDDDYFSSVTPRKGSGAVNITLPHRGSAAGMSFE 362
+ Q+K SG +G+FI PK+KR L+DDY++S T RK SG +NI LP+ G+AAG+S+E
Sbjct: 998 ESGNLQDKKSGAFPEGHFILPKAKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYE 1057
Query: 363 VIGIEPVEFLSICKCKIKIDQGRLLEDGSNAAYSKTVQQLLGQKSGGNKYPPALDPISDL 542
V GI+ EFL IC KIKID LLED +NAAYSKTVQQLL KS G+KYPPALDP+ DL
Sbjct: 1058 VRGIDNKEFLCICIHKIKIDPVGLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDL 1117
Query: 543 KLKDILLVEAYNKWNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEA 722
KLKD+ LVE Y KWNS+LQKMA+NKCH C KL+EH L KE+ +H++EV ALRFQMSDEA
Sbjct: 1118 KLKDMTLVETYYKWNSLLQKMADNKCHECVKLEEHIKLAKELKRHKEEVNALRFQMSDEA 1177
Query: 723 LQQMPDFQGRIDVLKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEE 902
LQQMPDFQGRIDVL+EIGCID+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEE
Sbjct: 1178 LQQMPDFQGRIDVLQEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEE 1237
Query: 903 AVALMSALVFQQKNTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLK 1082
AVALMSALVFQQKNTSEPSLTPKL+ AK+RLY+TAI LG+LQ FK+QI+PE+YA DNLK
Sbjct: 1238 AVALMSALVFQQKNTSEPSLTPKLSQAKQRLYNTAIRLGELQAQFKLQISPEEYAQDNLK 1297
Query: 1083 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1262
FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM
Sbjct: 1298 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1357
Query: 1263 ETASNAIKRDIVFAASLYVTGV 1328
E ASNAIKRDIVFAASLY+TG+
Sbjct: 1358 EAASNAIKRDIVFAASLYITGL 1379
>emb|CBI16013.3| unnamed protein product [Vitis vinifera]
Length = 1082
Score = 674 bits (1738), Expect = 0.0
Identities = 339/442 (76%), Positives = 386/442 (87%)
Frame = +3
Query: 3 IIQSSASQQFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIIFVLRPDLPSTFQNSS 182
++QSSA+QQFL+ GRVVVVKSQS +DHL+GVV+K PSAS KQYI+ VL+P LPST Q S
Sbjct: 641 VMQSSAAQQFLTLGRVVVVKSQSVQDHLIGVVVKAPSASSKQYIVLVLKPHLPSTLQTPS 700
Query: 183 PTEIPQEKGSGNEQQGYFITPKSKRGLDDDYFSSVTPRKGSGAVNITLPHRGSAAGMSFE 362
+ Q+K SG +G+FI PK+KR L+DDY++S T RK SG +NI LP+ G+AAG+S+E
Sbjct: 701 ESGNLQDKKSGAFPEGHFILPKAKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYE 760
Query: 363 VIGIEPVEFLSICKCKIKIDQGRLLEDGSNAAYSKTVQQLLGQKSGGNKYPPALDPISDL 542
V GI+ EFL IC KIKID LLED +NAAYSKTVQQLL KS G+KYPPALDP+ DL
Sbjct: 761 VRGIDNKEFLCICIHKIKIDPVGLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDL 820
Query: 543 KLKDILLVEAYNKWNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEA 722
KLKD+ LVE Y KWNS+LQKMA+NKCH C KL+EH L KE+ +H++EV ALRFQMSDEA
Sbjct: 821 KLKDMTLVETYYKWNSLLQKMADNKCHECVKLEEHIKLAKELKRHKEEVNALRFQMSDEA 880
Query: 723 LQQMPDFQGRIDVLKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEE 902
LQQMPDFQGRIDVL+EIGCID+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEE
Sbjct: 881 LQQMPDFQGRIDVLQEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEE 940
Query: 903 AVALMSALVFQQKNTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLK 1082
AVALMSALVFQQKNTSEPSLTPKL+ AK+RLY+TAI LG+LQ FK+QI+PE+YA DNLK
Sbjct: 941 AVALMSALVFQQKNTSEPSLTPKLSQAKQRLYNTAIRLGELQAQFKLQISPEEYAQDNLK 1000
Query: 1083 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1262
FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM
Sbjct: 1001 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1060
Query: 1263 ETASNAIKRDIVFAASLYVTGV 1328
E ASNAIKRDIVFAASLY+TG+
Sbjct: 1061 EAASNAIKRDIVFAASLYITGL 1082
>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
helicase, putative [Ricinus communis]
Length = 1335
Score = 659 bits (1700), Expect = 0.0
Identities = 334/442 (75%), Positives = 384/442 (86%)
Frame = +3
Query: 3 IIQSSASQQFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIIFVLRPDLPSTFQNSS 182
++QSSA+QQFL+PGRVVVVKSQS +DHLLGVV+K PS S KQYI+ VL+PDLPS+ Q S+
Sbjct: 899 VMQSSAAQQFLTPGRVVVVKSQSGQDHLLGVVVKGPSTSMKQYIVLVLKPDLPSSTQISN 958
Query: 183 PTEIPQEKGSGNEQQGYFITPKSKRGLDDDYFSSVTPRKGSGAVNITLPHRGSAAGMSFE 362
Q+K SG+ + Y + PKSKRG +++YF S RKGSGAVNI LP++G+AAG+++E
Sbjct: 959 L----QDKKSGDIPKAYLLMPKSKRG-EEEYFYSTASRKGSGAVNIKLPYQGTAAGVNYE 1013
Query: 363 VIGIEPVEFLSICKCKIKIDQGRLLEDGSNAAYSKTVQQLLGQKSGGNKYPPALDPISDL 542
V G++ EFL IC K+KIDQ LLED SN A+SKTVQQL KS GNKYPPALDP++DL
Sbjct: 1014 VRGMDNTEFLCICARKLKIDQVGLLEDVSNTAFSKTVQQLSELKSDGNKYPPALDPLTDL 1073
Query: 543 KLKDILLVEAYNKWNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEA 722
K+KD+ LVEAY KW S+LQKMA NKCHGC KL+EH L KEI KH+DE+ LRFQMSDEA
Sbjct: 1074 KMKDVNLVEAYKKWTSLLQKMARNKCHGCIKLEEHLNLAKEIKKHKDEIDKLRFQMSDEA 1133
Query: 723 LQQMPDFQGRIDVLKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEE 902
LQQMPDFQGRIDVLKEIGCID+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEE
Sbjct: 1134 LQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEE 1193
Query: 903 AVALMSALVFQQKNTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLK 1082
AVA+MSA VFQQ+NTSEPSLTPKL+ AKKRLYDTAI LG+LQ K+QINPE+YA +NLK
Sbjct: 1194 AVAIMSAFVFQQRNTSEPSLTPKLSKAKKRLYDTAIRLGELQVKNKLQINPEEYAQENLK 1253
Query: 1083 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1262
FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREF+NAA+IMGNS+L+KKM
Sbjct: 1254 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFKNAASIMGNSSLYKKM 1313
Query: 1263 ETASNAIKRDIVFAASLYVTGV 1328
E ASNAIKRDIVFAASLY+TGV
Sbjct: 1314 EAASNAIKRDIVFAASLYITGV 1335
>ref|XP_002313400.1| predicted protein [Populus trichocarpa] gi|222849808|gb|EEE87355.1|
predicted protein [Populus trichocarpa]
Length = 943
Score = 652 bits (1682), Expect = 0.0
Identities = 330/442 (74%), Positives = 378/442 (85%)
Frame = +3
Query: 3 IIQSSASQQFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIIFVLRPDLPSTFQNSS 182
++QS +Q FL+PGRVVVVKS S DHLLGVV+K+ SAS KQYI+ VL+PD PS N
Sbjct: 510 VMQSPHAQTFLTPGRVVVVKSLS--DHLLGVVVKVTSASMKQYIVLVLKPDAPSVSSNL- 566
Query: 183 PTEIPQEKGSGNEQQGYFITPKSKRGLDDDYFSSVTPRKGSGAVNITLPHRGSAAGMSFE 362
Q+K S + QQGY + PKSKR D++YFSS+T RKGSG + I LP++G AAG+++E
Sbjct: 567 -----QDKKSADFQQGYVLMPKSKRSCDEEYFSSLTNRKGSGTIKIELPYQGVAAGINYE 621
Query: 363 VIGIEPVEFLSICKCKIKIDQGRLLEDGSNAAYSKTVQQLLGQKSGGNKYPPALDPISDL 542
V GIE EFL IC KI IDQ RLLEDGSNAA+SKTVQQLL KS GNKYPPALDP+ +L
Sbjct: 622 VRGIESKEFLCICNRKITIDQVRLLEDGSNAAFSKTVQQLLETKSDGNKYPPALDPLKEL 681
Query: 543 KLKDILLVEAYNKWNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEA 722
KLKD+ LVEAY+KW S+LQKMA NKCHGC KL+EH L KEI +H++EV L+FQMSDEA
Sbjct: 682 KLKDVNLVEAYHKWTSLLQKMASNKCHGCIKLEEHISLAKEIKRHKEEVSNLQFQMSDEA 741
Query: 723 LQQMPDFQGRIDVLKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEE 902
LQQMPDFQGRI VLKEIGCID DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEE
Sbjct: 742 LQQMPDFQGRIYVLKEIGCIDGDLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEE 801
Query: 903 AVALMSALVFQQKNTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLK 1082
AVA+MSA VFQQ+ TSEPSLTP+L+ AKKRLY TAI LG+LQ ++ +Q+NPE+YAN+NLK
Sbjct: 802 AVAIMSAFVFQQRKTSEPSLTPRLSQAKKRLYSTAIRLGELQSNYNIQVNPEEYANENLK 861
Query: 1083 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1262
FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREF+NAAAIMGNSA++KKM
Sbjct: 862 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSAVYKKM 921
Query: 1263 ETASNAIKRDIVFAASLYVTGV 1328
E+ASNAIKRDIVFAASLYVTGV
Sbjct: 922 ESASNAIKRDIVFAASLYVTGV 943
>ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
Length = 1342
Score = 628 bits (1619), Expect = e-177
Identities = 312/442 (70%), Positives = 372/442 (84%)
Frame = +3
Query: 3 IIQSSASQQFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIIFVLRPDLPSTFQNSS 182
I+QS ++QQFL+ GRVV+VKS+SA+DHLLGVV++ PS + K YI+FV++PD+PS+ N+S
Sbjct: 902 ILQSPSAQQFLNTGRVVIVKSESAQDHLLGVVVETPSPTNKMYIVFVIKPDMPSSVDNAS 961
Query: 183 PTEIPQEKGSGNEQQGYFITPKSKRGLDDDYFSSVTPRKGSGAVNITLPHRGSAAGMSFE 362
+ Q K SG QGYF+ PKS+R + D+Y +SV+ RKG G + I LP+ GSA GM +E
Sbjct: 962 SSGNMQNK-SGAFDQGYFVMPKSRRVVVDEYSTSVSARKGKGVITIRLPYSGSACGMGYE 1020
Query: 363 VIGIEPVEFLSICKCKIKIDQGRLLEDGSNAAYSKTVQQLLGQKSGGNKYPPALDPISDL 542
V ++ EFL IC KIKID+ LLED S++ YSKTVQ L+ KS GNKYPPALDP+ DL
Sbjct: 1021 VREVDSKEFLCICSSKIKIDRVGLLEDISSSVYSKTVQLLMDLKSDGNKYPPALDPVKDL 1080
Query: 543 KLKDILLVEAYNKWNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEA 722
KL+D+ LV Y+KW +L+KM++N+CHGC KL+EH L KEI KH++EV AL+FQMSDEA
Sbjct: 1081 KLRDVKLVATYHKWTRLLEKMSQNQCHGCIKLEEHLKLAKEIKKHKEEVYALQFQMSDEA 1140
Query: 723 LQQMPDFQGRIDVLKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEE 902
L+QMPDFQGRIDVLK+IGCID DLVVQ+KGRVACEMNSGEELI TECLF+NQ+++LEPEE
Sbjct: 1141 LKQMPDFQGRIDVLKQIGCIDEDLVVQMKGRVACEMNSGEELICTECLFENQMDELEPEE 1200
Query: 903 AVALMSALVFQQKNTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLK 1082
AVA+MSA VFQQKNTSEPSLTPKL+ AK RLY TAI LG+LQ HF + INP +YA +NLK
Sbjct: 1201 AVAIMSAFVFQQKNTSEPSLTPKLSEAKHRLYQTAIRLGELQAHFNLPINPAEYAQENLK 1260
Query: 1083 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKM 1262
FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREF+NAAAIMGNSAL KKM
Sbjct: 1261 FGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALCKKM 1320
Query: 1263 ETASNAIKRDIVFAASLYVTGV 1328
E ASNAIKRDIVFAASLY+TGV
Sbjct: 1321 EIASNAIKRDIVFAASLYITGV 1342