BLASTX nr result

ID: Coptis21_contig00003838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003838
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608535.1| Histone H3 [Medicago truncatula] gi|35550959...   142   4e-35
gb|EAY99520.1| hypothetical protein OsI_21490 [Oryza sativa Indi...   142   4e-35
gb|AFW86016.1| histone H3 [Zea mays]                                  142   4e-35
ref|XP_002868941.1| F10A5.19 [Arabidopsis lyrata subsp. lyrata] ...   142   4e-35
gb|AFW86017.1| histone H3 [Zea mays]                                  142   4e-35

>ref|XP_003608535.1| Histone H3 [Medicago truncatula] gi|355509590|gb|AES90732.1|
           Histone H3 [Medicago truncatula]
          Length = 391

 Score =  142 bits (359), Expect(2) = 4e-35
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 310 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 369

Query: 183 AKRVTIMPKDIQ 218
           AKRVTIMPKDIQ
Sbjct: 370 AKRVTIMPKDIQ 381



 Score = 30.4 bits (67), Expect(2) = 4e-35
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 292 KDIQLARRIRGERA 333
           KDIQLARRIRGERA
Sbjct: 378 KDIQLARRIRGERA 391



 Score =  142 bits (359), Expect(2) = 1e-34
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 96  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 155

Query: 183 AKRVTIMPKDIQ 218
           AKRVTIMPKDIQ
Sbjct: 156 AKRVTIMPKDIQ 167



 Score = 28.9 bits (63), Expect(2) = 1e-34
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +1

Query: 292 KDIQLARRIRGER 330
           KDIQLARRIRGER
Sbjct: 164 KDIQLARRIRGER 176


>gb|EAY99520.1| hypothetical protein OsI_21490 [Oryza sativa Indica Group]
          Length = 380

 Score =  142 bits (359), Expect(2) = 4e-35
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 299 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 358

Query: 183 AKRVTIMPKDIQ 218
           AKRVTIMPKDIQ
Sbjct: 359 AKRVTIMPKDIQ 370



 Score = 30.4 bits (67), Expect(2) = 4e-35
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 292 KDIQLARRIRGERA 333
           KDIQLARRIRGERA
Sbjct: 367 KDIQLARRIRGERA 380


>gb|AFW86016.1| histone H3 [Zea mays]
          Length = 247

 Score =  142 bits (359), Expect(2) = 4e-35
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 166 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 225

Query: 183 AKRVTIMPKDIQ 218
           AKRVTIMPKDIQ
Sbjct: 226 AKRVTIMPKDIQ 237



 Score = 30.4 bits (67), Expect(2) = 4e-35
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 292 KDIQLARRIRGERA 333
           KDIQLARRIRGERA
Sbjct: 234 KDIQLARRIRGERA 247


>ref|XP_002868941.1| F10A5.19 [Arabidopsis lyrata subsp. lyrata]
           gi|297314777|gb|EFH45200.1| F10A5.19 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 229

 Score =  142 bits (359), Expect(2) = 4e-35
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 148 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 207

Query: 183 AKRVTIMPKDIQ 218
           AKRVTIMPKDIQ
Sbjct: 208 AKRVTIMPKDIQ 219



 Score = 30.4 bits (67), Expect(2) = 4e-35
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 292 KDIQLARRIRGERA 333
           KDIQLARRIRGERA
Sbjct: 216 KDIQLARRIRGERA 229



 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 55  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 114

Query: 183 AKR 191
           AKR
Sbjct: 115 AKR 117


>gb|AFW86017.1| histone H3 [Zea mays]
          Length = 227

 Score =  142 bits (359), Expect(2) = 4e-35
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +3

Query: 3   YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 182
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 146 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 205

Query: 183 AKRVTIMPKDIQ 218
           AKRVTIMPKDIQ
Sbjct: 206 AKRVTIMPKDIQ 217



 Score = 30.4 bits (67), Expect(2) = 4e-35
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 292 KDIQLARRIRGERA 333
           KDIQLARRIRGERA
Sbjct: 214 KDIQLARRIRGERA 227


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