BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003582
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90288.2| Polyprotein, putative [Solanum demissum]                96   3e-17
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               95   3e-17
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    94   6e-17
emb|CCH50966.1| T4.5 [Malus x robusta]                                 93   2e-16
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    91   5e-16

>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
 Frame = -3

Query: 832  NSHKIKEWHNKTYHQI*VTNHPLPQAVLSQMKDSPTT----PTCYSKAVKDPKWREAMAL 665
            N H     H+  +          P+   S    +PT+    P+C+S+A+KD  WR AM+ 
Sbjct: 595  NPHSSNTSHSGDFGNTSAVGSLKPKKPFSMSTTTPTSAIVEPSCHSRAIKDVHWRHAMSE 654

Query: 664  EIIALQ*TGT*ELGSAELVPYDPSQNIVRNKWVSRIKYRPTRLVDKFKARLVAKGYH*QK 485
            E  AL   GT      ELVP  PSQNI+  KWV + K +    +D++KARLVAKGYH + 
Sbjct: 655  EYNALIQNGT-----WELVPLSPSQNIIGCKWVFKRKLKSDGSLDRYKARLVAKGYHQRP 709

Query: 484  EINYI*TFSLVVKPHTIR------VSFPWH 413
             +++  TFS VVKP TIR      VS  WH
Sbjct: 710  GLDFADTFSPVVKPATIRLLLSLAVSHQWH 739


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 76/201 (37%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
 Frame = -3

Query: 979  SFVRTSSCDSTFKLSPANSKLLTFI*ITSNSTFKSSCISHL-----TIINSNN-----FN 830
            SF  +S   S    SP N  + T I  +S+ T  +S I+H      T + +NN      +
Sbjct: 775  SFGDSSQSQSPSSSSPPNQSIPTLISPSSSQT-DASPITHTDPHSSTSLPTNNPIPPLLS 833

Query: 829  SHKIKEWHN------KTYHQI*VTNHPLPQ-AVLSQMKDSPTTPTCYSKAVKDPKWREAM 671
            S  + +  N      ++ H I   + P P+ A+ S +   P  PTCY++A K P+WREAM
Sbjct: 834  SPLVSQVQNHGDIVTRSKHGI---SKPNPKYAMHSTLLALPLEPTCYTQAAKYPEWREAM 890

Query: 670  ALEIIALQ*TGT*ELGSAELVPYDPSQNIVRNKWVSRIKYRPTRLVDKFKARLVAKGYH* 491
              E  ALQ     + G+  LVP     NI+ NKWV RIK R    V+++KARLVA G+H 
Sbjct: 891  DHEFKALQ-----QAGTWFLVPPSSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQ 945

Query: 490  QKEINYI*TFSLVVKPHTIRV 428
            Q+ ++Y  TFS VVK  TIR+
Sbjct: 946  QEGLDYTETFSPVVKHSTIRL 966


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 54/99 (54%), Positives = 67/99 (67%)
 Frame = -3

Query: 730 PTTPTCYSKAVKDPKWREAMALEIIALQ*TGT*ELGSAELVPYDPSQNIVRNKWVSRIKY 551
           PTTPT   +A+KDPKWR+AM+ E  AL   GT      ELVP +PSQN+V  KW+ R K 
Sbjct: 656 PTTPT---QALKDPKWRKAMSEEYDALVRNGT-----WELVPSNPSQNVVGCKWIFRTKR 707

Query: 550 RPTRLVDKFKARLVAKGYH*QKEINYI*TFSLVVKPHTI 434
                +D+FKARLVAKG+H + +I+Y  TFS VVKP TI
Sbjct: 708 NSDGSIDRFKARLVAKGFHQRPDIDYYDTFSPVVKPTTI 746


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 53/117 (45%), Positives = 72/117 (61%)
 Frame = -3

Query: 778  TNHPLPQAVLSQMKDSPTTPTCYSKAVKDPKWREAMALEIIALQ*TGT*ELGSAELVPYD 599
            T H LP  V S +   P TP+ + +A K   W EAM  E  ALQ TGT      ELVP  
Sbjct: 1131 TKHQLPSTVDS-LTALPPTPSTFLQASKSSHWMEAMQFEFQALQSTGT-----WELVPNH 1184

Query: 598  PSQNIVRNKWVSRIKYRPTRLVDKFKARLVAKGYH*QKEINYI*TFSLVVKPHTIRV 428
             + NIV  KWV ++K++P   ++++KARLVAKG+H Q+ +++  TFS V KP TIR+
Sbjct: 1185 STYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRI 1241


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
 Frame = -3

Query: 769  PLPQAVLSQMKDSPTT-PTCYSKAVKDPKWREAMALEIIALQ*TGT*ELGSAELVPYDPS 593
            P+ +  L+     PT  PT  ++A+KDPKWR+A + E   L   GT      +LVP  P+
Sbjct: 796  PIQKLNLTAQLQQPTLEPTTVTQALKDPKWRQAXSAEFDXLLRNGT-----WDLVPSHPT 850

Query: 592  QNIVRNKWVSRIKYRPTRLVDKFKARLVAKGYH*QKEINYI*TFSLVVKPHTIRV 428
            QN+V  KW+ R KY P   +D++KARLVAKG+H +  ++Y  TFS  +KP T+R+
Sbjct: 851  QNLVGCKWIFRTKYLPNGSIDRYKARLVAKGFHQRPGVDYSETFSPXIKPTTVRL 905