BLASTX nr result

ID: Coptis21_contig00003468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003468
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279012.1| PREDICTED: uncharacterized protein LOC100249...   278   1e-72
emb|CAN67684.1| hypothetical protein VITISV_009913 [Vitis vinifera]   278   1e-72
ref|XP_002309200.1| predicted protein [Populus trichocarpa] gi|2...   228   2e-57
ref|XP_003547491.1| PREDICTED: uncharacterized protein LOC100815...   213   8e-53
gb|AFW83741.1| hypothetical protein ZEAMMB73_439096 [Zea mays]        212   1e-52

>ref|XP_002279012.1| PREDICTED: uncharacterized protein LOC100249046 [Vitis vinifera]
          Length = 1152

 Score =  278 bits (712), Expect = 1e-72
 Identities = 147/213 (69%), Positives = 155/213 (72%), Gaps = 2/213 (0%)
 Frame = +1

Query: 1    EKRKGKGSNR-CGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYC 177
            E+R+G+GS R CGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVERVFVPPKPKIY 
Sbjct: 944  ERRRGRGSGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYS 1003

Query: 178  TVPXXXXXXXXXXXTEPFA-EDAXXXXXXXXXXXXXSVAQFKITEVHVAGLKTEPGKKKL 354
            TV            +   A ED              ++ QFKITEVHVAGLKTEPGKKKL
Sbjct: 1004 TVSVVGNSKEEDDESVSVAKEDVKDEKKEEQISEEEAIPQFKITEVHVAGLKTEPGKKKL 1063

Query: 355  WGTSKQQQSGSRWLAATGMGKSNKHPFMKXXXXXXXXXXXXXXXXXXXXPGETLWSISSR 534
            WGTS QQQSGSRWL A GMGK+NKHPFMK                    PGETLWSISSR
Sbjct: 1064 WGTSTQQQSGSRWLLANGMGKNNKHPFMK----SKAVSKSTSPATTTVQPGETLWSISSR 1119

Query: 535  VHGTGAKWKELAALNPHIRNPNVIFPNEKIRLC 633
            VHGTGAKWKELAALNPHIRNPNVIFPNE IRLC
Sbjct: 1120 VHGTGAKWKELAALNPHIRNPNVIFPNETIRLC 1152


>emb|CAN67684.1| hypothetical protein VITISV_009913 [Vitis vinifera]
          Length = 1134

 Score =  278 bits (712), Expect = 1e-72
 Identities = 148/213 (69%), Positives = 156/213 (73%), Gaps = 2/213 (0%)
 Frame = +1

Query: 1    EKRKGKGSNR-CGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYC 177
            E+R+G+GS R CGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVERVFVPPKPKIY 
Sbjct: 926  ERRRGRGSGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYS 985

Query: 178  TVPXXXXXXXXXXXTEPFA-EDAXXXXXXXXXXXXXSVAQFKITEVHVAGLKTEPGKKKL 354
            TV            +   A ED              ++ QFKITEVHVAGLKTEPGKKKL
Sbjct: 986  TVSXVGNSKEEDDESVSVAKEDVKDEKKEEQISEEEAIPQFKITEVHVAGLKTEPGKKKL 1045

Query: 355  WGTSKQQQSGSRWLAATGMGKSNKHPFMKXXXXXXXXXXXXXXXXXXXXPGETLWSISSR 534
            WGTS QQQSGSRWL A GMGK+NKHPFMK                    PGETLWSISSR
Sbjct: 1046 WGTSTQQQSGSRWLLANGMGKNNKHPFMK----SKAVSKSTSPATTTVQPGETLWSISSR 1101

Query: 535  VHGTGAKWKELAALNPHIRNPNVIFPNEKIRLC 633
            VHGTGAKWKELAALNPHIRNPNVIFPNE IRLC
Sbjct: 1102 VHGTGAKWKELAALNPHIRNPNVIFPNETIRLC 1134


>ref|XP_002309200.1| predicted protein [Populus trichocarpa] gi|222855176|gb|EEE92723.1|
            predicted protein [Populus trichocarpa]
          Length = 1122

 Score =  228 bits (580), Expect = 2e-57
 Identities = 120/203 (59%), Positives = 133/203 (65%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10   KGKGSNR-CGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVP 186
            +GKGS R CGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVERVFVPPKPKIYC V 
Sbjct: 928  RGKGSGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYCKVS 987

Query: 187  XXXXXXXXXXXTEPFAEDAXXXXXXXXXXXXXSVAQFKITEVHVAGLKTEPGKKKLWGTS 366
                       +E   +                + Q++ITEVHVAG+K+EPGKKKLWGT+
Sbjct: 988  ELRNNDEEDDESESVVKQEVEKQTSEKALEEEGIPQYQITEVHVAGMKSEPGKKKLWGTT 1047

Query: 367  KQQQSGSRWLAATGMGKSNKHPFMKXXXXXXXXXXXXXXXXXXXXPGETLWSISSRVHGT 546
             QQQSGSRWL A GMGK NKH   K                     G++LWS+SSR HGT
Sbjct: 1048 SQQQSGSRWLLANGMGKGNKHSTTKSKGVSTKSAPPLTTKVQR---GDSLWSVSSRFHGT 1104

Query: 547  GAKWKELAALNPHIRNPNVIFPN 615
            GAKWKE     PH RNPNVIFPN
Sbjct: 1105 GAKWKE-----PHKRNPNVIFPN 1122


>ref|XP_003547491.1| PREDICTED: uncharacterized protein LOC100815106 [Glycine max]
          Length = 1174

 Score =  213 bits (541), Expect = 8e-53
 Identities = 122/208 (58%), Positives = 134/208 (64%), Gaps = 3/208 (1%)
 Frame = +1

Query: 1    EKRKGKGSNRCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCT 180
            EKR+GK S RCGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVER F+ PK +I+ +
Sbjct: 971  EKRRGK-SRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQRIFDS 1029

Query: 181  VPXXXXXXXXXXXTEPFA--EDAXXXXXXXXXXXXXSVAQFKITEVHVAGLKTEPGKKKL 354
            V            +E  A  E                + QF+ITEVHVAGLK EP KKKL
Sbjct: 1030 VSEIRKNYDEDDESEIVAKVEMKDTEKEEKSSEEDEGIPQFRITEVHVAGLKPEPQKKKL 1089

Query: 355  WGTSKQQQSGSRWLAATGMGKS-NKHPFMKXXXXXXXXXXXXXXXXXXXXPGETLWSISS 531
            WGTS QQQSGSRWL A GMGKS NK   MK                     G++LWSISS
Sbjct: 1090 WGTSSQQQSGSRWLLANGMGKSNNKLSLMKSKAASKSNAPVTTKGQPG---GDSLWSISS 1146

Query: 532  RVHGTGAKWKELAALNPHIRNPNVIFPN 615
            R+ G   KWKELAALNPHIRNPNVI PN
Sbjct: 1147 RIDGARGKWKELAALNPHIRNPNVIIPN 1174


>gb|AFW83741.1| hypothetical protein ZEAMMB73_439096 [Zea mays]
          Length = 1148

 Score =  212 bits (539), Expect = 1e-52
 Identities = 117/208 (56%), Positives = 126/208 (60%), Gaps = 3/208 (1%)
 Frame = +1

Query: 7    RKGKGSNRCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVP 186
            RK + S R GLLGNNFTVALMVQLR+PLRNYEPVGTPM ALIQVERVFVPPKPKIY TV 
Sbjct: 946  RKSRRSGRWGLLGNNFTVALMVQLRDPLRNYEPVGTPMFALIQVERVFVPPKPKIYSTV- 1004

Query: 187  XXXXXXXXXXXTEPFAE---DAXXXXXXXXXXXXXSVAQFKITEVHVAGLKTEPGKKKLW 357
                        EP AE   D               V QFK+TEVHVAG K+EP K K W
Sbjct: 1005 -SDKGNSEQDDEEPKAEEVPDKALVTEEKAEELEDPVPQFKVTEVHVAGFKSEPEKTKPW 1063

Query: 358  GTSKQQQSGSRWLAATGMGKSNKHPFMKXXXXXXXXXXXXXXXXXXXXPGETLWSISSRV 537
            G   QQQSGSRWL A GMGK NKHP MK                     G+TLWSISSRV
Sbjct: 1064 GNQTQQQSGSRWLLAAGMGKGNKHPLMK------SKAVVKPTKEAAGQAGDTLWSISSRV 1117

Query: 538  HGTGAKWKELAALNPHIRNPNVIFPNEK 621
            HG G +W ELA    H RNPN++   +K
Sbjct: 1118 HGAGTRWSELAGNKSHSRNPNIMLQKDK 1145


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