BLASTX nr result

ID: Coptis21_contig00003421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003421
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322146.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
gb|ABF48494.1| putative GDP-mannose pyrophosphorylase [Linum usi...   100   2e-19
ref|XP_003634297.1| PREDICTED: mannose-1-phosphate guanyltransfe...    99   5e-19
ref|XP_002283703.1| PREDICTED: mannose-1-phosphate guanyltransfe...    99   5e-19
ref|XP_003633817.1| PREDICTED: mannose-1-phosphate guanyltransfe...    98   8e-19

>ref|XP_002322146.1| predicted protein [Populus trichocarpa] gi|222869142|gb|EEF06273.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/55 (87%), Positives = 55/55 (100%)
 Frame = -2

Query: 278 IGKWSRVQAEGNYNAKLGITILGEAVTVEDEVVVINSIILPNKTLNISVQDEIIL 114
           IG+WSRVQAEG+YNAKLG+TILGEAVTVEDEVVV+NSI+LPNKTLN+SVQ+EIIL
Sbjct: 361 IGRWSRVQAEGDYNAKLGVTILGEAVTVEDEVVVVNSIVLPNKTLNVSVQEEIIL 415


>gb|ABF48494.1| putative GDP-mannose pyrophosphorylase [Linum usitatissimum]
          Length = 415

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = -2

Query: 278 IGKWSRVQAEGNYNAKLGITILGEAVTVEDEVVVINSIILPNKTLNISVQDEIIL 114
           IGKWSRVQAEG YNAKLG+TILGEAVTVEDEVVV+NSI+LP+KTLN+SVQ+EIIL
Sbjct: 361 IGKWSRVQAEGVYNAKLGVTILGEAVTVEDEVVVVNSIVLPHKTLNVSVQEEIIL 415


>ref|XP_003634297.1| PREDICTED: mannose-1-phosphate guanyltransferase alpha isoform 2
           [Vitis vinifera]
          Length = 409

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = -2

Query: 278 IGKWSRVQAEGNYNAKLGITILGEAVTVEDEVVVINSIILPNKTLNISVQDEIIL 114
           +GKWSRVQA G+YNAKLGITILGEAV VEDEVVV+NSI+LPNKTLN+SVQ+EIIL
Sbjct: 355 VGKWSRVQAGGDYNAKLGITILGEAVAVEDEVVVVNSIVLPNKTLNVSVQEEIIL 409


>ref|XP_002283703.1| PREDICTED: mannose-1-phosphate guanyltransferase alpha isoform 1
           [Vitis vinifera] gi|297733847|emb|CBI15094.3| unnamed
           protein product [Vitis vinifera]
          Length = 415

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = -2

Query: 278 IGKWSRVQAEGNYNAKLGITILGEAVTVEDEVVVINSIILPNKTLNISVQDEIIL 114
           +GKWSRVQA G+YNAKLGITILGEAV VEDEVVV+NSI+LPNKTLN+SVQ+EIIL
Sbjct: 361 VGKWSRVQAGGDYNAKLGITILGEAVAVEDEVVVVNSIVLPNKTLNVSVQEEIIL 415


>ref|XP_003633817.1| PREDICTED: mannose-1-phosphate guanyltransferase alpha-like isoform
           2 [Vitis vinifera]
          Length = 409

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/55 (87%), Positives = 53/55 (96%)
 Frame = -2

Query: 278 IGKWSRVQAEGNYNAKLGITILGEAVTVEDEVVVINSIILPNKTLNISVQDEIIL 114
           IGKWSRVQAEG+YNAKLGI I+GE+VTVEDEVVVINSI+LPNKTLN SVQ+EIIL
Sbjct: 355 IGKWSRVQAEGDYNAKLGIAIIGESVTVEDEVVVINSIVLPNKTLNDSVQEEIIL 409


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