BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003410
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia ...   509   e-142
gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]       509   e-142
gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [...   508   e-142
dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       507   e-141
gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]    506   e-141

>gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
          Length = 265

 Score =  509 bits (1310), Expect = e-142
 Identities = 243/265 (91%), Positives = 254/265 (95%), Gaps = 1/265 (0%)
 Frame = +3

Query: 63  MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSTPQSIWYGPDRPKYLGP 239
           MATS +QQSAFAGQ ALKPQNELVRKVG+FGG   +MRRTVKS P+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPQNELVRKVGSFGGGHITMRRTVKSAPESIWYGPDRPKYLGP 60

Query: 240 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 419
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 420 NGIKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 599
           NG+KFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMGFVEGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGP 180

Query: 600 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 779
           LG GLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 780 NLYDHLADPTVNNAWAYATNFVPGK 854
           NLYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265


>gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
          Length = 265

 Score =  509 bits (1310), Expect = e-142
 Identities = 241/265 (90%), Positives = 254/265 (95%), Gaps = 1/265 (0%)
 Frame = +3

Query: 63  MATSVVQQSAFAGQIALKPQNELVRKVGTF-GGRFSMRRTVKSTPQSIWYGPDRPKYLGP 239
           MATS +QQSAFAG  ALKPQNELV+K G+F GGRF+MRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGSAALKPQNELVKKTGSFTGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 240 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 419
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLSK 120

Query: 420 NGIKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 599
           NG+KFGEAVWFKAGSQIF+EGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 180

Query: 600 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 779
           LGEGLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 780 NLYDHLADPTVNNAWAYATNFVPGK 854
           NL+DHL+DP  NNAWAYATNFVPGK
Sbjct: 241 NLFDHLSDPVANNAWAYATNFVPGK 265


>gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
           longiflorum]
          Length = 264

 Score =  508 bits (1308), Expect = e-142
 Identities = 242/264 (91%), Positives = 252/264 (95%)
 Frame = +3

Query: 63  MATSVVQQSAFAGQIALKPQNELVRKVGTFGGRFSMRRTVKSTPQSIWYGPDRPKYLGPF 242
           MATS +QQSAF GQ ALK ++ELVRKVG  GGR SMRRTVKS PQSIWYG DRPKYLGPF
Sbjct: 1   MATSAIQQSAFTGQTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPF 60

Query: 243 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKN 422
           SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKN
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKN 120

Query: 423 GIKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGPL 602
           G+KFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWAVQVVLMGF+EGYRIGGGPL
Sbjct: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPL 180

Query: 603 GEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 782
           GEGLD LYPGG+FDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 181 GEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVEN 240

Query: 783 LYDHLADPTVNNAWAYATNFVPGK 854
           LYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 LYDHLADPATNNAWAYATNFVPGK 264


>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  507 bits (1306), Expect = e-141
 Identities = 240/265 (90%), Positives = 255/265 (96%), Gaps = 1/265 (0%)
 Frame = +3

Query: 63  MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSTPQSIWYGPDRPKYLGP 239
           MATS +Q+SAFAGQ ALKPQNELVRK+G+ GG R +MRRTV+S P+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGP 60

Query: 240 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 419
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAR 120

Query: 420 NGIKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 599
           NG+KFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMGFVEGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGP 180

Query: 600 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 779
           LGEGLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 780 NLYDHLADPTVNNAWAYATNFVPGK 854
           NLYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265


>gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]
          Length = 265

 Score =  506 bits (1303), Expect = e-141
 Identities = 242/265 (91%), Positives = 253/265 (95%), Gaps = 1/265 (0%)
 Frame = +3

Query: 63  MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSTPQSIWYGPDRPKYLGP 239
           MATS +Q SAFAGQ  LK QNELVRKVG+FG  R +MRRTVKSTPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQHSAFAGQTVLKQQNELVRKVGSFGSSRTTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 240 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 419
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 420 NGIKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 599
           NG+KFGEAVWFKAGSQIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMG +EGYRIGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRIGGGP 180

Query: 600 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 779
           LGEGLD+LYPGG+FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGEGLDSLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 240

Query: 780 NLYDHLADPTVNNAWAYATNFVPGK 854
           NLYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265