BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003398
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis...   832   0.0  
emb|CBI35093.3| unnamed protein product [Vitis vinifera]              832   0.0  
emb|CBI35079.3| unnamed protein product [Vitis vinifera]              832   0.0  
ref|XP_002263874.1| PREDICTED: THO complex subunit 1-like [Vitis...   832   0.0  
ref|XP_002529986.1| nuclear matrix protein, putative [Ricinus co...   811   0.0  

>ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis vinifera]
          Length = 601

 Score =  832 bits (2149), Expect = 0.0
 Identities = 405/501 (80%), Positives = 447/501 (89%)
 Frame = -1

Query: 1505 QDAIKPQRQTVLVQDENQSLENALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIP 1326
            Q+AIKPQ+QT L QDENQ LEN LR LLQELVS AVQSGE+IMQYG+SIDD E+   QIP
Sbjct: 23   QEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSGEKIMQYGQSIDDEEAIQSQIP 82

Query: 1325 RLLDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGK 1146
            RLLDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGK
Sbjct: 83   RLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGK 142

Query: 1145 LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDA 966
            LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKDA
Sbjct: 143  LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDA 202

Query: 965  PAGISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKA 786
            P GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G A
Sbjct: 203  PEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNA 262

Query: 785  NNLEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSES 606
            NNL EEE+A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+S
Sbjct: 263  NNL-EEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDS 321

Query: 605  MKEEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKT 426
            MKEEIKSCEERVKKLLE+ PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK 
Sbjct: 322  MKEEIKSCEERVKKLLEMTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKA 381

Query: 425  GPDNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAG 246
              D  +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQR RTP++++YWKPLAEDMD SAG
Sbjct: 382  VQDGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRARTPAVSEYWKPLAEDMDLSAG 441

Query: 245  IEAEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSD 66
            IEAEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG          VRSKY  KPSD
Sbjct: 442  IEAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSD 501

Query: 65   KSKRAKKEEETKESVSHAEDN 3
            +SKRAKK EETK +   AE+N
Sbjct: 502  RSKRAKK-EETKGAAQQAEEN 521


>emb|CBI35093.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  832 bits (2149), Expect = 0.0
 Identities = 405/501 (80%), Positives = 446/501 (89%)
 Frame = -1

Query: 1505 QDAIKPQRQTVLVQDENQSLENALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIP 1326
            Q+AIKPQ+QT L QDENQ LEN LR LLQELVS AVQSGE+IM YG+SIDD E+   QIP
Sbjct: 35   QEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSGEKIMHYGQSIDDEEAIQSQIP 94

Query: 1325 RLLDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGK 1146
            RLLDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGK
Sbjct: 95   RLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGK 154

Query: 1145 LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDA 966
            LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKDA
Sbjct: 155  LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDA 214

Query: 965  PAGISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKA 786
            P GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G A
Sbjct: 215  PEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNA 274

Query: 785  NNLEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSES 606
            NNLEEE +A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+S
Sbjct: 275  NNLEEE-AATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDS 333

Query: 605  MKEEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKT 426
            MKEEIKSCEERVKKLLE  PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK 
Sbjct: 334  MKEEIKSCEERVKKLLETTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKA 393

Query: 425  GPDNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAG 246
              D  +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQRVRTP++++YWKPLAEDMD SAG
Sbjct: 394  VQDGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRVRTPAVSEYWKPLAEDMDSSAG 453

Query: 245  IEAEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSD 66
            IEAEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG          VRSKY  KPSD
Sbjct: 454  IEAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSD 513

Query: 65   KSKRAKKEEETKESVSHAEDN 3
            +SKRAKK EETK +   AE+N
Sbjct: 514  RSKRAKK-EETKGAAQQAEEN 533


>emb|CBI35079.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  832 bits (2149), Expect = 0.0
 Identities = 405/501 (80%), Positives = 447/501 (89%)
 Frame = -1

Query: 1505 QDAIKPQRQTVLVQDENQSLENALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIP 1326
            Q+AIKPQ+QT L QDENQ LEN LR LLQELVS AVQSGE+IMQYG+SIDD E+   QIP
Sbjct: 35   QEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSGEKIMQYGQSIDDEEAIQSQIP 94

Query: 1325 RLLDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGK 1146
            RLLDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGK
Sbjct: 95   RLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGK 154

Query: 1145 LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDA 966
            LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKDA
Sbjct: 155  LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDA 214

Query: 965  PAGISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKA 786
            P GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G A
Sbjct: 215  PEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNA 274

Query: 785  NNLEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSES 606
            NNL EEE+A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+S
Sbjct: 275  NNL-EEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDS 333

Query: 605  MKEEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKT 426
            MKEEIKSCEERVKKLLE+ PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK 
Sbjct: 334  MKEEIKSCEERVKKLLEMTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKA 393

Query: 425  GPDNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAG 246
              D  +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQR RTP++++YWKPLAEDMD SAG
Sbjct: 394  VQDGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRARTPAVSEYWKPLAEDMDLSAG 453

Query: 245  IEAEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSD 66
            IEAEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG          VRSKY  KPSD
Sbjct: 454  IEAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSD 513

Query: 65   KSKRAKKEEETKESVSHAEDN 3
            +SKRAKK EETK +   AE+N
Sbjct: 514  RSKRAKK-EETKGAAQQAEEN 533


>ref|XP_002263874.1| PREDICTED: THO complex subunit 1-like [Vitis vinifera]
          Length = 607

 Score =  832 bits (2149), Expect = 0.0
 Identities = 405/501 (80%), Positives = 446/501 (89%)
 Frame = -1

Query: 1505 QDAIKPQRQTVLVQDENQSLENALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIP 1326
            Q+AIKPQ+QT L QDENQ LEN LR LLQELVS AVQSGE+IM YG+SIDD E+   QIP
Sbjct: 29   QEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSGEKIMHYGQSIDDEEAIQSQIP 88

Query: 1325 RLLDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGK 1146
            RLLDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGK
Sbjct: 89   RLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGK 148

Query: 1145 LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDA 966
            LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKDA
Sbjct: 149  LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDA 208

Query: 965  PAGISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKA 786
            P GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G A
Sbjct: 209  PEGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNA 268

Query: 785  NNLEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSES 606
            NNLEEE +A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+S
Sbjct: 269  NNLEEE-AATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDS 327

Query: 605  MKEEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKT 426
            MKEEIKSCEERVKKLLE  PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK 
Sbjct: 328  MKEEIKSCEERVKKLLETTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKA 387

Query: 425  GPDNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAG 246
              D  +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQRVRTP++++YWKPLAEDMD SAG
Sbjct: 388  VQDGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRVRTPAVSEYWKPLAEDMDSSAG 447

Query: 245  IEAEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSD 66
            IEAEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG          VRSKY  KPSD
Sbjct: 448  IEAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSD 507

Query: 65   KSKRAKKEEETKESVSHAEDN 3
            +SKRAKK EETK +   AE+N
Sbjct: 508  RSKRAKK-EETKGAAQQAEEN 527


>ref|XP_002529986.1| nuclear matrix protein, putative [Ricinus communis]
            gi|223530509|gb|EEF32391.1| nuclear matrix protein,
            putative [Ricinus communis]
          Length = 608

 Score =  811 bits (2096), Expect = 0.0
 Identities = 395/501 (78%), Positives = 441/501 (88%)
 Frame = -1

Query: 1505 QDAIKPQRQTVLVQDENQSLENALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIP 1326
            Q+ IKPQRQT L QDENQ LEN LRTLLQELV+SAV SGEQIM YG+S+D+ E + GQIP
Sbjct: 23   QEFIKPQRQTKLAQDENQLLENMLRTLLQELVASAVHSGEQIMLYGQSVDEGEKSQGQIP 82

Query: 1325 RLLDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGK 1146
            RLLD+VL+LCE+ HVEGGMIFQLLEDLTEMSTM++C+++FGYIESKQDILGKQELF RGK
Sbjct: 83   RLLDVVLHLCEREHVEGGMIFQLLEDLTEMSTMKNCQDIFGYIESKQDILGKQELFARGK 142

Query: 1145 LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDA 966
            LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKD 
Sbjct: 143  LVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDP 202

Query: 965  PAGISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKA 786
            PAGIS+DFNFYKT WSLQE+F NPA  T+A TKWHKF+S+L V+L+TFEAQPLS+++G A
Sbjct: 203  PAGISVDFNFYKTLWSLQENFCNPAPLTLAPTKWHKFTSSLMVVLNTFEAQPLSEEEGDA 262

Query: 785  NNLEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSES 606
            NNLEEE +A FNIKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD  SES
Sbjct: 263  NNLEEE-AATFNIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDSTSES 321

Query: 605  MKEEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKT 426
            MKE+I++CEERVKKLLE+ PP GKDFL  IEH+LERE+NWV WKRDGC PFEKQP E KT
Sbjct: 322  MKEDIRTCEERVKKLLEMTPPKGKDFLQKIEHVLEREKNWVCWKRDGCQPFEKQPIENKT 381

Query: 425  GPDNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAG 246
              +  +KRKPRWRLGNKEL QLWKWADQ+PNALTDPQRVRTP+IT+YWKPLAEDMD SAG
Sbjct: 382  IQEGSKKRKPRWRLGNKELSQLWKWADQNPNALTDPQRVRTPAITEYWKPLAEDMDPSAG 441

Query: 245  IEAEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSD 66
            IEAEYHHKNN+VYCWKGLRFS+RQDL+GFSRF DHGIEG          VRSKY  KP+D
Sbjct: 442  IEAEYHHKNNRVYCWKGLRFSARQDLDGFSRFTDHGIEGVVPLELLPPDVRSKYQAKPND 501

Query: 65   KSKRAKKEEETKESVSHAEDN 3
            +SKRAKK ++ K   +  E+N
Sbjct: 502  RSKRAKK-DDIKGGSNQTEEN 521