BLASTX nr result

ID: Coptis21_contig00003361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003361
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_849818.1| elongation factor EF-2 [Arabidopsis thaliana] g...   178   5e-43
ref|XP_002894554.1| hypothetical protein ARALYDRAFT_892631 [Arab...   178   5e-43
dbj|BAD94268.1| hypothetical protein [Arabidopsis thaliana]           178   5e-43
gb|AAP04170.1| putative elongation factor [Arabidopsis thaliana]...   178   5e-43
gb|AAF02837.1|AC009894_8 elongation factor EF-2 [Arabidopsis tha...   178   5e-43

>ref|NP_849818.1| elongation factor EF-2 [Arabidopsis thaliana]
           gi|13605865|gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13
           [Arabidopsis thaliana] gi|15450763|gb|AAK96653.1|
           elongation factor EF-2 [Arabidopsis thaliana]
           gi|23397045|gb|AAN31808.1| putative elongation factor
           [Arabidopsis thaliana] gi|23397162|gb|AAN31864.1|
           putative elongation factor [Arabidopsis thaliana]
           gi|27363422|gb|AAO11630.1| At1g56070/T6H22_13
           [Arabidopsis thaliana] gi|332195217|gb|AEE33338.1|
           elongation factor EF-2 [Arabidopsis thaliana]
          Length = 843

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/95 (91%), Positives = 94/95 (98%)
 Frame = -1

Query: 285 GQKKDLYTKSVQRTVIWMGKRQESVEDVPCGNTVALVGLDRFITKNATLTNEEEVEAHPI 106
           G+KKDLYTKSVQRTVIWMGKRQE+VEDVPCGNTVA+VGLD+FITKNATLTNE+EV+AHPI
Sbjct: 419 GEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPI 478

Query: 105 CAMKFSVSPIVRVAVQCKVASDLPKLVEGLKRLAK 1
            AMKFSVSP+VRVAVQCKVASDLPKLVEGLKRLAK
Sbjct: 479 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 513


>ref|XP_002894554.1| hypothetical protein ARALYDRAFT_892631 [Arabidopsis lyrata subsp.
           lyrata] gi|297340396|gb|EFH70813.1| hypothetical protein
           ARALYDRAFT_892631 [Arabidopsis lyrata subsp. lyrata]
          Length = 843

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/95 (91%), Positives = 94/95 (98%)
 Frame = -1

Query: 285 GQKKDLYTKSVQRTVIWMGKRQESVEDVPCGNTVALVGLDRFITKNATLTNEEEVEAHPI 106
           G+KKDLYTKSVQRTVIWMGKRQE+VEDVPCGNTVA+VGLD+FITKNATLTNE+EV+AHPI
Sbjct: 419 GEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPI 478

Query: 105 CAMKFSVSPIVRVAVQCKVASDLPKLVEGLKRLAK 1
            AMKFSVSP+VRVAVQCKVASDLPKLVEGLKRLAK
Sbjct: 479 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 513


>dbj|BAD94268.1| hypothetical protein [Arabidopsis thaliana]
          Length = 539

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/95 (91%), Positives = 94/95 (98%)
 Frame = -1

Query: 285 GQKKDLYTKSVQRTVIWMGKRQESVEDVPCGNTVALVGLDRFITKNATLTNEEEVEAHPI 106
           G+KKDLYTKSVQRTVIWMGKRQE+VEDVPCGNTVA+VGLD+FITKNATLTNE+EV+AHPI
Sbjct: 115 GEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPI 174

Query: 105 CAMKFSVSPIVRVAVQCKVASDLPKLVEGLKRLAK 1
            AMKFSVSP+VRVAVQCKVASDLPKLVEGLKRLAK
Sbjct: 175 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 209


>gb|AAP04170.1| putative elongation factor [Arabidopsis thaliana]
           gi|29893543|gb|AAK59516.2| putative elongation factor
           [Arabidopsis thaliana]
          Length = 663

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/95 (91%), Positives = 94/95 (98%)
 Frame = -1

Query: 285 GQKKDLYTKSVQRTVIWMGKRQESVEDVPCGNTVALVGLDRFITKNATLTNEEEVEAHPI 106
           G+KKDLYTKSVQRTVIWMGKRQE+VEDVPCGNTVA+VGLD+FITKNATLTNE+EV+AHPI
Sbjct: 239 GEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPI 298

Query: 105 CAMKFSVSPIVRVAVQCKVASDLPKLVEGLKRLAK 1
            AMKFSVSP+VRVAVQCKVASDLPKLVEGLKRLAK
Sbjct: 299 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 333


>gb|AAF02837.1|AC009894_8 elongation factor EF-2 [Arabidopsis thaliana]
          Length = 846

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/95 (91%), Positives = 94/95 (98%)
 Frame = -1

Query: 285 GQKKDLYTKSVQRTVIWMGKRQESVEDVPCGNTVALVGLDRFITKNATLTNEEEVEAHPI 106
           G+KKDLYTKSVQRTVIWMGKRQE+VEDVPCGNTVA+VGLD+FITKNATLTNE+EV+AHPI
Sbjct: 422 GEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPI 481

Query: 105 CAMKFSVSPIVRVAVQCKVASDLPKLVEGLKRLAK 1
            AMKFSVSP+VRVAVQCKVASDLPKLVEGLKRLAK
Sbjct: 482 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 516


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