BLASTX nr result

ID: Coptis21_contig00003331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003331
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34172.1| unknown [Lotus japonicus]                              173   9e-41
ref|XP_003625448.1| TPR domain protein [Medicago truncatula] gi|...   173   9e-41
gb|AFK41227.1| unknown [Medicago truncatula]                          172   3e-40
ref|XP_002301849.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-40
ref|XP_003625375.1| TPR domain protein [Medicago truncatula] gi|...   172   3e-40

>gb|AFK34172.1| unknown [Lotus japonicus]
          Length = 167

 Score =  173 bits (439), Expect = 9e-41
 Identities = 81/106 (76%), Positives = 91/106 (85%)
 Frame = +1

Query: 913  GGGDRDNSSMEEYYKEMVEENPGNALFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGDG 1092
            GG D D   +EEYYK+MVEE+PG+ LFLRNYAQFLYQ K DL+ AEEYYSRAIL+DP DG
Sbjct: 36   GGNDGDMHGVEEYYKKMVEESPGDPLFLRNYAQFLYQCKHDLKGAEEYYSRAILADPKDG 95

Query: 1093 EMLSQYAKIVWELHRDHERASSYFERAVQVAPQDSHVHAAYASFLW 1230
            E+LSQY K+VWELH D ERASSYFERA Q +P+DSHVHAAYASFLW
Sbjct: 96   EVLSQYGKLVWELHHDEERASSYFERAAQASPEDSHVHAAYASFLW 141


>ref|XP_003625448.1| TPR domain protein [Medicago truncatula] gi|355500463|gb|AES81666.1|
            TPR domain protein [Medicago truncatula]
          Length = 363

 Score =  173 bits (439), Expect = 9e-41
 Identities = 80/108 (74%), Positives = 92/108 (85%)
 Frame = +1

Query: 907  EIGGGDRDNSSMEEYYKEMVEENPGNALFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPG 1086
            E   GD +N  +E+YYK+MV++NPGN LFLRNYAQFLYQ K DL+ AEEYYSRAIL+DP 
Sbjct: 226  ERNDGDNNNHGVEQYYKKMVQQNPGNPLFLRNYAQFLYQCKQDLEGAEEYYSRAILADPN 285

Query: 1087 DGEMLSQYAKIVWELHRDHERASSYFERAVQVAPQDSHVHAAYASFLW 1230
            DGE+LSQY K+VWELH D ERASSYFERAVQ +P+DSHV AAYASFLW
Sbjct: 286  DGEVLSQYGKLVWELHHDEERASSYFERAVQASPEDSHVQAAYASFLW 333


>gb|AFK41227.1| unknown [Medicago truncatula]
          Length = 141

 Score =  172 bits (435), Expect = 3e-40
 Identities = 82/107 (76%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
 Frame = +1

Query: 913  GGGDRD-NSSMEEYYKEMVEENPGNALFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGD 1089
            GG D D N  +EEYYK+MV++NPGN LFLRNYAQFLYQ K D + AEEYYSRAIL+DP D
Sbjct: 4    GGNDGDSNHGVEEYYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPND 63

Query: 1090 GEMLSQYAKIVWELHRDHERASSYFERAVQVAPQDSHVHAAYASFLW 1230
            GE+LSQY K+VWELHRD ERASSYFERAVQ +P DSHV AAYASFLW
Sbjct: 64   GEVLSQYGKLVWELHRDEERASSYFERAVQASPDDSHVQAAYASFLW 110


>ref|XP_002301849.1| predicted protein [Populus trichocarpa] gi|222843575|gb|EEE81122.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  172 bits (435), Expect = 3e-40
 Identities = 81/106 (76%), Positives = 92/106 (86%)
 Frame = +1

Query: 913  GGGDRDNSSMEEYYKEMVEENPGNALFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGDG 1092
            GGGD   +  EEYYK+MV+ENPGN LFLRNYAQFLYQ+K DLQ AEEYYSRAIL+DP DG
Sbjct: 248  GGGDMHGT--EEYYKKMVQENPGNPLFLRNYAQFLYQTKRDLQGAEEYYSRAILADPKDG 305

Query: 1093 EMLSQYAKIVWELHRDHERASSYFERAVQVAPQDSHVHAAYASFLW 1230
            E+LSQY K+VWELH+D +RASSYFER VQ +P+D HVHAAYASFLW
Sbjct: 306  EILSQYGKLVWELHQDQDRASSYFERGVQASPEDCHVHAAYASFLW 351



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
 Frame = +1

Query: 181 MLLRSSSTPILGSVLSSLSETPNRDFDATNNNINKPSLSNSGHKRLSFLHGGAHXXXXXX 360
           MLLRSSSTP+LGS+LSS S++PN      +++IN P+  +S     S      H      
Sbjct: 1   MLLRSSSTPVLGSLLSSFSDSPNNSSSNHHHDIN-PTFKHSPIHHQSINKLPYHQTGCFC 59

Query: 361 XXXXXXLNG-FSDIDQETNTGSLGGLRRAQSAGNLQGLMDM-----DEFHTSNKPSLRSS 522
                  +   S    E +  S  G RRAQS GNLQGL+D      D  H +   + + S
Sbjct: 60  LSTISCNSSPISPSISEFSGRSHQGFRRAQSEGNLQGLLDYSSNNNDAQHYNPNQTRKVS 119

Query: 523 RKPHHSVLQTIPSFS 567
            +    +L+TIPSFS
Sbjct: 120 GRSKCLMLETIPSFS 134


>ref|XP_003625375.1| TPR domain protein [Medicago truncatula] gi|355500390|gb|AES81593.1|
            TPR domain protein [Medicago truncatula]
          Length = 353

 Score =  172 bits (435), Expect = 3e-40
 Identities = 82/107 (76%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
 Frame = +1

Query: 913  GGGDRD-NSSMEEYYKEMVEENPGNALFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGD 1089
            GG D D N  +EEYYK+MV++NPGN LFLRNYAQFLYQ K D + AEEYYSRAIL+DP D
Sbjct: 216  GGNDGDSNHGVEEYYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPND 275

Query: 1090 GEMLSQYAKIVWELHRDHERASSYFERAVQVAPQDSHVHAAYASFLW 1230
            GE+LSQY K+VWELHRD ERASSYFERAVQ +P DSHV AAYASFLW
Sbjct: 276  GEVLSQYGKLVWELHRDEERASSYFERAVQASPDDSHVQAAYASFLW 322


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