BLASTX nr result

ID: Coptis21_contig00003329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003329
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|2...   186   5e-45
ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211...   183   4e-44
ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245...   179   8e-43
ref|XP_002532737.1| protein translocase, putative [Ricinus commu...   172   9e-41
ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycin...   169   6e-40

>ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|222844784|gb|EEE82331.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  186 bits (472), Expect = 5e-45
 Identities = 92/171 (53%), Positives = 117/171 (68%)
 Frame = -2

Query: 720 SWKERVFVPTXXXXXXXXXXXLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 541
           +WKER+ +PT           L+SKHRK HG+A++S TYATN SIVTGCYCGAREF+R  
Sbjct: 27  NWKERILIPTLLAGITGGGVGLVSKHRKVHGLANISTTYATNFSIVTGCYCGAREFVRVV 86

Query: 540 RASGPDDLLNSAIGGFASXXXXXXXXXXXXXAIKYSVIFAIVGTTVDFAALQLTSHIQKY 361
           R S PDDL+NSA+ GF S             A +YSVIFA+VGTTVDFA ++L   +  +
Sbjct: 87  RKSEPDDLVNSAVAGFGSGALLGRLQGGQFGAFRYSVIFAVVGTTVDFATIKLRPALSNF 146

Query: 360 RESMDGENKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQTTIG 208
           +ES+    K  E+K  W +LPEWSPIQVLDEEAL AK ARE++L A++ +G
Sbjct: 147 KESI---FKEKEKKPGWLKLPEWSPIQVLDEEALAAKEAREKELYARSALG 194


>ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211202 [Cucumis sativus]
           gi|449529275|ref|XP_004171626.1| PREDICTED:
           uncharacterized protein LOC101232073 [Cucumis sativus]
          Length = 197

 Score =  183 bits (464), Expect = 4e-44
 Identities = 94/177 (53%), Positives = 119/177 (67%)
 Frame = -2

Query: 738 TSLKRWSWKERVFVPTXXXXXXXXXXXLISKHRKTHGVAHMSATYATNLSIVTGCYCGAR 559
           TS     WKER+F PT           L+SK+RK HG+A++SATYATNLSIV  CYCGAR
Sbjct: 20  TSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANISATYATNLSIVAACYCGAR 79

Query: 558 EFIRATRASGPDDLLNSAIGGFASXXXXXXXXXXXXXAIKYSVIFAIVGTTVDFAALQLT 379
           EF+R +R S PDDL+NSAI GF +             +++YS++F IVGTTVD+A L+L 
Sbjct: 80  EFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLMFTIVGTTVDYATLKLK 139

Query: 378 SHIQKYRESMDGENKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQTTIG 208
             ++ Y+ES+       E  +SW +LPEWSPIQVLDEEAL AK+AREQQL AQ  +G
Sbjct: 140 PTLRSYKESI------IEGSSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALG 190


>ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245423 [Vitis vinifera]
           gi|296085621|emb|CBI29410.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  179 bits (453), Expect = 8e-43
 Identities = 90/178 (50%), Positives = 119/178 (66%)
 Frame = -2

Query: 741 DTSLKRWSWKERVFVPTXXXXXXXXXXXLISKHRKTHGVAHMSATYATNLSIVTGCYCGA 562
           D+S     WKER F+PT           L+SK+RK HG+A++SATYA N +IVTGCYCGA
Sbjct: 15  DSSSSSEFWKERFFIPTLLAGIVGGGTGLVSKYRKVHGLANISATYAANFAIVTGCYCGA 74

Query: 561 REFIRATRASGPDDLLNSAIGGFASXXXXXXXXXXXXXAIKYSVIFAIVGTTVDFAALQL 382
           REF+R  R +GPDDL++SA+GGF S             A++YSV+FA+ GT+VDFA L+L
Sbjct: 75  REFVRRNRGTGPDDLISSAVGGFGSGAILGCLQGGRAGAVRYSVMFAVAGTSVDFAILKL 134

Query: 381 TSHIQKYRESMDGENKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQTTIG 208
               + + ES+      S++   W +LPEWSPIQVLDEEAL AK+AREQ+L  Q ++G
Sbjct: 135 KPVWKNFSESI------SQKSEDWLKLPEWSPIQVLDEEALAAKKAREQKLYGQRSLG 186


>ref|XP_002532737.1| protein translocase, putative [Ricinus communis]
           gi|223527514|gb|EEF29639.1| protein translocase,
           putative [Ricinus communis]
          Length = 203

 Score =  172 bits (435), Expect = 9e-41
 Identities = 84/167 (50%), Positives = 111/167 (66%)
 Frame = -2

Query: 720 SWKERVFVPTXXXXXXXXXXXLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 541
           +WKER+ +PT           L+SKHR+THG+A +S  YATN +IVTGCYCGAREF+R +
Sbjct: 26  NWKERILIPTILAGIGGGGVGLVSKHRQTHGLASISTAYATNFAIVTGCYCGAREFVRVS 85

Query: 540 RASGPDDLLNSAIGGFASXXXXXXXXXXXXXAIKYSVIFAIVGTTVDFAALQLTSHIQKY 361
           R S PDDL+NSA  GF +             A +YS+IFA+VGTTVDFA ++L   ++ +
Sbjct: 86  RKSEPDDLVNSAFAGFGTGALLGRLQGGQFGAFRYSIIFAVVGTTVDFATIKLKPKLRSF 145

Query: 360 RESMDGENKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQ 220
           ++S+ G+    E+K  W +LP W PIQVLDEEAL AK  RE+QL  Q
Sbjct: 146 KQSLYGD---KEKKGGWLKLPVWFPIQVLDEEALAAKEVREKQLYEQ 189


>ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycine max]
           gi|255631151|gb|ACU15941.1| unknown [Glycine max]
          Length = 203

 Score =  169 bits (428), Expect = 6e-40
 Identities = 83/167 (49%), Positives = 113/167 (67%)
 Frame = -2

Query: 720 SWKERVFVPTXXXXXXXXXXXLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 541
           +WK R+ +PT           LISKHR+T G+A + + YA N +IVTGCYCGAREF+ AT
Sbjct: 25  AWKSRIVIPTLLAGVAGAGAGLISKHRRTLGLATVCSNYAVNFTIVTGCYCGAREFVAAT 84

Query: 540 RASGPDDLLNSAIGGFASXXXXXXXXXXXXXAIKYSVIFAIVGTTVDFAALQLTSHIQKY 361
           R +GPDD+LNSA+ GF +             AI+YSV+FA+VGTT DFA L+L   ++ +
Sbjct: 85  RKTGPDDILNSAVAGFGTGALLGRLQGGQLGAIRYSVMFAVVGTTADFAILKLKDALRDH 144

Query: 360 RESMDGENKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQ 220
            +++    +NS++  +W +LPEW PIQVLDEEAL AKRA+E+Q L Q
Sbjct: 145 TKTIYQHIENSKKSGTWLKLPEWFPIQVLDEEALAAKRAQEEQFLQQ 191


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