BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003325
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   254   1e-65
emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   254   1e-65
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   249   4e-64
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   247   1e-63
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   246   3e-63

>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  254 bits (649), Expect = 1e-65
 Identities = 127/168 (75%), Positives = 134/168 (79%), Gaps = 5/168 (2%)
 Frame = -1

Query: 575 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 396
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 395 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 216
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV R   HH +RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 215 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 87
                  EQSI+MVKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  254 bits (649), Expect = 1e-65
 Identities = 127/168 (75%), Positives = 134/168 (79%), Gaps = 5/168 (2%)
 Frame = -1

Query: 575 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 396
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 57  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 116

Query: 395 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 216
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV R   HH +RM G      
Sbjct: 117 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 176

Query: 215 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 87
                  EQSI+MVKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 177 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 224


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  249 bits (635), Expect = 4e-64
 Identities = 123/168 (73%), Positives = 132/168 (78%), Gaps = 5/168 (2%)
 Frame = -1

Query: 575 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 396
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 395 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 216
           KDMTQDSTFEFERKRNRPERYDR++ EN LKAI KIDK+RV R E HHK RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 215 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 87
                  EQ I++VKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  247 bits (631), Expect = 1e-63
 Identities = 121/168 (72%), Positives = 132/168 (78%), Gaps = 5/168 (2%)
 Frame = -1

Query: 575 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 396
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 395 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 216
           KDMTQDSTFEFERKRNRPERYDR++ EN LK I KIDK+RV+R E HHK RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 215 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 87
                  EQ I++VKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  246 bits (628), Expect = 3e-63
 Identities = 123/168 (73%), Positives = 130/168 (77%), Gaps = 5/168 (2%)
 Frame = -1

Query: 575 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 396
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 395 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 216
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV R   HH +RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 215 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 87
                  EQ I+MVKAP  +       LP  K KV + Q +EN  MEE
Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPMEE 168