BLASTX nr result

ID: Coptis21_contig00003321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003321
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis ...   407   e-111
ref|XP_002526027.1| Prolactin regulatory element-binding protein...   397   e-108
ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycin...   374   e-101

>ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis vinifera]
          Length = 394

 Score =  407 bits (1045), Expect = e-111
 Identities = 200/321 (62%), Positives = 247/321 (76%), Gaps = 15/321 (4%)
 Frame = +3

Query: 81  QKYGVPIYGAAWVPTNLLHN------QKQE--------ELDSSELSQCLVLCGGGGEGKS 218
           +KYGVP+YGAAW P+ ++++      QKQE           S      LV CGGGGEG+S
Sbjct: 13  KKYGVPLYGAAWAPSTIINDAPQPLDQKQEADEVSGEGSTPSPAAPTYLVFCGGGGEGRS 72

Query: 219 GIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKTCRWFEWDV 398
           GIPN++LL+ F+  SNSLS  P+ KLG GADLPYRMAVHPGG+G+ICS PK+C+WF+WD 
Sbjct: 73  GIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQWDE 132

Query: 399 PESSETYRLDLKSSEKILTQMEDVGQQLAMTFNADGSALAVGGEDGHLRVFKWPSMEVIL 578
            ++ E ++  LK SEK+LT +EDVGQQLA+TFN DGS LAVGGEDG+LRVFKWPSME +L
Sbjct: 133 IKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLAVGGEDGNLRVFKWPSMENVL 192

Query: 579 DENDAHATVKDLSFSSDEKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGFCRFSQT 758
            E  AHATVKD  FS D K+LVSLGSG   RVWD++SS  +ASLPKENDE+F FCRFSQT
Sbjct: 193 SEAQAHATVKDFDFSPDGKFLVSLGSGGPGRVWDLTSSTAIASLPKENDEVFAFCRFSQT 252

Query: 759 KDNTQILYITAMRGHGGSIIYWDTTSWKRIGSKQVVRDPISAFNVSSDGEFLAVGTIQGD 938
               Q+LYI A+R  G  I+ W+TT+WK++GSKQ+VRD ISAF+VS+DG+ L+VGTIQGD
Sbjct: 253 NVKNQVLYIAAVRDRGACIVTWNTTTWKKVGSKQIVRDSISAFSVSADGKLLSVGTIQGD 312

Query: 939 IYIVNS-SMRVHTVIKKAHLG 998
           I IVNS SM+V  V++KAHLG
Sbjct: 313 IVIVNSASMQVQAVVRKAHLG 333


>ref|XP_002526027.1| Prolactin regulatory element-binding protein, putative [Ricinus
           communis] gi|223534674|gb|EEF36367.1| Prolactin
           regulatory element-binding protein, putative [Ricinus
           communis]
          Length = 390

 Score =  397 bits (1020), Expect = e-108
 Identities = 195/317 (61%), Positives = 245/317 (77%), Gaps = 8/317 (2%)
 Frame = +3

Query: 72  LSTQKYGVPIYGAAWVPTNLLHNQKQE-----ELDSSELSQ--CLVLCGGGGEGKSGIPN 230
           LS QKYGVP Y AAWVP  L+ ++ Q      E D  E++    ++L GGGGEG+SGIPN
Sbjct: 10  LSFQKYGVPFYSAAWVPYKLVRSKLQSSHSDHENDHEEIADQYYVLLAGGGGEGRSGIPN 69

Query: 231 SILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKTCRWFEWDVPESS 410
           +++LS F+ T NSLSP P++KLGTG+DLPYRM VHPGGDG++C+ P +CR+FEWD  + +
Sbjct: 70  ALVLSRFDFTFNSLSPQPVAKLGTGSDLPYRMVVHPGGDGLVCALPNSCRFFEWDEVKDN 129

Query: 411 ETYRLDLKSSEKILTQMEDVGQQLAMTFNADGSALAVGGEDGHLRVFKWPSMEVILDEND 590
           E ++L LK SEK LTQ+EDVGQQLA+ FN++ SALAVGGEDG LRVFKWPSME+ L+E +
Sbjct: 130 EAHKLGLKESEKALTQLEDVGQQLALAFNSESSALAVGGEDGRLRVFKWPSMEIFLNEAE 189

Query: 591 AHATVKDLSFSSDEKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGFCRFSQTKDNT 770
           AH ++KDL FS D K+LVSLG     RVWDV+SS  VASL KENDE+F  CRFSQT D T
Sbjct: 190 AHPSLKDLCFSPDGKFLVSLGGRGPGRVWDVTSSTAVASLSKENDEVFASCRFSQTTDQT 249

Query: 771 QILYITAMRGHGGSIIYWDTTSWKRIGSKQVVRDPISAFNVSSDGEFLAVGTIQGDIYIV 950
           Q+LYI A+   GGSI+ WD +SW RIGSK + RD IS+FNVS DG+FLAVGT QGD+ ++
Sbjct: 250 QVLYIAAITDKGGSIVTWDASSWNRIGSKHITRDGISSFNVSPDGKFLAVGTSQGDVLLL 309

Query: 951 NSS-MRVHTVIKKAHLG 998
           NS+ +RV  V++KAHLG
Sbjct: 310 NSTRVRVQKVVRKAHLG 326


>ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|222852263|gb|EEE89810.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  392 bits (1008), Expect = e-107
 Identities = 187/321 (58%), Positives = 243/321 (75%), Gaps = 15/321 (4%)
 Frame = +3

Query: 81  QKYGVPIYGAAWVPTNLLHN------QKQEELDSSELSQC--------LVLCGGGGEGKS 218
           QKYGVP+Y AAW+P    H       Q +++ D+ E++          ++L GGGGEG+S
Sbjct: 5   QKYGVPLYSAAWLPLQFRHEDHDSSKQHEQDKDTEEITHASASSYEYYVILAGGGGEGRS 64

Query: 219 GIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKTCRWFEWDV 398
           GIPN++LLS F+ +SNSLSP P+ KL  G+DLPYRM VHPGGDG+IC+ P +CR+FEWD 
Sbjct: 65  GIPNAVLLSRFDFSSNSLSPQPVPKLNLGSDLPYRMVVHPGGDGLICALPNSCRFFEWDE 124

Query: 399 PESSETYRLDLKSSEKILTQMEDVGQQLAMTFNADGSALAVGGEDGHLRVFKWPSMEVIL 578
            E +E ++L LKSSEK+LTQ+EDVGQQLA+ FN+D S LAVGGEDG+LRVFKWPSME+I 
Sbjct: 125 VEDNEDHKLGLKSSEKVLTQLEDVGQQLALVFNSDSSVLAVGGEDGNLRVFKWPSMEIIF 184

Query: 579 DENDAHATVKDLSFSSDEKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGFCRFSQT 758
           +E  AHA++KDL FS D K+LVSLG     RVWDV+SS  VASL KENDE+F  CRFSQ 
Sbjct: 185 NEAQAHASLKDLCFSPDGKFLVSLGGRGPGRVWDVTSSMAVASLSKENDEIFASCRFSQI 244

Query: 759 KDNTQILYITAMRGHGGSIIYWDTTSWKRIGSKQVVRDPISAFNVSSDGEFLAVGTIQGD 938
            D TQ+LY+ A+   G SI+ W+ +SWKR+ SK V R+P+S+FN+S DG+FLA+GT QGD
Sbjct: 245 SDQTQVLYVAAITDKGSSIVTWNASSWKRVSSKHVFREPVSSFNISPDGKFLAIGTAQGD 304

Query: 939 IYIVNS-SMRVHTVIKKAHLG 998
           + ++NS +M + T+I+KAHLG
Sbjct: 305 VMLINSTNMCIQTMIRKAHLG 325


>ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|222863844|gb|EEF00975.1|
            predicted protein [Populus trichocarpa]
          Length = 370

 Score =  381 bits (979), Expect = e-103
 Identities = 187/331 (56%), Positives = 244/331 (73%), Gaps = 23/331 (6%)
 Frame = +3

Query: 75   STQKYGVPIYGAAWVPTNLLHNQKQ---EELDSSELSQ-------------------CLV 188
            S QKYGVP+Y AAW+P   L ++ Q   + +DSS+  +                    +V
Sbjct: 11   SLQKYGVPLYSAAWLPYKELRSKLQPRDDHVDSSKQQEQQQEEEEEIPKPSASSHEHYVV 70

Query: 189  LCGGGGEGKSGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFP 368
            L GGGGEG SGIPN++LLS F+ +SNSL+  P++KLG G+ LPYRM VHPGGDGVIC+FP
Sbjct: 71   LAGGGGEGSSGIPNAVLLSCFDFSSNSLASQPVAKLGLGSQLPYRMVVHPGGDGVICAFP 130

Query: 369  KTCRWFEWDVPESSETYRLDLKSSEKILTQMEDVGQQLAMTFNADGSALAVGGEDGHLRV 548
             +CR+F+WD  + +E ++L LK S+K+LTQ+EDVGQQLA+ FN+D S LAVGGEDG+LRV
Sbjct: 131  SSCRFFDWDEVKDNEDHKLGLKPSKKVLTQLEDVGQQLALAFNSDSSVLAVGGEDGNLRV 190

Query: 549  FKWPSMEVILDENDAHATVKDLSFSSDEKYLVSLGSGSSCRVWDVSSSKIVASLPKENDE 728
            FKWP ME+IL+E  AHA++KDL FS D K+LVS+G     RVWDV+SS  VASLPKENDE
Sbjct: 191  FKWPGMEIILNETQAHASLKDLCFSPDGKFLVSMGQRDLGRVWDVTSSTAVASLPKENDE 250

Query: 729  MFGFCRFSQTKDNTQILYITAMRGHGGSIIYWDTTSWKRIGSKQVVRDPISAFNVSSDGE 908
            +F  CRFSQ  D  Q+LYI A+   G SI+ W+T+SWKR+ SK V R+P+S+FNVS DG+
Sbjct: 251  IFASCRFSQRSDQAQVLYIAAITDKGSSIVTWNTSSWKRMSSKHVAREPVSSFNVSPDGK 310

Query: 909  FLAVGTIQGDIYIVNS-SMRVHTVIKKAHLG 998
             LA+G  QGD+ +VNS ++RV T+++KAHLG
Sbjct: 311  LLAMGMTQGDVLLVNSTNLRVQTLVRKAHLG 341


>ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycine max]
          Length = 400

 Score =  374 bits (961), Expect = e-101
 Identities = 184/328 (56%), Positives = 240/328 (73%), Gaps = 22/328 (6%)
 Frame = +3

Query: 81  QKYGVPIYGAAWVPTNLLHNQKQEELDSSELSQ-------------------CLVLCGGG 203
           +KYGVP Y  AW+P +++ +++ E  D S  S                     L+  GGG
Sbjct: 13  KKYGVPFYSVAWIPQHVVKSRQIETADESSDSDHSTSPATEAEKEPATVAGNYLLFAGGG 72

Query: 204 GEGKSGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSF--PKTC 377
           G G SGIPN+++++ F+  SNSLS  P+ KLGT ++LPYRMA++  GDG+IC+   P  C
Sbjct: 73  GAGHSGIPNALVIAHFDVASNSLSDQPVCKLGTDSELPYRMALNSNGDGLICAMETPMVC 132

Query: 378 RWFEWDVPESSETYRLDLKSSEKILTQMEDVGQQLAMTFNADGSALAVGGEDGHLRVFKW 557
           RWF+WD  +SSE ++L LK SEK+L+Q+EDVGQQLA+ FN DG+ALA GGEDG+LRVFKW
Sbjct: 133 RWFDWDQNKSSEIHKLSLKLSEKVLSQLEDVGQQLALAFNNDGTALAAGGEDGNLRVFKW 192

Query: 558 PSMEVILDENDAHATVKDLSFSSDEKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFG 737
           PSME+IL+E +AH+++KDL FSSD K L SLGSG  C+VWDVSSS +++SL  EN E F 
Sbjct: 193 PSMEIILNETNAHSSLKDLHFSSDGKLLASLGSGGPCKVWDVSSSMVLSSLSNENRETFS 252

Query: 738 FCRFSQTKDNTQILYITAMRGHGGSIIYWDTTSWKRIGSKQVVRDPISAFNVSSDGEFLA 917
            CRFSQT D T ILYI AM   GGSI+ W+T +W+R+ SK ++RDPISAFNVS+DG+FLA
Sbjct: 253 SCRFSQTNDETLILYIAAMTDKGGSILTWNTQTWERMASKHIIRDPISAFNVSADGKFLA 312

Query: 918 VGTIQGDIYIVNS-SMRVHTVIKKAHLG 998
            GT  GDI +VNS +M++HT+IKKAHLG
Sbjct: 313 CGTPSGDIVVVNSTNMQIHTMIKKAHLG 340


Top