BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003255
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   521   e-145
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   497   e-138
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   496   e-138
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   496   e-138

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  521 bits (1342), Expect = e-145
 Identities = 255/366 (69%), Positives = 299/366 (81%), Gaps = 2/366 (0%)
 Frame = +2

Query: 5    RAALGSREFGIHNEVSVASNSLAPGSKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWS 184
            RAA+G R+ G  NE+SVASNS A GS   K  ME    E  E++VTRAP+NGCGIPWNWS
Sbjct: 275  RAAIGLRDIGAQNELSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPWNWS 334

Query: 185  RIHHRGKSILDIAGRSLSCGLSDSRLRKGRCISQGG--LDMDGECNHSGXXXXXXXXXXG 358
            RIHHRGK+ LD+AGRSLSCGLSDSRLR+G  + QG    DM    +HS            
Sbjct: 335  RIHHRGKTFLDMAGRSLSCGLSDSRLRRGGSVPQGRDVSDMPMASDHSSASTKSDAE--A 392

Query: 359  TPLLVEPSGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRH 538
             PLLVE SGSQES++ AAWVH+YSGELGIFAD+ L+HD+DSDLASEARS +++  RGYR 
Sbjct: 393  LPLLVEASGSQESTENAAWVHDYSGELGIFADNLLRHDIDSDLASEARSGDQRKFRGYRQ 452

Query: 539  RRHQSLTQKYMPRTFRDLVGQNLAVQALSNAVSKRKVGFLYVFYGPHGTGKTSCARIFAR 718
             RHQ+LTQKYMPRTF  LVGQNL  QALSNAV KRKVGFLYVFYGPHGTGKTSCARIFAR
Sbjct: 453  DRHQNLTQKYMPRTFGGLVGQNLVAQALSNAVVKRKVGFLYVFYGPHGTGKTSCARIFAR 512

Query: 719  ALNCQSLDHPKPCGTCSSCVAHDLGKSRNVREIGPVGNINFENIMDLLENMLVNQLQSQH 898
            ALNC S++HPKPCG C+SC+AHD+GKSRN+RE+GPV N++FE IM+LL+N++ +QL +Q+
Sbjct: 513  ALNCPSMEHPKPCGFCNSCIAHDMGKSRNIREVGPVSNLDFEGIMNLLDNVIASQLPTQY 572

Query: 899  KVFILDDCDTLPPDSWSAISKAIDRAPRRVVFILISTIVDHLPHIIVSRCQKFFFPKLKD 1078
            +VFI DDCDTL PD WSAISK IDRAPRR+VF+L+S+ +D LPHII+SRCQKFFFPKLKD
Sbjct: 573  RVFIFDDCDTLSPDCWSAISKLIDRAPRRMVFVLVSSTLDVLPHIIISRCQKFFFPKLKD 632

Query: 1079 ADIIYT 1096
            ADIIYT
Sbjct: 633  ADIIYT 638


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  499 bits (1284), Expect = e-139
 Identities = 249/368 (67%), Positives = 299/368 (81%), Gaps = 5/368 (1%)
 Frame = +2

Query: 8    AALGSREFGIHNEVSVASNSLAPGSKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSR 187
            +A  SR+ G   E+SVASNS A GS + +Y+ME  + E  +Q+VTRAP+NGCGIPWNWS 
Sbjct: 276  SAPASRDVGGQKEMSVASNSFAQGSARPRYHME--EEEYGDQNVTRAPRNGCGIPWNWSG 333

Query: 188  IHHRGKSILDIAGRSLSCGLSDSRLRKGRCISQG----GLDMDGECNHSGXXXXXXXXXX 355
            IHHRGK+ILDIAGRSLSCGLSD+R  KG   S G    G+ +  + + S           
Sbjct: 334  IHHRGKTILDIAGRSLSCGLSDTR--KGSTASHGRDFPGMPVASDRSSSSTKSDVE---- 387

Query: 356  GTPLLVEPSGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHE-RQTGRGY 532
              PLLVE SGSQES+D A WVH+YSGELGI+ADH LK+D+DSDLASEARS E R+ GR  
Sbjct: 388  ALPLLVEASGSQESTDNAGWVHDYSGELGIYADHLLKNDIDSDLASEARSGEQRKLGRN- 446

Query: 533  RHRRHQSLTQKYMPRTFRDLVGQNLAVQALSNAVSKRKVGFLYVFYGPHGTGKTSCARIF 712
            ++ RHQ+LTQ+YMPRTFRDLVGQNLA QALSNA  +RKVGFLYVFYGPHGTGKTSCARIF
Sbjct: 447  QNGRHQNLTQRYMPRTFRDLVGQNLAAQALSNAAVRRKVGFLYVFYGPHGTGKTSCARIF 506

Query: 713  ARALNCQSLDHPKPCGTCSSCVAHDLGKSRNVREIGPVGNINFENIMDLLENMLVNQLQS 892
            +RALNCQSL+HPKPCG C+SC++HD+GKSRN+RE+GPV N +F++I+DLL+NM+++Q  S
Sbjct: 507  SRALNCQSLEHPKPCGYCNSCISHDMGKSRNIREVGPVSNFDFKSIIDLLDNMIISQTPS 566

Query: 893  QHKVFILDDCDTLPPDSWSAISKAIDRAPRRVVFILISTIVDHLPHIIVSRCQKFFFPKL 1072
            Q++VFI DDCDTL PD WSAISK IDRAPRRVVF+L+ + +D LPHII+SRCQKFFFPKL
Sbjct: 567  QYRVFIFDDCDTLAPDCWSAISKVIDRAPRRVVFVLVCSSLDVLPHIIISRCQKFFFPKL 626

Query: 1073 KDADIIYT 1096
            KDADIIYT
Sbjct: 627  KDADIIYT 634


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  497 bits (1279), Expect = e-138
 Identities = 243/364 (66%), Positives = 283/364 (77%)
 Frame = +2

Query: 5    RAALGSREFGIHNEVSVASNSLAPGSKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWS 184
            R A  SR+ G  NE+SVASNSLA      KY++E  D E  +++VTRAPKNGCGIPWNWS
Sbjct: 276  RVATTSRDIGAENEISVASNSLA----HHKYHLEEAD-EFADENVTRAPKNGCGIPWNWS 330

Query: 185  RIHHRGKSILDIAGRSLSCGLSDSRLRKGRCISQGGLDMDGECNHSGXXXXXXXXXXGTP 364
            RIHHRGK+ LD+AGRSLSCGLSDSRL+KG   + G    +                   P
Sbjct: 331  RIHHRGKTFLDLAGRSLSCGLSDSRLKKGTFTANGRNISEMPVASERSSSCTKSDAEALP 390

Query: 365  LLVEPSGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRR 544
            LLVE SGS  S++ A W H+YSGELG+F D+  KHD+DSDLASEARS +++  RG RH R
Sbjct: 391  LLVEASGSHASTENACWDHDYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSR 450

Query: 545  HQSLTQKYMPRTFRDLVGQNLAVQALSNAVSKRKVGFLYVFYGPHGTGKTSCARIFARAL 724
            HQSLTQKYMP+TFRD++GQNL  QALSNAV KRKVG LYVFYGPHGTGKTSCARIFARAL
Sbjct: 451  HQSLTQKYMPQTFRDMIGQNLVAQALSNAVMKRKVGLLYVFYGPHGTGKTSCARIFARAL 510

Query: 725  NCQSLDHPKPCGTCSSCVAHDLGKSRNVREIGPVGNINFENIMDLLENMLVNQLQSQHKV 904
            NC S +HPKPCG C+ CVAHD+GKSRN+RE+GPV N +FE IMDLL+NM ++QL S ++V
Sbjct: 511  NCNSSEHPKPCGFCNYCVAHDMGKSRNIREVGPVSNFDFEGIMDLLDNMTLSQLPSHYRV 570

Query: 905  FILDDCDTLPPDSWSAISKAIDRAPRRVVFILISTIVDHLPHIIVSRCQKFFFPKLKDAD 1084
            FI DDCDTL  D W+AISK IDR PRRVVFIL+S+ +D LPHII+SRCQKFFFPKLKDAD
Sbjct: 571  FIFDDCDTLSTDCWNAISKVIDRVPRRVVFILVSSSLDVLPHIIISRCQKFFFPKLKDAD 630

Query: 1085 IIYT 1096
            IIYT
Sbjct: 631  IIYT 634


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  496 bits (1278), Expect = e-138
 Identities = 244/364 (67%), Positives = 284/364 (78%)
 Frame = +2

Query: 5    RAALGSREFGIHNEVSVASNSLAPGSKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWS 184
            R A  SR+    NE+SVASNSLA  S   KY++E  D E  +++VTRAPKNGCGIPWNWS
Sbjct: 276  RVATTSRDIVAENELSVASNSLAQASVHHKYHLEEAD-EFADENVTRAPKNGCGIPWNWS 334

Query: 185  RIHHRGKSILDIAGRSLSCGLSDSRLRKGRCISQGGLDMDGECNHSGXXXXXXXXXXGTP 364
            RIHHRGK+ LD+AGRSLSCGLSDSRL+KG   + G    +                   P
Sbjct: 335  RIHHRGKTFLDMAGRSLSCGLSDSRLKKGTFAANGRNISEMPVASERSSSCTRSDAEALP 394

Query: 365  LLVEPSGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRR 544
            LLVE SGS  S++ A W H YSGELG+F D+  KHD+DSDLASEARS +++  RG RH R
Sbjct: 395  LLVEASGSHASTENACWDHYYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSR 454

Query: 545  HQSLTQKYMPRTFRDLVGQNLAVQALSNAVSKRKVGFLYVFYGPHGTGKTSCARIFARAL 724
            HQSLTQKYMPRTFRD+VGQNL  QALSNAV K+KVG LYVFYGPHGTGKTS ARIFARAL
Sbjct: 455  HQSLTQKYMPRTFRDMVGQNLVAQALSNAVMKKKVGLLYVFYGPHGTGKTSSARIFARAL 514

Query: 725  NCQSLDHPKPCGTCSSCVAHDLGKSRNVREIGPVGNINFENIMDLLENMLVNQLQSQHKV 904
            NC S +HPKPCG C+ CVAHD+GKSRN+RE+GPV N +FE+IM+LL+NM+V+QL S ++V
Sbjct: 515  NCNSSEHPKPCGFCNYCVAHDMGKSRNIREVGPVSNFDFESIMELLDNMIVSQLPSHYRV 574

Query: 905  FILDDCDTLPPDSWSAISKAIDRAPRRVVFILISTIVDHLPHIIVSRCQKFFFPKLKDAD 1084
            FI DDCDTL  D W+AISK IDRAPRRVVFIL+S+ +D LPHII+SRCQKFFFPKLKDAD
Sbjct: 575  FIFDDCDTLSTDCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKFFFPKLKDAD 634

Query: 1085 IIYT 1096
            IIYT
Sbjct: 635  IIYT 638


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
            gi|355482867|gb|AES64070.1| DNA polymerase III subunit
            gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  496 bits (1277), Expect = e-138
 Identities = 246/373 (65%), Positives = 289/373 (77%), Gaps = 8/373 (2%)
 Frame = +2

Query: 2    ARAALGSREFGIHNEVSVASNSLAPGSKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNW 181
            AR A  SR+ G  NE+SVASNSL  GS   KY+ E  D  A + +VTRAPKNGCG+PWNW
Sbjct: 280  ARVATTSRDIGAENELSVASNSLPEGSAHQKYHSEEVDNYA-DDNVTRAPKNGCGMPWNW 338

Query: 182  SRIHHRGKSILDIAGRSLSCGLSDSRLRKGRCISQGGLDM-------DGECNHSGXXXXX 340
            SRIHHRGK+ LDIAGRSLSCGLSDSRL+KGR ++  G ++       D  C+ +      
Sbjct: 339  SRIHHRGKTFLDIAGRSLSCGLSDSRLKKGRSLTSNGRNISVMPVAADDSCSCTNSEAE- 397

Query: 341  XXXXXGTPLLVEPSGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQT 520
                   PLLV+ SGS  S++ A W H YSGELGI+ D+  K D+DSDLASEARS  +  
Sbjct: 398  -----ALPLLVDASGSHGSTENACWGHGYSGELGIYGDNLFKQDIDSDLASEARSGSQHN 452

Query: 521  G-RGYRHRRHQSLTQKYMPRTFRDLVGQNLAVQALSNAVSKRKVGFLYVFYGPHGTGKTS 697
              R   H RHQSLTQKY+PRTFRD+VGQNL  QALSNAVS+RKVG LYVFYGPHGTGKTS
Sbjct: 453  KLRRNHHSRHQSLTQKYIPRTFRDMVGQNLVAQALSNAVSRRKVGLLYVFYGPHGTGKTS 512

Query: 698  CARIFARALNCQSLDHPKPCGTCSSCVAHDLGKSRNVREIGPVGNINFENIMDLLENMLV 877
            CARIFARALNC S +HPKPCG C+ C+AHD+GKSRN+RE+GPV N +FENIMDLL+NM+V
Sbjct: 513  CARIFARALNCSSSEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFENIMDLLDNMIV 572

Query: 878  NQLQSQHKVFILDDCDTLPPDSWSAISKAIDRAPRRVVFILISTIVDHLPHIIVSRCQKF 1057
            +QL SQ++VFI DDCD+L  D W+AISK IDRAPRRVVFIL+ST +D LPHII+SRCQKF
Sbjct: 573  SQLPSQYRVFIFDDCDSLSADCWNAISKVIDRAPRRVVFILVSTSLDVLPHIIISRCQKF 632

Query: 1058 FFPKLKDADIIYT 1096
            FFPKLKD+DI+YT
Sbjct: 633  FFPKLKDSDIVYT 645