BLASTX nr result

ID: Coptis21_contig00003254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003254
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324384.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002312349.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002312348.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002315976.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002305971.1| predicted protein [Populus trichocarpa] gi|1...    72   4e-11

>ref|XP_002324384.1| predicted protein [Populus trichocarpa] gi|222865818|gb|EEF02949.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = +1

Query: 1   IEEFKGESGWKRFGCYVLVERFALSRLDGTSLLTCDFRHNHQIHSKWE 144
           +EEF G  GWK+FGCYVLVERF L R+DG+ +LT DF+H HQ+ SKWE
Sbjct: 352 VEEFGGVGGWKKFGCYVLVERFVLRRMDGSLVLTYDFKHTHQVRSKWE 399


>ref|XP_002312349.1| predicted protein [Populus trichocarpa] gi|222852169|gb|EEE89716.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +1

Query: 1   IEEFKGESGWKRFGCYVLVERFALSRLDGTSLLTCDFRHNHQIHSKW 141
           +EEF G  GWK+ GCYVLVERF L R+DG+ +LT DF+H HQI SKW
Sbjct: 338 VEEFGGIGGWKKLGCYVLVERFVLRRMDGSLVLTYDFKHTHQIRSKW 384


>ref|XP_002312348.1| predicted protein [Populus trichocarpa] gi|222852168|gb|EEE89715.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = +1

Query: 4   EEFKGESGWKRFGCYVLVERFALSRLDGTSLLTCDFRHNHQIHSKWE 144
           E F G+  W++FGCYVLVERFAL R+DG+ LLT DFRH H+I S+WE
Sbjct: 345 EVFDGKGKWRKFGCYVLVERFALKRMDGSLLLTYDFRHPHRIRSRWE 391


>ref|XP_002315976.1| predicted protein [Populus trichocarpa] gi|222865016|gb|EEF02147.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +1

Query: 4   EEFKGESGWKRFGCYVLVERFALSRLDGTSLLTCDFRHNHQIHSKWE 144
           EEF G+  W++FGCYVLVERFAL R+DG  +LT DFRH  QI SKWE
Sbjct: 340 EEFDGKGEWRKFGCYVLVERFALKRMDGNVVLTFDFRHPLQIRSKWE 386


>ref|XP_002305971.1| predicted protein [Populus trichocarpa] gi|118484298|gb|ABK94028.1|
           unknown [Populus trichocarpa]
           gi|222848935|gb|EEE86482.1| predicted protein [Populus
           trichocarpa]
          Length = 392

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 7   EFKGESGWKRFGCYVLVERFALSRLDGTSLLTCDFRHNHQIHSKWE 144
           E + E+GW++FGCY LVE F L R+DG+ +L CDFRH H+I SKWE
Sbjct: 347 EIRSENGWRKFGCYALVESFVLRRMDGSLVLRCDFRHTHKIKSKWE 392


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