BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003250
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15653.3| unnamed protein product [Vitis vinifera]              315   9e-84
ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like ...   311   8e-83
ref|XP_002318720.1| predicted protein [Populus trichocarpa] gi|1...   306   4e-81
ref|XP_002279258.1| PREDICTED: 60S ribosomal protein L17-2-like ...   305   6e-81
ref|XP_002322246.1| predicted protein [Populus trichocarpa] gi|2...   302   6e-80

>emb|CBI15653.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  315 bits (806), Expect = 9e-84
 Identities = 159/185 (85%), Positives = 166/185 (89%), Gaps = 2/185 (1%)
 Frame = +2

Query: 29  AAMGKYSKEPDNPTKSCKARGSALRVHFKNTRETAHSIRKMALIKAKRYLEDVLAHKQAI 208
           AAM KYS+EPDNPTKSCKARGS LRVHFKNTRETAH+IRK+ L KAKRYLEDVLAHKQAI
Sbjct: 25  AAMVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAI 84

Query: 209 PFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDTLYVSHI 388
           PF+RFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAD+KGLDVD+LYVSHI
Sbjct: 85  PFQRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHI 144

Query: 389 QVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXXTQLAPRKAKKT--LQ 562
           QVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LS           TQLAPRK KKT  L+
Sbjct: 145 QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVQKEPDTQLAPRKTKKTQALR 204

Query: 563 SGASS 577
           SGASS
Sbjct: 205 SGASS 209


>ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like isoform 1 [Vitis
           vinifera] gi|359491070|ref|XP_003634214.1| PREDICTED:
           60S ribosomal protein L17-2-like isoform 2 [Vitis
           vinifera]
          Length = 183

 Score =  311 bits (798), Expect = 8e-83
 Identities = 157/183 (85%), Positives = 164/183 (89%), Gaps = 2/183 (1%)
 Frame = +2

Query: 35  MGKYSKEPDNPTKSCKARGSALRVHFKNTRETAHSIRKMALIKAKRYLEDVLAHKQAIPF 214
           M KYS+EPDNPTKSCKARGS LRVHFKNTRETAH+IRK+ L KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIPF 60

Query: 215 RRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDTLYVSHIQV 394
           +RFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAD+KGLDVD+LYVSHIQV
Sbjct: 61  QRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHIQV 120

Query: 395 NQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXXTQLAPRKAKKT--LQSG 568
           NQAQKQRRRTYRAHGRINPYMSSPCHIEL LS           TQLAPRK KKT  L+SG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVQKEPDTQLAPRKTKKTQALRSG 180

Query: 569 ASS 577
           ASS
Sbjct: 181 ASS 183


>ref|XP_002318720.1| predicted protein [Populus trichocarpa] gi|118484704|gb|ABK94222.1|
           unknown [Populus trichocarpa]
           gi|222859393|gb|EEE96940.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score =  306 bits (783), Expect = 4e-81
 Identities = 153/181 (84%), Positives = 159/181 (87%)
 Frame = +2

Query: 35  MGKYSKEPDNPTKSCKARGSALRVHFKNTRETAHSIRKMALIKAKRYLEDVLAHKQAIPF 214
           M KYS+EPDNPTKSCKARGS LRVHFKNTRETA SIRK+ L KAK YLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFSIRKLPLGKAKGYLEDVLAHKQAIPF 60

Query: 215 RRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDTLYVSHIQV 394
           RRFCRGVGRTAQAKNRHSNGQGRWP KSAKFILDLLKNAESNA+VKGLDVD LY+SHIQV
Sbjct: 61  RRFCRGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 395 NQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXXTQLAPRKAKKTLQSGAS 574
           NQAQKQRRRTYRAHGRINPYMSSPCHIELTLS           TQ+APRK K  L+SGAS
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEADTQIAPRKPKGALRSGAS 180

Query: 575 S 577
           S
Sbjct: 181 S 181


>ref|XP_002279258.1| PREDICTED: 60S ribosomal protein L17-2-like [Vitis vinifera]
          Length = 185

 Score =  305 bits (782), Expect = 6e-81
 Identities = 151/184 (82%), Positives = 162/184 (88%)
 Frame = +2

Query: 35  MGKYSKEPDNPTKSCKARGSALRVHFKNTRETAHSIRKMALIKAKRYLEDVLAHKQAIPF 214
           M KYS+EPDNPTKSCKARGS LRVHFKNTRETAH+IRK+ L KAKRYLEDVL HKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPF 60

Query: 215 RRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDTLYVSHIQV 394
            RFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAD+KGLDVD+LY+SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYISHIQV 120

Query: 395 NQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXXTQLAPRKAKKTLQSGAS 574
           NQAQKQRRRTYRAHGRINPYMSSPCHIEL LS           TQLA  K+KK+L+ GAS
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKSKKSLRGGAS 180

Query: 575 S*VA 586
           + +A
Sbjct: 181 TRIA 184


>ref|XP_002322246.1| predicted protein [Populus trichocarpa] gi|222869242|gb|EEF06373.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  302 bits (773), Expect = 6e-80
 Identities = 152/181 (83%), Positives = 157/181 (86%)
 Frame = +2

Query: 35  MGKYSKEPDNPTKSCKARGSALRVHFKNTRETAHSIRKMALIKAKRYLEDVLAHKQAIPF 214
           M KYS+EPDN TKSCKARGS LRVHFKNTRETA SIRKM L KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNQTKSCKARGSDLRVHFKNTRETAFSIRKMPLDKAKRYLEDVLAHKQAIPF 60

Query: 215 RRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDTLYVSHIQV 394
           RRFC GVGRTAQAKNRHSNGQGRWP KSAKFILDLLKNAESNA+VKGLDVD LY+SHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 395 NQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXXTQLAPRKAKKTLQSGAS 574
           NQAQKQRRRTYRAHGRINPYMSSPCHIEL LS           TQ+APRK K  L+SGAS
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADTQIAPRKPKGALRSGAS 180

Query: 575 S 577
           S
Sbjct: 181 S 181