BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003201
         (4524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83280.1| hypothetical protein VITISV_005888 [Vitis vinifera]   100   4e-23
ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like...   100   4e-23
ref|XP_002530499.1| aprataxin, putative [Ricinus communis] gi|22...    98   2e-21
ref|XP_002323598.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-20
ref|XP_003561732.1| PREDICTED: transcription factor bHLH140-like...    93   2e-20

>emb|CAN83280.1| hypothetical protein VITISV_005888 [Vitis vinifera]
          Length = 864

 Score = 99.8 bits (247), Expect(2) = 4e-23
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = -3

Query: 409 SLAPGSALVVPLPLTSLLYKKEGITHVIHVLGPNMNPHKPNILNSDYNKGCNVLCKAYSS 230
           SL PG ALVVPLP TS L+ +EG+THVIHVLGPNMN  +PN LN+DY KG  VL +AY+S
Sbjct: 510 SLIPGKALVVPLPSTSPLFSREGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLREAYTS 569

Query: 229 LFEGFACI 206
           LFEGFA I
Sbjct: 570 LFEGFASI 577



 Score = 38.1 bits (87), Expect(2) = 4e-23
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 141 RDFSNNDQKIKRGATYDSERNKKCKGLDGE 52
           ++  N+DQKIKR   Y+SE +KKCKG   E
Sbjct: 609 KNVPNHDQKIKRVGVYESETSKKCKGFQDE 638


>ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like [Vitis vinifera]
          Length = 734

 Score = 99.8 bits (247), Expect(2) = 4e-23
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = -3

Query: 409 SLAPGSALVVPLPLTSLLYKKEGITHVIHVLGPNMNPHKPNILNSDYNKGCNVLCKAYSS 230
           SL PG ALVVPLP TS L+ +EG+THVIHVLGPNMN  +PN LN+DY KG  VL +AY+S
Sbjct: 373 SLIPGKALVVPLPSTSPLFSREGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLREAYTS 432

Query: 229 LFEGFACI 206
           LFEGFA I
Sbjct: 433 LFEGFASI 440



 Score = 38.1 bits (87), Expect(2) = 4e-23
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 141 RDFSNNDQKIKRGATYDSERNKKCKGLDGE 52
           ++  N+DQKIKR   Y+SE +KKCKG   E
Sbjct: 472 KNVPNHDQKIKRVGVYESETSKKCKGFQDE 501


>ref|XP_002530499.1| aprataxin, putative [Ricinus communis] gi|223529956|gb|EEF31883.1|
           aprataxin, putative [Ricinus communis]
          Length = 749

 Score = 98.2 bits (243), Expect(2) = 2e-21
 Identities = 44/68 (64%), Positives = 52/68 (76%)
 Frame = -3

Query: 409 SLAPGSALVVPLPLTSLLYKKEGITHVIHVLGPNMNPHKPNILNSDYNKGCNVLCKAYSS 230
           SL PG A+VVPLP  S LY +EG++H+IHVLGPNMNP +PN LN DY KGC +L  AY+S
Sbjct: 389 SLLPGHAVVVPLPSNSPLYHREGVSHIIHVLGPNMNPQRPNCLNGDYAKGCKILSDAYTS 448

Query: 229 LFEGFACI 206
           LF GF  I
Sbjct: 449 LFGGFVSI 456



 Score = 33.9 bits (76), Expect(2) = 2e-21
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
 Frame = -1

Query: 207 SAVNKQITEKGSIEDLPQRQSTRDFS---------NNDQKIKRGATYDSERNKKCKGLDG 55
           S +  Q     S E+L   QS +D S         N DQKIKR   Y +E++KK KG   
Sbjct: 455 SILQNQAKSGKSRENLVSDQSLQDMSHDIPRNILTNGDQKIKRDDDYMTEKSKKYKGSQN 514

Query: 54  E 52
           E
Sbjct: 515 E 515


>ref|XP_002323598.1| predicted protein [Populus trichocarpa] gi|222868228|gb|EEF05359.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score = 96.3 bits (238), Expect(2) = 1e-20
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 409 SLAPGSALVVPLPLTSLLYKKEGITHVIHVLGPNMNPHKPNILNSDYNKGCNVLCKAYSS 230
           SL PG A+VVPLP  S LY +E ++HVIHVLGPNMNP +PN LN+DY KGC++L +AY+S
Sbjct: 360 SLLPGHAVVVPLPSDSPLYTREEVSHVIHVLGPNMNPQRPNSLNNDYTKGCSILREAYTS 419

Query: 229 LFEGFACI 206
           LF GF  I
Sbjct: 420 LFTGFLSI 427



 Score = 33.5 bits (75), Expect(2) = 1e-20
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -1

Query: 207 SAVNKQITEK--GSIEDL--PQRQSTRDFSNNDQKIKRGATYDSERNKKCKGLDGE 52
           S + ++I EK   S  DL  P        +N+DQKIKR      ER+KKCKG   E
Sbjct: 432 SKLPRRIIEKLESSPSDLKDPSHGPRNHLTNSDQKIKRDDDCVYERSKKCKGTHDE 487


>ref|XP_003561732.1| PREDICTED: transcription factor bHLH140-like [Brachypodium
           distachyon]
          Length = 762

 Score = 93.2 bits (230), Expect(2) = 2e-20
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = -3

Query: 409 SLAPGSALVVPLPLTSLLYKKEGITHVIHVLGPNMNPHKPNILNSDYNKGCNVLCKAYSS 230
           +L PGS++ VPLP TS L ++EG+THVIHVLGPNMNP +P+ L +DY +GC +L  AY+S
Sbjct: 392 TLRPGSSVTVPLPSTSPLRQREGVTHVIHVLGPNMNPMRPDCLKNDYTQGCKILHDAYNS 451

Query: 229 LFEGFACI 206
           LFE FA I
Sbjct: 452 LFENFASI 459



 Score = 35.8 bits (81), Expect(2) = 2e-20
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -1

Query: 207 SAVNKQITEKGSIEDLPQRQSTRDFSNNDQKIKRGATYDSERNKKCK 67
           +++ +  T K + E   ++ ++R  S  D K+KR  ++DSER KKCK
Sbjct: 457 ASIFQSYTGKQNDETSSKKSASRVISPTDSKMKREDSHDSERTKKCK 503