BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003182
         (1598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   124   5e-26
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   124   9e-26
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   122   2e-25
gb|ABR18787.1| class S F-box protein [Nicotiana alata]                121   6e-25
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-24

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  124 bits (312), Expect = 5e-26
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 19/332 (5%)
 Frame = +2

Query: 203  RKHRDEKEQQNKKEV-FSKLPVDIVLDIFARLPLDTISECKWVSKTWYDLVLHPRFADIY 379
            RK R  K + + +      LP +I  DI +RLP+ ++ + K V + W  LV  P+  D+Y
Sbjct: 9    RKRRKTKVEYDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLY 68

Query: 380  FARSR--TSLPCVVFFSRYLPSYLIDPISLGNYETSATAYNLKLKGFKENFRIKCGWVC- 550
             + S   T  PC++    +       PI    Y     A+  + +  K   RI   +   
Sbjct: 69   LSCSTQDTDHPCLILHCDF-------PIRNNLYFVDFAAHEEEKEKVK---RIPAPFSSM 118

Query: 551  ---FEVVGTVNGLICFCPENCDYEPVTYYICNPITRDYFMPPTSPKKDIVPVGSGFGFDS 721
               FEVVG+ NGL+C      +    + YI NP T  Y   P S +     V SGFGF+ 
Sbjct: 119  MPEFEVVGSCNGLLCLSDSLYN---DSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNP 175

Query: 722  LSNEYKLLRILRNSSEDG------------NEVEVFTLGSDSWREITINVSYIYYVSRKF 865
             + EYK++RI+   +  G            +EV++ TLG   WR +   VSY   V R  
Sbjct: 176  KTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLG-KVSY-RLVRRAS 233

Query: 866  CMLVNGCLHWVANLRTTKNVECTSILSFNVATEDFDLIKLPPLRTKGDWGKTETELMVLG 1045
              LVNG LHW++  R  +N     ++SF++  E F  +  P     G   +    L+VL 
Sbjct: 234  GALVNGRLHWIS--RPCRNKPARRLVSFDLTDEQFREVSKPDC---GGLNRCNYHLVVLR 288

Query: 1046 ERLCVMENSPWGEKEIWMMKDYGVHSSWAKEY 1141
              L       +G  EIW+MK+Y V  SW KEY
Sbjct: 289  GCLSAAVYCNYGRLEIWVMKEYNVKESWVKEY 320


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
            gi|223543465|gb|EEF44996.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  124 bits (310), Expect = 9e-26
 Identities = 104/322 (32%), Positives = 151/322 (46%), Gaps = 11/322 (3%)
 Frame = +2

Query: 212  RDEKEQQNKKEVFSKLPVDIVLDIFARLPLDTISECKWVSKTWYDLVLHPRFADIYFARS 391
            ++E  +    E F KLP +I  DI +R P+ ++ ECK VS+ WY  V +P  A+++  R+
Sbjct: 7    KEETSRNPGSESFEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRA 66

Query: 392  RTSLPCVVFFSRYLPSYLIDPISLGNYETSATAYNLKLKGFKENFRIKCGWVCFEVVGTV 571
                 C++FFS + P   ++ + + + E        KLK  K  F        FEVVG+ 
Sbjct: 67   AEQNLCLLFFSDW-PRSKLELVQVEHPEPR------KLKTLKTPFESVLSE--FEVVGSC 117

Query: 572  NGLICFCPENCDYEPVTYYICNPIT---RDYFMPPTSPKKDIVPVGSGFGFDSLSNEYKL 742
            NGLIC      D +P+  YI NP T   R+      SP   I  V  GFGF     EYK+
Sbjct: 118  NGLICLYDYFSD-DPL--YIYNPFTIECRELPRVEASPHSVICRVVFGFGFHPKMEEYKV 174

Query: 743  LRIL----RNSSEDGNEVEVF--TLGSDSWREITINVSYIYY--VSRKFCMLVNGCLHWV 898
            ++I+     N+   G   E F  T  + +WR    N+  I Y         LVN  LHW+
Sbjct: 175  IKIVYYKQGNNDFSGGAPEAFVLTANTPTWR----NIGKIGYDLNGPTSEALVNEKLHWL 230

Query: 899  ANLRTTKNVECTSILSFNVATEDFDLIKLPPLRTKGDWGKTETELMVLGERLCVMENSPW 1078
                  + V+   I+SF++ TE F  +  P     G   +    L+ L   L  + +   
Sbjct: 231  TFCLVHEEVKYREIVSFDLETEQFQDVPRPGC---GGLDQINYHLVTLRGCLSAIVSCNE 287

Query: 1079 GEKEIWMMKDYGVHSSWAKEYV 1144
            G  EIWMMK Y V +SW KE +
Sbjct: 288  GSNEIWMMKIYNVKASWRKEMI 309


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  122 bits (307), Expect = 2e-25
 Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 17/330 (5%)
 Frame = +2

Query: 203  RKHRDEKEQQNKKEVFSKLPVDIVLDIFARLPLDTISECKWVSKTWYDLVLHPRFADIYF 382
            ++ + + E   +      LP +I  DI +RLP+ ++ + K V + W  + L P   ++Y 
Sbjct: 10   KRRKTKLEDDPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYL 69

Query: 383  ARSRTSL-PCVVFFSRYLPSYLIDPISLGNYETSATAYNLKLKGFKENFRIKCGWVC--- 550
            + S     PCV+    +       PI    Y     A+  + +  K   RI+  +     
Sbjct: 70   SCSTQETDPCVILHCDF-------PIRNNLYFVDFAAHEEEKEKVK---RIRAPFSSMMP 119

Query: 551  -FEVVGTVNGLICFCPENCDYEPVTYYICNPITRDYFMPPTSPKKDIVPVGSGFGFDSLS 727
             FEVVG+ NGL+C      +    + YI NP T  Y   P S +     V  GFGF+  +
Sbjct: 120  EFEVVGSCNGLLCLSDSLFND---SLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKT 176

Query: 728  NEYKLLRILRNSSEDG------------NEVEVFTLGSDSWREITINVSYIYYVSRKFCM 871
            NEYK++RI+   +  G            ++V++ TLG   WR +   VSY   V R    
Sbjct: 177  NEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLG-KVSY-RLVRRASET 234

Query: 872  LVNGCLHWVANLRTTKNVECTSILSFNVATEDFDLIKLPPLRTKGDWGKTETELMVLGER 1051
            LVNG LHWV+  R  +N     ++SF++  E F  +  P     G   + +  L VL   
Sbjct: 235  LVNGRLHWVS--RPCRNKPARRLVSFDLTDEQFREVPKPDC---GGLNRCDYHLAVLRGC 289

Query: 1052 LCVMENSPWGEKEIWMMKDYGVHSSWAKEY 1141
            L V     +G  EIW+MK+Y V  SW KEY
Sbjct: 290  LSVAVYCNYGRLEIWVMKEYNVKESWVKEY 319


>gb|ABR18787.1| class S F-box protein [Nicotiana alata]
          Length = 392

 Score =  121 bits (303), Expect = 6e-25
 Identities = 103/337 (30%), Positives = 155/337 (45%), Gaps = 40/337 (11%)
 Frame = +2

Query: 251  SKLPVDIVLDIFARLPLDTISECKWVSKTWYDLVLHPRFADIYFARSRTSLPCVVFFSRY 430
            +KLP D+++DI  RLP  ++   K VSKTWY ++  P F  I++     S   +V F RY
Sbjct: 9    TKLPYDVMIDIMKRLPAKSVIRIKCVSKTWYYMINSPDFISIHYNYDYPSKHFIV-FKRY 67

Query: 431  LPSYLIDPISL-GNYETSATAYNLKLKGFKENFRIKCGWVCFEVVGTVNGLICFCPENCD 607
            L     + I   G    S    +  LK    N      ++   + G  NG++C       
Sbjct: 68   LEIDAEESIYYNGKNMLSVHCNDDSLKSVAPNTEYLDDYIGVNIAGPCNGIVCI----GS 123

Query: 608  YEPVTYYICNPITRDYF-MPPT--------SPKKDI---VPVGSGFGFDSLSNEYKLLRI 751
            Y  +  Y  NP  R+++ +PP+        S  K +   + +  G GFD  +N+YK++RI
Sbjct: 124  YRGIVLY--NPTLREFWELPPSILPPPPYLSSDKKLNYWMDMTMGIGFDPNTNDYKVVRI 181

Query: 752  LR-----------NSSEDGNEVEVFTLGSDSWREI--------TINVSYIYYVSRKFCML 874
            LR           N   D ++VEV+ L ++SWR I        T++ S++++        
Sbjct: 182  LRPAHEYTFEDFDNHIRDVSKVEVYNLSTNSWRRIKDLECLVDTLHCSHVFF-------- 233

Query: 875  VNGCLHWVANLRTTKNVECTSILSFNVATEDFDLIKLPPLRTKGDWGKTETELMVLGERL 1054
             NG  HW    R TK+ +   I+SFN + E F +I  P    +G   +    L VL E L
Sbjct: 234  -NGAFHW---RRYTKS-DDYFIVSFNFSIESFQMIPSP----EGLTDEGRKSLFVLSESL 284

Query: 1055 ---CVMENSP-----WGEKEIWMMKDYGVHSSWAKEY 1141
               C  EN P         +IW+MK YGV  SW KE+
Sbjct: 285  ALICFTENYPREMLVHQSIDIWVMKKYGVRESWIKEF 321


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  120 bits (301), Expect = 1e-24
 Identities = 99/324 (30%), Positives = 139/324 (42%), Gaps = 5/324 (1%)
 Frame = +2

Query: 194  PQPRKHRDEKEQQ----NKKEVFSKLPVDIVLDIFARLPLDTISECKWVSKTWYDLVLHP 361
            P PR  RD   Q     +     S LP+  ++DI +RLP  TI  C  V K W DL+L P
Sbjct: 10   PSPRGSRDIDAQTKGGGDDFRSISALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAP 69

Query: 362  RFADIYFARSRTSLPCVVFFSRYLPSYLIDPISLGNYETSATAYNLKLKGFKENFRIKCG 541
             FA ++  R+  SL  ++   R+        + L + E S             +F    G
Sbjct: 70   DFAKLHHTRAPASL--ILRSHRHGRRRRPRSLCLLDLEASDICSPDAAVKLSPDFGFPTG 127

Query: 542  WVCFEVVGTVNGLICFCPENCDYEPVTYYICNPITRDYFMPPTSPKKDIVPVGSGFGFDS 721
               FE+V T NGLIC       + P    I NP+  DY   P + KK    V S FG   
Sbjct: 128  --NFEIVNTCNGLICI---RHFHSPNDISILNPLVGDYITLPLTKKKHKSYVFSWFGHSP 182

Query: 722  LSNEYKLLRILRNSSEDGNEVEVFTLGSDSWREITINVSYIYYVSRKFCMLVNGCLHWVA 901
             ++EYK+++ ++  S+   E E+ TLG  +W  I           R     V GCLHW+ 
Sbjct: 183  KTDEYKVIQFVQQPSK--LEAEIHTLGKGTWTSIHGGALSPPIDMRCHNAFVGGCLHWIV 240

Query: 902  NLRTTKNVECTSILSFNVATEDFDLIKLPPLRTKGDWGKT-ETELMVLGERLCVMENSPW 1078
            N  +        I       E F  +  PP     D  +T +  L VLG  L   +    
Sbjct: 241  NDPSKSEF----IYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLG 296

Query: 1079 GEKEIWMMKDYGVHSSWAKEYVFE 1150
               +IW+MK YGV  SW KE++ +
Sbjct: 297  DSFDIWVMKQYGVQESWTKEFILK 320