BLASTX nr result

ID: Coptis21_contig00003181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003181
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516809.1| Transmembrane BAX inhibitor motif-containing...    70   2e-24
ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-22
ref|XP_002314428.1| predicted protein [Populus trichocarpa] gi|1...    65   4e-22
ref|XP_002279368.2| PREDICTED: BI1-like protein-like [Vitis vini...    93   2e-17
ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sa...    75   7e-12

>ref|XP_002516809.1| Transmembrane BAX inhibitor motif-containing protein, putative
           [Ricinus communis] gi|223543897|gb|EEF45423.1|
           Transmembrane BAX inhibitor motif-containing protein,
           putative [Ricinus communis]
          Length = 210

 Score = 70.5 bits (171), Expect(2) = 2e-24
 Identities = 38/54 (70%), Positives = 41/54 (75%), Gaps = 7/54 (12%)
 Frame = +1

Query: 22  MYGFTSVSKG----DLEEG---TLYPGLSYGENELRWGFIRKVYGILSAQILLT 162
           MYGFTS+S      DLE G   TLYPGL  GEN+LRWG IRKVYGILSAQ+LLT
Sbjct: 1   MYGFTSLSSKEKEVDLEAGNGETLYPGLGVGENQLRWGLIRKVYGILSAQLLLT 54



 Score = 67.0 bits (162), Expect(2) = 2e-24
 Identities = 36/72 (50%), Positives = 39/72 (54%)
 Frame = +2

Query: 224 TVLYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHQKHPVNFILLGLFTTCLSVTVGVT 403
           TVLYTP                            YHQKHPVN I+LGLFT  LS+ VGV+
Sbjct: 61  TVLYTPFNTLLGDSPGLLLLLCIVPFVLLWPLHVYHQKHPVNLIVLGLFTVSLSLLVGVS 120

Query: 404 CANTDGKIVLEA 439
           CA TDGKIVLEA
Sbjct: 121 CAQTDGKIVLEA 132


>ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|222852549|gb|EEE90096.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 66.6 bits (161), Expect(2) = 2e-22
 Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 9/57 (15%)
 Frame = +1

Query: 19  KMYGFTSVSKGD------LEEG---TLYPGLSYGENELRWGFIRKVYGILSAQILLT 162
           +M+G++SVS  D      LE G   TLYPGLS GEN+LRWG IRKVYGIL+AQ++LT
Sbjct: 4   EMFGYSSVSNKDAGKEVDLEAGNGETLYPGLSLGENQLRWGLIRKVYGILAAQLILT 60



 Score = 64.3 bits (155), Expect(2) = 2e-22
 Identities = 34/72 (47%), Positives = 38/72 (52%)
 Frame = +2

Query: 224 TVLYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHQKHPVNFILLGLFTTCLSVTVGVT 403
           TVLYTP                            YHQKHPVN I+LGLFT  LS+ VG +
Sbjct: 67  TVLYTPITDLLRGSFGFVMLLSIVPFILLWPLHVYHQKHPVNLIILGLFTVSLSLLVGAS 126

Query: 404 CANTDGKIVLEA 439
           CAN +GKIVLEA
Sbjct: 127 CANIEGKIVLEA 138


>ref|XP_002314428.1| predicted protein [Populus trichocarpa] gi|118486297|gb|ABK94990.1|
           unknown [Populus trichocarpa]
           gi|222863468|gb|EEF00599.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score = 65.5 bits (158), Expect(2) = 4e-22
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 9/56 (16%)
 Frame = +1

Query: 22  MYGFTSVSKGD------LEEG---TLYPGLSYGENELRWGFIRKVYGILSAQILLT 162
           MYG+ SVS  D      LE G   +LYPGLS GEN+LRWG IRKVYGIL+AQ++LT
Sbjct: 1   MYGYASVSNKDGAKEIDLEAGNRESLYPGLSLGENQLRWGLIRKVYGILAAQLVLT 56



 Score = 63.9 bits (154), Expect(2) = 4e-22
 Identities = 33/72 (45%), Positives = 38/72 (52%)
 Frame = +2

Query: 224 TVLYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHQKHPVNFILLGLFTTCLSVTVGVT 403
           T+LYTP                            YHQKHPVN I+LGLFT  LS+ VG +
Sbjct: 63  TILYTPMTDLLKGSFGFVLFLSIVPFILLWPLHVYHQKHPVNLIILGLFTVSLSLLVGAS 122

Query: 404 CANTDGKIVLEA 439
           CAN +GKIVLEA
Sbjct: 123 CANIEGKIVLEA 134


>ref|XP_002279368.2| PREDICTED: BI1-like protein-like [Vitis vinifera]
           gi|297736960|emb|CBI26161.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/48 (95%), Positives = 47/48 (97%), Gaps = 1/48 (2%)
 Frame = +1

Query: 22  MYGFTSVS-KGDLEEGTLYPGLSYGENELRWGFIRKVYGILSAQILLT 162
           MYGFTSVS KGDLEEGTLYPGLSYGENELRWGFIRKVYGIL+AQILLT
Sbjct: 1   MYGFTSVSSKGDLEEGTLYPGLSYGENELRWGFIRKVYGILAAQILLT 48



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +2

Query: 326 YHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEA 439
           Y Q+HP+N I LGLFT  +S+TVGV+CA TDG+IVLEA
Sbjct: 89  YQQRHPLNLIFLGLFTVSMSLTVGVSCAKTDGRIVLEA 126


>ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sativus]
           gi|449471847|ref|XP_004153426.1| PREDICTED: BI1-like
           protein-like [Cucumis sativus]
           gi|449523593|ref|XP_004168808.1| PREDICTED: BI1-like
           protein-like [Cucumis sativus]
          Length = 244

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/52 (76%), Positives = 45/52 (86%), Gaps = 5/52 (9%)
 Frame = +1

Query: 22  MYGFTSVS-KG---DLEEG-TLYPGLSYGENELRWGFIRKVYGILSAQILLT 162
           M+G+T VS KG   DLE G TLYPGLSYGEN+LRWGFIRKVYGIL+AQI+LT
Sbjct: 1   MFGYTGVSNKGGEVDLESGETLYPGLSYGENQLRWGFIRKVYGILAAQIVLT 52



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 326 YHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEA 439
           Y QKHP+N + LG+FT  LS+TVGV+CANTDG+IVLEA
Sbjct: 93  YRQKHPLNLVFLGIFTATLSLTVGVSCANTDGRIVLEA 130


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