BLASTX nr result

ID: Coptis21_contig00003164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003164
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327598.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002528517.1| NADP-specific isocitrate dehydrogenase, puta...   153   1e-35
ref|XP_002270617.1| PREDICTED: isocitrate dehydrogenase [NADP] [...   153   2e-35
ref|XP_002305928.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
gb|ABA18651.1| cytosolic NADP+-isocitrate dehydrogenase [Populus...   150   8e-35

>ref|XP_002327598.1| predicted protein [Populus trichocarpa] gi|222836152|gb|EEE74573.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +1

Query: 1   QKGGETSTNSIASIFAWSRGLAHRAKLDDNPRLLDFTQKLEAACVGTVESGKMTKDLALL 180
           QKGGETSTNSIASIFAWSRGLAHRAKLDDN +LLDFT+KLEAACVG VESGKMTKDLALL
Sbjct: 322 QKGGETSTNSIASIFAWSRGLAHRAKLDDNAKLLDFTEKLEAACVGAVESGKMTKDLALL 381

Query: 181 IHGSKVSRDQYLNTEEFIDA 240
           IHGSKVSRDQYLNTEEFIDA
Sbjct: 382 IHGSKVSRDQYLNTEEFIDA 401


>ref|XP_002528517.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223532077|gb|EEF33886.1| NADP-specific isocitrate
           dehydrogenase, putative [Ricinus communis]
          Length = 413

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/80 (93%), Positives = 78/80 (97%)
 Frame = +1

Query: 1   QKGGETSTNSIASIFAWSRGLAHRAKLDDNPRLLDFTQKLEAACVGTVESGKMTKDLALL 180
           QKGGETSTNSIASIFAWSRGLAHRAKLDDN RLLDFT+KLEAAC+G VESGKMTKDLALL
Sbjct: 322 QKGGETSTNSIASIFAWSRGLAHRAKLDDNARLLDFTEKLEAACIGVVESGKMTKDLALL 381

Query: 181 IHGSKVSRDQYLNTEEFIDA 240
           IHGSKV+RDQYLNTEEFIDA
Sbjct: 382 IHGSKVTRDQYLNTEEFIDA 401


>ref|XP_002270617.1| PREDICTED: isocitrate dehydrogenase [NADP] [Vitis vinifera]
           gi|147826481|emb|CAN72808.1| hypothetical protein
           VITISV_010484 [Vitis vinifera]
           gi|297738151|emb|CBI27352.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +1

Query: 1   QKGGETSTNSIASIFAWSRGLAHRAKLDDNPRLLDFTQKLEAACVGTVESGKMTKDLALL 180
           QKGGETSTNSIASIFAWSRGLAHRAKLDDN RLLDFT+KLEAACVGTVESGKMTKDLALL
Sbjct: 322 QKGGETSTNSIASIFAWSRGLAHRAKLDDNARLLDFTEKLEAACVGTVESGKMTKDLALL 381

Query: 181 IHGSKVSRDQYLNTEEFIDA 240
           IHGSKV+RD YLNTEEFIDA
Sbjct: 382 IHGSKVTRDWYLNTEEFIDA 401


>ref|XP_002305928.1| predicted protein [Populus trichocarpa] gi|222848892|gb|EEE86439.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = +1

Query: 1   QKGGETSTNSIASIFAWSRGLAHRAKLDDNPRLLDFTQKLEAACVGTVESGKMTKDLALL 180
           QKGGETSTNSIASIFAWSRGLAHRAKLDDN RLLDFT+KLEAAC+G VESGKMTKDLALL
Sbjct: 322 QKGGETSTNSIASIFAWSRGLAHRAKLDDNARLLDFTEKLEAACIGAVESGKMTKDLALL 381

Query: 181 IHGSKVSRDQYLNTEEFIDA 240
           IHGSKVSRD YLNTEEFIDA
Sbjct: 382 IHGSKVSRDHYLNTEEFIDA 401


>gb|ABA18651.1| cytosolic NADP+-isocitrate dehydrogenase [Populus tremula x Populus
           alba]
          Length = 420

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = +1

Query: 1   QKGGETSTNSIASIFAWSRGLAHRAKLDDNPRLLDFTQKLEAACVGTVESGKMTKDLALL 180
           QKGGETSTNSIASIFAWSR LAHRAKLDDN +LLDFT+KLEAACVG VESGKMTKDLALL
Sbjct: 322 QKGGETSTNSIASIFAWSRELAHRAKLDDNAKLLDFTEKLEAACVGAVESGKMTKDLALL 381

Query: 181 IHGSKVSRDQYLNTEEFIDA 240
           IHGSKVSRDQYLNTEEFIDA
Sbjct: 382 IHGSKVSRDQYLNTEEFIDA 401


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