BLASTX nr result

ID: Coptis21_contig00003094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003094
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncat...    66   3e-09
ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncat...    64   2e-08
ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncat...    62   6e-08
ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...    61   8e-08
ref|XP_003606286.1| NBS resistance protein [Medicago truncatula]...    60   2e-07

>ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncatula]
            gi|355517081|gb|AES98704.1| Nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1014

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = +1

Query: 4    LPQGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRKR--ESWTT 177
            LP+G   LT+++ L  +SC+ L   PE ++HL  L++L I +CP LEERC++   E W  
Sbjct: 943  LPEGIRHLTSLRNLQIYSCKGLRCLPEGIRHLTSLEVLTIWECPTLEERCKEGTWEDWDK 1002

Query: 178  NSHIPKIK 201
             +HIPKI+
Sbjct: 1003 IAHIPKIQ 1010


>ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517016|gb|AES98639.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 1016

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = +1

Query: 1    SLP-QGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRKR--ESW 171
            SLP Q +  L +++TL+ +SCE L   PE ++HL  L+LL I  C  L+ERC+KR  E W
Sbjct: 946  SLPEQNWEGLQSLRTLHIYSCEGLRCLPEGIRHLTSLELLTIIGCRTLKERCKKRTGEDW 1005

Query: 172  TTNSHIPKIK 201
               SHIPKI+
Sbjct: 1006 DKISHIPKIQ 1015


>ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517056|gb|AES98679.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 988

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +1

Query: 1    SLP-QGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRK--RESW 171
            SLP Q +  L +++TL  +SCE L   PE ++HL  L+LL I +CP LEERC++   E W
Sbjct: 917  SLPEQNWEGLQSLRTLQIYSCEGLRCLPEGIRHLTSLELLTIINCPTLEERCKEGTGEDW 976

Query: 172  TTNSHIPKIK 201
               +HIP I+
Sbjct: 977  DKIAHIPNIQ 986


>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1063

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1    SLPQGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRK--RESWT 174
            SL +G   LTA++ L+ ++C  L+  PE ++HL  LQ L I  CP L++RC K   E W 
Sbjct: 993  SLSEGVRHLTALENLSLYNCPELNSLPESIQHLTSLQSLSIVGCPNLKKRCEKDLGEDWP 1052

Query: 175  TNSHIPKIKLN 207
              +HI KI++N
Sbjct: 1053 KIAHIRKIRIN 1063


>ref|XP_003606286.1| NBS resistance protein [Medicago truncatula]
            gi|355507341|gb|AES88483.1| NBS resistance protein
            [Medicago truncatula]
          Length = 1766

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +1

Query: 4    LPQGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRK--RESWTT 177
            LP+G   LT ++TL  + CE L   PE ++HL  L+LL I  CP L+ RC++   E W  
Sbjct: 974  LPEGIQHLTFLRTLKIWGCEGLQCLPEGIQHLTSLELLTIGYCPTLKLRCKEGTGEDWDK 1033

Query: 178  NSHIPK 195
             +HIPK
Sbjct: 1034 IAHIPK 1039


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