BLASTX nr result
ID: Coptis21_contig00003094
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003094 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncat... 66 3e-09 ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncat... 64 2e-08 ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncat... 62 6e-08 ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca... 61 8e-08 ref|XP_003606286.1| NBS resistance protein [Medicago truncatula]... 60 2e-07 >ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncatula] gi|355517081|gb|AES98704.1| Nbs-lrr resistance protein [Medicago truncatula] Length = 1014 Score = 65.9 bits (159), Expect = 3e-09 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%) Frame = +1 Query: 4 LPQGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRKR--ESWTT 177 LP+G LT+++ L +SC+ L PE ++HL L++L I +CP LEERC++ E W Sbjct: 943 LPEGIRHLTSLRNLQIYSCKGLRCLPEGIRHLTSLEVLTIWECPTLEERCKEGTWEDWDK 1002 Query: 178 NSHIPKIK 201 +HIPKI+ Sbjct: 1003 IAHIPKIQ 1010 >ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncatula] gi|355517016|gb|AES98639.1| NBS-LRR resistance protein [Medicago truncatula] Length = 1016 Score = 63.5 bits (153), Expect = 2e-08 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = +1 Query: 1 SLP-QGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRKR--ESW 171 SLP Q + L +++TL+ +SCE L PE ++HL L+LL I C L+ERC+KR E W Sbjct: 946 SLPEQNWEGLQSLRTLHIYSCEGLRCLPEGIRHLTSLELLTIIGCRTLKERCKKRTGEDW 1005 Query: 172 TTNSHIPKIK 201 SHIPKI+ Sbjct: 1006 DKISHIPKIQ 1015 >ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncatula] gi|355517056|gb|AES98679.1| NBS-LRR resistance protein [Medicago truncatula] Length = 988 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%) Frame = +1 Query: 1 SLP-QGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRK--RESW 171 SLP Q + L +++TL +SCE L PE ++HL L+LL I +CP LEERC++ E W Sbjct: 917 SLPEQNWEGLQSLRTLQIYSCEGLRCLPEGIRHLTSLELLTIINCPTLEERCKEGTGEDW 976 Query: 172 TTNSHIPKIK 201 +HIP I+ Sbjct: 977 DKIAHIPNIQ 986 >ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 1063 Score = 61.2 bits (147), Expect = 8e-08 Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%) Frame = +1 Query: 1 SLPQGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRK--RESWT 174 SL +G LTA++ L+ ++C L+ PE ++HL LQ L I CP L++RC K E W Sbjct: 993 SLSEGVRHLTALENLSLYNCPELNSLPESIQHLTSLQSLSIVGCPNLKKRCEKDLGEDWP 1052 Query: 175 TNSHIPKIKLN 207 +HI KI++N Sbjct: 1053 KIAHIRKIRIN 1063 >ref|XP_003606286.1| NBS resistance protein [Medicago truncatula] gi|355507341|gb|AES88483.1| NBS resistance protein [Medicago truncatula] Length = 1766 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = +1 Query: 4 LPQGFNQLTAIQTLNFFSCEFLDFTPEDLKHLPMLQLLRISDCPILEERCRK--RESWTT 177 LP+G LT ++TL + CE L PE ++HL L+LL I CP L+ RC++ E W Sbjct: 974 LPEGIQHLTFLRTLKIWGCEGLQCLPEGIQHLTSLELLTIGYCPTLKLRCKEGTGEDWDK 1033 Query: 178 NSHIPK 195 +HIPK Sbjct: 1034 IAHIPK 1039