BLASTX nr result
ID: Coptis21_contig00003063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003063
(672 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein... 114 4e-62
gb|ABK26798.1| unknown [Picea sitchensis] gi|224286069|gb|ACN407... 115 9e-62
emb|CBI15540.3| unnamed protein product [Vitis vinifera] 105 4e-59
sp|O24076.1|GBLP_MEDSA RecName: Full=Guanine nucleotide-binding ... 110 6e-59
emb|CAA96528.1| G protein beta-subunit-like protein [Nicotiana p... 108 1e-58
>gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein subunit beta
[Eschscholzia californica]
Length = 313
Score = 114 bits (284), Expect(3) = 4e-62
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = -3
Query: 445 ITAEGFEYAVPKRRLTGHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGSTTRRFVGH 266
+T E Y VP+RRLTGHSHF+QDVVLSSD QFALSG+WD ELRLWDLNTG+TTRRFVGH
Sbjct: 45 LTKEDPTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGAWDGELRLWDLNTGTTTRRFVGH 104
Query: 265 TKDV 254
TKDV
Sbjct: 105 TKDV 108
Score = 102 bits (255), Expect(3) = 4e-62
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = -1
Query: 177 SVDNRQIVSASRDKSIKLWNTLGECKYTIQEADGHTNWVSSVKFSPFMENPTIVSASWD 1
S+DNRQIVSASRD+SIKLWNTLGECKYTIQ+AD HTNWVS V+FSP PTIVS WD
Sbjct: 114 SIDNRQIVSASRDRSIKLWNTLGECKYTIQDADSHTNWVSCVRFSPNTLQPTIVSGFWD 172
Score = 68.9 bits (167), Expect(3) = 4e-62
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -2
Query: 641 MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVW 513
M + L LR TL+GH DMVTAI+TPIDNS+M VSSSRDKS+LVW
Sbjct: 1 MSDVLVLRGTLKGHDDMVTAIATPIDNSDMIVSSSRDKSILVW 43
>gb|ABK26798.1| unknown [Picea sitchensis] gi|224286069|gb|ACN40746.1| unknown
[Picea sitchensis] gi|224286410|gb|ACN40912.1| unknown
[Picea sitchensis]
Length = 316
Score = 115 bits (288), Expect(3) = 9e-62
Identities = 53/64 (82%), Positives = 58/64 (90%)
Frame = -3
Query: 445 ITAEGFEYAVPKRRLTGHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGSTTRRFVGH 266
+T E +Y VP+RRLTGHSHF+QDVV+SSD QFALSGSWDSELRLWDLNTG TTRRFVGH
Sbjct: 45 LTKEPEKYGVPRRRLTGHSHFVQDVVISSDGQFALSGSWDSELRLWDLNTGLTTRRFVGH 104
Query: 265 TKDV 254
TKDV
Sbjct: 105 TKDV 108
Score = 101 bits (252), Expect(3) = 9e-62
Identities = 46/60 (76%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 SVDNRQIVSASRDKSIKLWNTLGECKYTIQ-EADGHTNWVSSVKFSPFMENPTIVSASWD 1
S+DNRQIVSASRD++IKLWNTLGECKYTIQ +A+GH+NW+S V+FSP NPTIVS SWD
Sbjct: 114 SIDNRQIVSASRDRTIKLWNTLGECKYTIQPDAEGHSNWISCVRFSPSATNPTIVSCSWD 173
Score = 67.4 bits (163), Expect(3) = 9e-62
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -2
Query: 641 MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVW 513
M EAL LR T+ GH D VTAI+TPIDNS+M VSSSRDKS+L+W
Sbjct: 1 MAEALVLRGTMEGHTDAVTAIATPIDNSDMIVSSSRDKSILLW 43
>emb|CBI15540.3| unnamed protein product [Vitis vinifera]
Length = 1318
Score = 105 bits (263), Expect(3) = 4e-59
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3
Query: 445 ITAEGFEYAVPKRRLTGHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGSTTRRFVGH 266
+T + Y VP+RRLTGHSHF+QDVVLSSD QFALSGSWD ELRLWDL G++ RRFVGH
Sbjct: 1100 LTKDDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGH 1159
Query: 265 TKDV 254
TKDV
Sbjct: 1160 TKDV 1163
Score = 102 bits (253), Expect(3) = 4e-59
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = -1
Query: 177 SVDNRQIVSASRDKSIKLWNTLGECKYTIQEADGHTNWVSSVKFSPFMENPTIVSASWD 1
SVDNRQIVSASRD++IKLWNTLGECKYTIQ+AD H++WVS V+FSP PTIVSASWD
Sbjct: 1169 SVDNRQIVSASRDRTIKLWNTLGECKYTIQDADAHSDWVSCVRFSPNNLQPTIVSASWD 1227
Score = 67.8 bits (164), Expect(3) = 4e-59
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -2
Query: 644 KMGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVW 513
KM E L LR T+R H DMVTAI+TPIDNS+M V+SSRDKS+++W
Sbjct: 1055 KMAETLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIILW 1098
>sp|O24076.1|GBLP_MEDSA RecName: Full=Guanine nucleotide-binding protein subunit beta-like
protein gi|2385376|emb|CAA69934.1| G protein beta
subunit-like [Medicago sativa subsp. x varia]
Length = 325
Score = 110 bits (274), Expect(3) = 6e-59
Identities = 50/64 (78%), Positives = 55/64 (85%)
Frame = -3
Query: 445 ITAEGFEYAVPKRRLTGHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGSTTRRFVGH 266
+T E Y VP+RRLTGHSHF+QDVVLSSD QFALSGSWD ELRLWDLN G++ RRFVGH
Sbjct: 45 LTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGH 104
Query: 265 TKDV 254
TKDV
Sbjct: 105 TKDV 108
Score = 101 bits (252), Expect(3) = 6e-59
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = -1
Query: 177 SVDNRQIVSASRDKSIKLWNTLGECKYTIQEADGHTNWVSSVKFSPFMENPTIVSASWD 1
S+DNRQIVSASRD++IKLWNTLGECKYTIQ+ D H++WVS V+FSP PTIVSASWD
Sbjct: 114 SIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTPQPTIVSASWD 172
Score = 63.2 bits (152), Expect(3) = 6e-59
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = -2
Query: 641 MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVW 513
M E L LR T+R H D+VTAI+TPIDNS+M V++SRDKS+++W
Sbjct: 1 MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILW 43
>emb|CAA96528.1| G protein beta-subunit-like protein [Nicotiana plumbaginifolia]
Length = 328
Score = 108 bits (269), Expect(3) = 1e-58
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3
Query: 445 ITAEGFEYAVPKRRLTGHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGSTTRRFVGH 266
+T +G +Y VP+RRLTGH HF+QDVVLSSD FALSGSWD ELRLWDL G+T RRFVGH
Sbjct: 46 LTKDGPQYGVPRRRLTGHGHFVQDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGH 105
Query: 265 TKDV 254
TKDV
Sbjct: 106 TKDV 109
Score = 102 bits (255), Expect(3) = 1e-58
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = -1
Query: 177 SVDNRQIVSASRDKSIKLWNTLGECKYTIQEADGHTNWVSSVKFSPFMENPTIVSASWD 1
SVDNRQIVSASRDKSIKLWNTLGECKYTIQE D H++WVS V+FSP PTIVS SWD
Sbjct: 115 SVDNRQIVSASRDKSIKLWNTLGECKYTIQEGDSHSDWVSCVRFSPNTLQPTIVSGSWD 173
Score = 63.2 bits (152), Expect(3) = 1e-58
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = -2
Query: 635 EALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVWT 510
E+L LR T++ H D VTAI+TPIDNS+M V+SSRDKSL+VW+
Sbjct: 4 ESLVLRGTMKAHTDWVTAIATPIDNSDMIVTSSRDKSLIVWS 45