BLASTX nr result
ID: Coptis21_contig00003058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003058
(1366 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300752.1| predicted protein [Populus trichocarpa] gi|2... 304 3e-80
emb|CBI19744.3| unnamed protein product [Vitis vinifera] 303 9e-80
ref|XP_002281108.1| PREDICTED: cyclin-T1-4 [Vitis vinifera] 303 9e-80
ref|XP_002510431.1| cyclin-dependent protein kinase, putative [R... 302 1e-79
emb|CAN61993.1| hypothetical protein VITISV_030446 [Vitis vinifera] 289 1e-75
>ref|XP_002300752.1| predicted protein [Populus trichocarpa] gi|222842478|gb|EEE80025.1|
predicted protein [Populus trichocarpa]
Length = 426
Score = 304 bits (779), Expect = 3e-80
Identities = 178/366 (48%), Positives = 232/366 (63%), Gaps = 6/366 (1%)
Frame = -2
Query: 1365 HAKSDWRTIGTVSMFLACKMEETPRLLKDVIVVAYEMIYRRDPTASQRIKQKDVYEKQKE 1186
HAK+DW+T+ + SMFLACK+EETPRLL+DV+VVAYE++++RDP+AS RI+Q QKE
Sbjct: 85 HAKNDWKTMASASMFLACKLEETPRLLRDVVVVAYELMHKRDPSASHRIRQIGFCSSQKE 144
Query: 1185 LIVTGERLLLATIGFDFNIQHPYKPLVAALKKLEISGNDVAKVAWNFVNDWLRTTLCLQY 1006
L+VTGERLLLATIGFD ++Q PYKPLV ALKKL I D+AKVAWNFVNDWL TTLCLQY
Sbjct: 145 LLVTGERLLLATIGFDLDVQLPYKPLVNALKKLNIYP-DLAKVAWNFVNDWLCTTLCLQY 203
Query: 1005 KPHYVAAGSLYLAAKFCKVKLPSEKGKVWWLEFDVSPQQLEEVIKQMLELLEENKRPQVP 826
KPHY+AAGS+YLAAKF KVKLP+EKG VWWLEFD+SP+QLEEVI+QM LLE++ + +P
Sbjct: 204 KPHYIAAGSMYLAAKFQKVKLPTEKGNVWWLEFDISPKQLEEVIQQMARLLEQDPKRTLP 263
Query: 825 SSPEKV--TPLLVKQATSTSPESCVLDGSRSTNESMKEIEENGGVGGKSRHPSDACLQNS 652
++ +V + K+ ++S +S V T+ SM + G ++ SD +
Sbjct: 264 ATHGRVPQSKASAKKMVTSSAQSAV------TSVSMSNSLASDGAVMEASSSSDRNTSLN 317
Query: 651 QTLPSHDICVVRNVEVLQCQTSDCGSSLSVVEDGSRTDEGEVQVKMEECNQSAACKIVSD 472
+ LP CQT D G+S SVVEDG +G+ Q + + S++ I
Sbjct: 318 EVLP--------------CQTIDSGAS-SVVEDG----DGKNQPRTGDYELSSSSNIAPS 358
Query: 471 GGGLSKIDKDRIKETWXXXXXXXXXXXXXXXXXXXXXXD----SWIVRELENGIELGCAS 304
ID +I+ET + +WI RELE GIEL A
Sbjct: 359 YNSHHNIDVHQIRETLKRRRCQIAAKSRASLSNETMDAELDTETWIERELEEGIELQTAP 418
Query: 303 SEKRQR 286
SEK++R
Sbjct: 419 SEKKRR 424
>emb|CBI19744.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 303 bits (775), Expect = 9e-80
Identities = 173/359 (48%), Positives = 221/359 (61%)
Frame = -2
Query: 1362 AKSDWRTIGTVSMFLACKMEETPRLLKDVIVVAYEMIYRRDPTASQRIKQKDVYEKQKEL 1183
AK+DW+ I TVSMFLACK EETPRLL+DVI++AYEM YR DP A +RIKQ++ ++KQKEL
Sbjct: 99 AKNDWQIIATVSMFLACKAEETPRLLRDVIIMAYEMTYRCDPPALKRIKQREFFDKQKEL 158
Query: 1182 IVTGERLLLATIGFDFNIQHPYKPLVAALKKLEISGNDVAKVAWNFVNDWLRTTLCLQYK 1003
I+ GERLLL TI FD NI+HPYKP+V ALK++ IS ND+ K A N +NDWL TTLCLQYK
Sbjct: 159 ILIGERLLLGTIAFDLNIEHPYKPIVDALKRMGISNNDLVKAAQNLINDWLCTTLCLQYK 218
Query: 1002 PHYVAAGSLYLAAKFCKVKLPSEKGKVWWLEFDVSPQQLEEVIKQMLELLEENKRPQVPS 823
PHY+AAGSL+LAAKF KVKLP+EKGKVWWL+FDV+P+QLEEVI+QM +LLE + P+
Sbjct: 219 PHYIAAGSLFLAAKFHKVKLPTEKGKVWWLQFDVAPKQLEEVIQQMRKLLENKTQAPSPT 278
Query: 822 SPEKVTPLLVKQATSTSPESCVLDGSRSTNESMKEIEENGGVGGKSRHPSDACLQNSQTL 643
P +V TS P+ C S K + G + N
Sbjct: 279 HARMTKPTVVLGNTSHYPQPCTARESSHGTTVGKPLVSKGSL-------------NVAYS 325
Query: 642 PSHDICVVRNVEVLQCQTSDCGSSLSVVEDGSRTDEGEVQVKMEECNQSAACKIVSDGGG 463
SH C+V+ EV+Q TS S+ SVVEDG +GE+ + E ++++ K VS G
Sbjct: 326 DSH--CIVK--EVIQHPTSGTSSATSVVEDG----DGEIHSRTRESERNSSYKFVSIYGK 377
Query: 462 LSKIDKDRIKETWXXXXXXXXXXXXXXXXXXXXXXDSWIVRELENGIELGCASSEKRQR 286
SKI+ + KE + I +L G E G A+S K+QR
Sbjct: 378 YSKINANPNKENPLERRCSTSSKRSAVARGDEMYSEVCIDGDLRKGREQGYANSHKKQR 436
>ref|XP_002281108.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
Length = 442
Score = 303 bits (775), Expect = 9e-80
Identities = 173/359 (48%), Positives = 221/359 (61%)
Frame = -2
Query: 1362 AKSDWRTIGTVSMFLACKMEETPRLLKDVIVVAYEMIYRRDPTASQRIKQKDVYEKQKEL 1183
AK+DW+ I TVSMFLACK EETPRLL+DVI++AYEM YR DP A +RIKQ++ ++KQKEL
Sbjct: 99 AKNDWQIIATVSMFLACKAEETPRLLRDVIIMAYEMTYRCDPPALKRIKQREFFDKQKEL 158
Query: 1182 IVTGERLLLATIGFDFNIQHPYKPLVAALKKLEISGNDVAKVAWNFVNDWLRTTLCLQYK 1003
I+ GERLLL TI FD NI+HPYKP+V ALK++ IS ND+ K A N +NDWL TTLCLQYK
Sbjct: 159 ILIGERLLLGTIAFDLNIEHPYKPIVDALKRMGISNNDLVKAAQNLINDWLCTTLCLQYK 218
Query: 1002 PHYVAAGSLYLAAKFCKVKLPSEKGKVWWLEFDVSPQQLEEVIKQMLELLEENKRPQVPS 823
PHY+AAGSL+LAAKF KVKLP+EKGKVWWL+FDV+P+QLEEVI+QM +LLE + P+
Sbjct: 219 PHYIAAGSLFLAAKFHKVKLPTEKGKVWWLQFDVAPKQLEEVIQQMRKLLENKTQAPSPT 278
Query: 822 SPEKVTPLLVKQATSTSPESCVLDGSRSTNESMKEIEENGGVGGKSRHPSDACLQNSQTL 643
P +V TS P+ C S K + G + N
Sbjct: 279 HARMTKPTVVLGNTSHYPQPCTARESSHGTTVGKPLVSKGSL-------------NVAYS 325
Query: 642 PSHDICVVRNVEVLQCQTSDCGSSLSVVEDGSRTDEGEVQVKMEECNQSAACKIVSDGGG 463
SH C+V+ EV+Q TS S+ SVVEDG +GE+ + E ++++ K VS G
Sbjct: 326 DSH--CIVK--EVIQHPTSGTSSATSVVEDG----DGEIHSRTRESERNSSYKFVSIYGK 377
Query: 462 LSKIDKDRIKETWXXXXXXXXXXXXXXXXXXXXXXDSWIVRELENGIELGCASSEKRQR 286
SKI+ + KE + I +L G E G A+S K+QR
Sbjct: 378 YSKINANPNKENPLERRCSTSSKRSAVARGDEMYSEVCIDGDLRKGREQGYANSHKKQR 436
>ref|XP_002510431.1| cyclin-dependent protein kinase, putative [Ricinus communis]
gi|223551132|gb|EEF52618.1| cyclin-dependent protein
kinase, putative [Ricinus communis]
Length = 433
Score = 302 bits (774), Expect = 1e-79
Identities = 171/361 (47%), Positives = 229/361 (63%), Gaps = 1/361 (0%)
Frame = -2
Query: 1365 HAKSDWRTIGTVSMFLACKMEETPRLLKDVIVVAYEMIYRRDPTASQRIKQKDVYEKQKE 1186
HA +DW+TI TVS+FLACK+E+TPRLL+DV+VVAYEMIY+ DP+A RI++ + +KQKE
Sbjct: 89 HATNDWQTIATVSIFLACKIEDTPRLLRDVVVVAYEMIYKWDPSAPDRIRRTEFCDKQKE 148
Query: 1185 LIVTGERLLLATIGFDFNIQHPYKPLVAALKKLEISGNDVAKVAWNFVNDWLRTTLCLQY 1006
LI++GE LLL TI FD I+ PY+PL ALKKL+I D+AKVAWNFVNDWL TTLCLQY
Sbjct: 149 LIISGETLLLTTIAFDLGIKLPYRPLFDALKKLKIFP-DLAKVAWNFVNDWLSTTLCLQY 207
Query: 1005 KPHYVAAGSLYLAAKFCKVKLPSEKGKVWWLEFDVSPQQLEEVIKQMLELLEENKRPQVP 826
KPHY+AAGSL+LAAK K+KLP+ KGKVWW+EFD+SP+QLEEVI++M+ LLE++++ +P
Sbjct: 208 KPHYIAAGSLFLAAKLQKLKLPTNKGKVWWMEFDISPKQLEEVIQEMVRLLEQDRKKALP 267
Query: 825 SSPEKVTPLLVKQATSTSPESCVLDGSRSTNESMKEIEENGGVGGKSRHPSDACLQNSQT 646
+ ++ +S G T+ S I G H +D + S+
Sbjct: 268 PTDGRIA------------QSRASVGRMMTSSSQSTITSASIAGS---HSNDGTVVESEV 312
Query: 645 LPSHDICVVRNVEVLQCQTSDCGSSLSVVEDGSRTDEGEVQVKMEECNQSAACKIVSDGG 466
L + + EVL CQTS S+V D+GE Q + + S++CKIVS G
Sbjct: 313 LGA-----INLKEVLPCQTSG-----SIVSSVINNDDGESQPGTGKFDLSSSCKIVSVRG 362
Query: 465 GLSKIDKDRIKETW-XXXXXXXXXXXXXXXXXXXXXXDSWIVRELENGIELGCASSEKRQ 289
SKID +RI+ET ++WI ELENG+EL ASS+K +
Sbjct: 363 FYSKIDANRIRETLKRRRLEGTAKKMSIETINADTDGEAWIEEELENGVELESASSKKNK 422
Query: 288 R 286
+
Sbjct: 423 Q 423
>emb|CAN61993.1| hypothetical protein VITISV_030446 [Vitis vinifera]
Length = 842
Score = 289 bits (739), Expect = 1e-75
Identities = 159/306 (51%), Positives = 202/306 (66%)
Frame = -2
Query: 1347 RTIGTVSMFLACKMEETPRLLKDVIVVAYEMIYRRDPTASQRIKQKDVYEKQKELIVTGE 1168
+ I TVSMFLACK EETPRLL+DVI++AYEM YR DP A +RIKQ++ ++KQKELI+ GE
Sbjct: 521 KIIATVSMFLACKAEETPRLLRDVIIMAYEMTYRCDPPALKRIKQREXFDKQKELILIGE 580
Query: 1167 RLLLATIGFDFNIQHPYKPLVAALKKLEISGNDVAKVAWNFVNDWLRTTLCLQYKPHYVA 988
RLLL TI FD NI+HPYKP+V ALK++ IS ND+ K A N +NDWL TTLCLQYKPHY+A
Sbjct: 581 RLLLGTIAFDLNIEHPYKPIVDALKRMGISNNDLVKAAQNLINDWLCTTLCLQYKPHYIA 640
Query: 987 AGSLYLAAKFCKVKLPSEKGKVWWLEFDVSPQQLEEVIKQMLELLEENKRPQVPSSPEKV 808
AGSL+LAAKF KVKLP+EKGKVWWL+FDV+P+QLEEVI+QM +LLE + P+
Sbjct: 641 AGSLFLAAKFHKVKLPTEKGKVWWLQFDVAPKQLEEVIQQMRKLLENKTQAPSPTHARMT 700
Query: 807 TPLLVKQATSTSPESCVLDGSRSTNESMKEIEENGGVGGKSRHPSDACLQNSQTLPSHDI 628
P +V TS P+ C S K + G + N SH
Sbjct: 701 KPTVVLGNTSHYPQPCTARESSHGTTVGKPLVSKGSL-------------NVAYSDSH-- 745
Query: 627 CVVRNVEVLQCQTSDCGSSLSVVEDGSRTDEGEVQVKMEECNQSAACKIVSDGGGLSKID 448
C+V+ EV+Q TS S+ SVVEDG +GE+ + E ++++ K VS G SKI+
Sbjct: 746 CIVK--EVIQHXTSGTSSATSVVEDG----DGEIHSRTRESERNSSYKFVSIYGKYSKIN 799
Query: 447 KDRIKE 430
+ KE
Sbjct: 800 ANPNKE 805