BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002891
         (1694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vit...   330   7e-88
emb|CBI39159.3| unnamed protein product [Vitis vinifera]              323   9e-86
ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|2...   313   7e-83
ref|XP_002527387.1| DNA binding protein, putative [Ricinus commu...   292   2e-76
ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like...   265   4e-68

>ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
          Length = 357

 Score =  330 bits (846), Expect = 7e-88
 Identities = 195/355 (54%), Positives = 235/355 (66%), Gaps = 6/355 (1%)
 Frame = +2

Query: 215  SSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTDDEFSNVGSESLM-NRFFTGDSSSHA 391
            SS ++      L RYGSAPGS L S V+S+++ TD EFS +GS  +M +++F+GDSSS +
Sbjct: 8    SSSHRSLHSSGLIRYGSAPGSLLTSAVDSLVS-TDREFSPLGSHHIMPHQYFSGDSSSES 66

Query: 392  TDSACKAPPAPQTEIYRTSERGGGLQRSYGLNQLAVGDLATANLRXXXXXXXXXXXXXXX 571
            T   CK    P  +          LQRSYG +++ V   +TA+                 
Sbjct: 67   T---CKVAAPPDHKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGGEGGGGGGSAPS 123

Query: 572  XXX----PAGFFNHLVVDN-GFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLS 736
                   PAGF N L  DN GF+V+RG G+Y+SQ G  N G G  RL SQLSF RQDSLS
Sbjct: 124  LIRHSSSPAGFLNQLTADNCGFSVTRGTGNYSSQGGC-NGGHGISRLKSQLSFKRQDSLS 182

Query: 737  QIXXXXXXXXXXXXXXXXXRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMNGD 916
            QI                 RNA   Y +A SFPM +WD++ NTI+FST  NKRAKN+NGD
Sbjct: 183  QISEVSENMVDGISSDNGHRNATHSYATA-SFPMDAWDNT-NTIVFSTTPNKRAKNINGD 240

Query: 917  IAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTR 1096
            I  +LS ++ QFSLP+TSLEM+ VEKLLQ+  DSVPCK RAKRG ATHPRSIAERERRTR
Sbjct: 241  ILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTR 300

Query: 1097 ISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1261
            IS KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKLNK+L++CTCG KQ
Sbjct: 301  ISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQ 355


>emb|CBI39159.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  323 bits (828), Expect = 9e-86
 Identities = 192/354 (54%), Positives = 232/354 (65%), Gaps = 5/354 (1%)
 Frame = +2

Query: 215  SSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTDDEFSNVGSESLM-NRFFTGDSSSHA 391
            SS ++      L RYGSAPGS L S V+S+++ TD EFS +GS  +M +++F+GDSSS +
Sbjct: 65   SSSHRSLHSSGLIRYGSAPGSLLTSAVDSLVS-TDREFSPLGSHHIMPHQYFSGDSSSES 123

Query: 392  TDSACKAPPAPQTEIYRTSERGGGLQRSYGLNQLAVGDLATANLRXXXXXXXXXXXXXXX 571
            T   CK    P  +          LQRSYG +++ V   +TA+                 
Sbjct: 124  T---CKVAAPPDHKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGGEGGGGGGSAPS 180

Query: 572  XXX----PAGFFNHLVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLSQ 739
                   PAGF N L  DN   ++RG G+Y+SQ G  N G G  RL SQLSF RQDSLSQ
Sbjct: 181  LIRHSSSPAGFLNQLTADN---LTRGTGNYSSQGGC-NGGHGISRLKSQLSFKRQDSLSQ 236

Query: 740  IXXXXXXXXXXXXXXXXXRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMNGDI 919
            I                 RNA   Y +A SFPM +WD++ NTI+FST  NKRAKN+NGDI
Sbjct: 237  ISEVSENMVDGISSDNGHRNATHSYATA-SFPMDAWDNT-NTIVFSTTPNKRAKNINGDI 294

Query: 920  AAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTRI 1099
              +LS ++ QFSLP+TSLEM+ VEKLLQ+  DSVPCK RAKRG ATHPRSIAERERRTRI
Sbjct: 295  LNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRI 354

Query: 1100 SEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1261
            S KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKLNK+L++CTCG KQ
Sbjct: 355  SGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQ 408


>ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|222861885|gb|EEE99427.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  313 bits (803), Expect = 7e-83
 Identities = 188/352 (53%), Positives = 229/352 (65%), Gaps = 3/352 (0%)
 Frame = +2

Query: 215  SSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTDDEFSNVGSESLMNR--FFTGDSSSH 388
            SS  K   P  L+RYGSAPGSFL   V+SVI G D E S +GS  L+ R   F+GDS S 
Sbjct: 10   SSPQKSNLPSGLTRYGSAPGSFLTRAVDSVI-GADRELSGLGSTPLVGRQQHFSGDSPSI 68

Query: 389  ATDSACKAPPAPQTEIYRTSERGGGLQRSYGLNQLAVGDLATANLRXXXXXXXXXXXXXX 568
             ++S CK   +        S  GGGLQRSYGLN++A G  +    R              
Sbjct: 69   TSESTCKVNSSSCDRKAPKSGGGGGLQRSYGLNEIAHGAGSLVRQRSS------------ 116

Query: 569  XXXXPAGFFNHLVVDNG-FTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLSQIX 745
                PAGF +HL  +NG F+++RG G YNS+ GS   G G  RL SQLSFTRQDSLSQI 
Sbjct: 117  ----PAGFLSHLATENGGFSITRGTGGYNSRNGS---GGGPSRLKSQLSFTRQDSLSQIS 169

Query: 746  XXXXXXXXXXXXXXXXRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMNGDIAA 925
                            +N+   Y SA SF M SWD + N+I+FS   +K+A+  +GDI +
Sbjct: 170  EVSENVVEGIGSDNGSQNSTHSY-SAASFGMESWD-TPNSIVFSGHPSKQARTGDGDIYS 227

Query: 926  ALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTRISE 1105
              + +++QFSLP+TSLEM+ VEKLLQI  DSVPCK RAKRG ATHPRSIAERERRTRIS 
Sbjct: 228  CFNALETQFSLPQTSLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISG 287

Query: 1106 KLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1261
            KL+ LQ+LVPNMDKQTS ADML+LAV+HIKGLQ EV+KL+K+L+ CTCG KQ
Sbjct: 288  KLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNEVEKLHKELEGCTCGCKQ 339


>ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
            gi|223533239|gb|EEF34994.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 377

 Score =  292 bits (747), Expect = 2e-76
 Identities = 178/354 (50%), Positives = 217/354 (61%), Gaps = 11/354 (3%)
 Frame = +2

Query: 230  PTGPPSLSRYGSAPGSFLASVVESVINGT----------DDEFSNVGSESLMNRFFTGDS 379
            P     L+R+GSAPGSFL   V+SVI  T          ++  +N  + S    F  GDS
Sbjct: 47   PASGSGLTRFGSAPGSFLTRAVDSVIGTTTSGRDFSALVNNNSNNNNNNSHHQYFSAGDS 106

Query: 380  SSHATDSACKAPPAPQTEIYRTSERGGGLQRSYGLNQLAVGDLATANLRXXXXXXXXXXX 559
            SS  T+S CK   +        S    GLQRSYG N++    L   +             
Sbjct: 107  SSLTTESTCKVNSSNDLRAPAKS----GLQRSYGFNEINGSLLRQKS------------- 149

Query: 560  XXXXXXXPAGFFNH-LVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLS 736
                   PAGF +H L  +NGF+++ G G YNS  G  N G    RL SQLSFTRQDSLS
Sbjct: 150  ------SPAGFLSHHLANENGFSITPGTGGYNSSNGP-NGGHTVSRLKSQLSFTRQDSLS 202

Query: 737  QIXXXXXXXXXXXXXXXXXRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMNGD 916
            QI                  N+   Y + G F MGSWD  +N+I+FS P +KR KN++GD
Sbjct: 203  QISEVSEDIVEGINSNTGHHNSPHSYSTTG-FGMGSWD-GTNSIVFSGPPSKRMKNIDGD 260

Query: 917  IAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTR 1096
            +   L+G+++QFSLP+TSLEM+ VEKLL I  DSVPCK RAKRG ATHPRSIAERERRTR
Sbjct: 261  LFNCLNGLETQFSLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTR 320

Query: 1097 ISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSK 1258
            IS +L+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKL+K+L++CTCG K
Sbjct: 321  ISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTCGCK 374


>ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
          Length = 370

 Score =  265 bits (676), Expect = 4e-68
 Identities = 163/364 (44%), Positives = 211/364 (57%), Gaps = 10/364 (2%)
 Frame = +2

Query: 200  KPMYRSSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTD-DEFSNVGSESLMNRFFTGD 376
            K M  +    P     L+RYGSAPGSFL + V+SVI     D  + + +       +   
Sbjct: 13   KSMSSAHGGAPASAGGLTRYGSAPGSFLTTAVDSVIGTRQPDSAATLRAPPSFGAHYFSS 72

Query: 377  SSSHATDSACKAPPAPQT--EIYRTSERGGGLQRSYGLNQLAVGDLATA-NLRXXXXXXX 547
            + S   +S+ K   +  T  ++  +S     L RSYG N LA+GD +T  N         
Sbjct: 73   ADSSVVESSRKVVQSSSTSNDLKSSSATAAALNRSYGFNDLALGDFSTGRNFNSNGGQSS 132

Query: 548  XXXXXXXXXXXPAGFFNHLVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQD 727
                       PAGF  HL      +V+   G ++   G    G G GRL SQ+SF  QD
Sbjct: 133  SSSPLVRQRSSPAGFLGHL------SVAEPNGGFSLTMGGGGGGNGGGRLKSQMSFNGQD 186

Query: 728  -SLSQIXXXXXXXXXXXXXXXXX----RNAGQGYVSAGSFPM-GSWDDSSNTIMFSTPAN 889
             SLSQI                      N+   +  + +F M  SWD SSN+I+F+ P  
Sbjct: 187  NSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSSNSIVFAAPHA 246

Query: 890  KRAKNMNGDIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRS 1069
            KR+K+ +   A   +G++SQFSLP+T+LEM+ VE+LLQI  DSVPCK RAKRG ATHPRS
Sbjct: 247  KRSKHHSD--ADFFTGLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRS 304

Query: 1070 IAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTC 1249
            IAERERRTRIS KL+KLQELVPNMDKQTS +DMLDLAVQHIKGLQ ++QKLNK++++CTC
Sbjct: 305  IAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTC 364

Query: 1250 GSKQ 1261
            GSK+
Sbjct: 365  GSKE 368