BLASTX nr result

ID: Coptis21_contig00002797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002797
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   290   4e-76
gb|ACB32231.1| nascent polypeptide associated complex alpha [Sol...   281   2e-73
dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   280   4e-73
gb|ABK92784.1| unknown [Populus trichocarpa]                          279   9e-73
gb|ABK93224.1| unknown [Populus trichocarpa]                          277   3e-72

>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  290 bits (742), Expect = 4e-76
 Identities = 159/202 (78%), Positives = 166/202 (82%)
 Frame = +3

Query: 51  MTAQTQEELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGQLADGSRSNKQ 230
           MTAQTQEELLAAHLEQQKI                              Q  D S  +KQ
Sbjct: 1   MTAQTQEELLAAHLEQQKINPDEPVVEEEDDDDDEDDEDDKDEDDVEGEQGGDASGRSKQ 60

Query: 231 SRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIE 410
           SRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIE
Sbjct: 61  SRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIE 120

Query: 411 DLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRS 590
           DLSSQLQTQAAEQFKAPDLSNVI+KPE+S++AQDDEDVDETGVEPKDIELVMTQAGVSRS
Sbjct: 121 DLSSQLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIELVMTQAGVSRS 180

Query: 591 KAVKALKTANGDIVSAIMDLTN 656
           KAVKALK A+GDIVSAIM+LTN
Sbjct: 181 KAVKALKAADGDIVSAIMELTN 202


>gb|ACB32231.1| nascent polypeptide associated complex alpha [Solanum chacoense]
          Length = 199

 Score =  281 bits (718), Expect = 2e-73
 Identities = 153/202 (75%), Positives = 165/202 (81%)
 Frame = +3

Query: 51  MTAQTQEELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGQLADGSRSNKQ 230
           MTAQ+QEELLAAHLEQQK+                              +L DGS  +KQ
Sbjct: 1   MTAQSQEELLAAHLEQQKLESEVPIIEDEEDDDDDDDDEKDDDDAE---ELGDGSGRSKQ 57

Query: 231 SRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIE 410
           SRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIE
Sbjct: 58  SRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIE 117

Query: 411 DLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRS 590
           DLSSQLQ+QAAEQFKAP+LSNVISKPE S +AQDDEDVDETGVEPKDIELVMTQAGVSR+
Sbjct: 118 DLSSQLQSQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDETGVEPKDIELVMTQAGVSRA 177

Query: 591 KAVKALKTANGDIVSAIMDLTN 656
           KAVKAL+ A+GDIVSAIM++TN
Sbjct: 178 KAVKALRAADGDIVSAIMEITN 199


>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  280 bits (716), Expect = 4e-73
 Identities = 154/200 (77%), Positives = 163/200 (81%)
 Frame = +3

Query: 57  AQTQEELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGQLADGSRSNKQSR 236
           AQ+QEELLAAHLEQQKI                            +  L DGS  +KQSR
Sbjct: 4   AQSQEELLAAHLEQQKIESEEPIIEDEEDDDDEDDDDDKDDDDAED--LGDGSGRSKQSR 61

Query: 237 SEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDL 416
           SEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIEDL
Sbjct: 62  SEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDL 121

Query: 417 SSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRSKA 596
           SSQLQTQAAEQFKAP+LSNVISKPE S +AQDDEDVD+TGVEPKDIELVMTQAGVSR+KA
Sbjct: 122 SSQLQTQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDDTGVEPKDIELVMTQAGVSRAKA 181

Query: 597 VKALKTANGDIVSAIMDLTN 656
           VKALK A+GDIVSAIM+LTN
Sbjct: 182 VKALKAADGDIVSAIMELTN 201


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  279 bits (713), Expect = 9e-73
 Identities = 159/203 (78%), Positives = 165/203 (81%), Gaps = 2/203 (0%)
 Frame = +3

Query: 51  MTAQTQEELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXX-AEGQL-ADGSRSN 224
           MTAQTQEELLAA LE QKI                            AEGQ   D S  +
Sbjct: 1   MTAQTQEELLAAQLEIQKILEADKPEVEDEEDDEEDDDEDDDKDEDEAEGQQDGDASGRS 60

Query: 225 KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAK 404
           KQSRSEKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAK
Sbjct: 61  KQSRSEKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAK 120

Query: 405 IEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVS 584
           IEDLSSQLQTQAAEQFKAPDLS+VISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVS
Sbjct: 121 IEDLSSQLQTQAAEQFKAPDLSHVISKPETSAVAQDDEEVDETGVEPKDIELVMTQAGVS 180

Query: 585 RSKAVKALKTANGDIVSAIMDLT 653
           RSKAVKALK A+GDIVSAIMDLT
Sbjct: 181 RSKAVKALKAADGDIVSAIMDLT 203


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  277 bits (709), Expect = 3e-72
 Identities = 159/205 (77%), Positives = 165/205 (80%), Gaps = 3/205 (1%)
 Frame = +3

Query: 51  MTAQTQEELLAAHLEQQKI--XXXXXXXXXXXXXXXXXXXXXXXXXXXAEGQL-ADGSRS 221
           MTAQTQEELLAA LE QKI                             AEGQ   D    
Sbjct: 1   MTAQTQEELLAAQLEVQKILEADKPEVEDEEDDDEDDEDDEDDKDEDEAEGQQDGDVGGR 60

Query: 222 NKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEA 401
           +KQSRSEKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEA
Sbjct: 61  SKQSRSEKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEA 120

Query: 402 KIEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGV 581
           KIEDLSSQLQTQAAEQFKAPDLS+VISKPE+SAIAQDDE+VDETGVEPKDIELVMTQAGV
Sbjct: 121 KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGV 180

Query: 582 SRSKAVKALKTANGDIVSAIMDLTN 656
           SRSKAVKALK A+GDIVSAIM+LTN
Sbjct: 181 SRSKAVKALKAADGDIVSAIMELTN 205


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