BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002736
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154750.1| RNI-like/FBD-like domain-containing protein ...    60   9e-07
ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    58   6e-06
ref|NP_177996.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    57   8e-06

>ref|NP_001154750.1| RNI-like/FBD-like domain-containing protein [Arabidopsis thaliana]
           gi|332006645|gb|AED94028.1| RNI-like/FBD-like
           domain-containing protein [Arabidopsis thaliana]
          Length = 368

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 54/191 (28%), Positives = 73/191 (38%), Gaps = 29/191 (15%)
 Frame = +3

Query: 3   PGCIFTCHTLTVLSLE---AVEFHVRSMVSFPNLKRLELSYCKLHGDNFTGNIFSCCPVL 173
           P  IF    L  L ++    V   V+  VS P LK L L Y K+    F   + S C  L
Sbjct: 52  PSKIFESKALVWLKIQFQDGVSIDVKRGVSLPKLKTLHLDYFKIEPSKFN-KLLSGCHAL 110

Query: 174 EHLILFDDFWYDFNAIIIAPQNLKV------------------------FEYWNDNTGTF 281
           E L+L +  W D +   + P  + +                        ++  N   G  
Sbjct: 111 EELVLINLMWADSSGYKVCPVTVSIPTLKRLKFCRSEDFYEGKFHEYEDYDEENIKKGVS 170

Query: 282 IDICTPNLQKKTYLGMELPNISSETLSSLVSACFTLYANHC-PDK-NLAKILMGLHNVAT 455
           +    PNL    Y  + +         SLV A   L  N   PDK N+ K+LMGLHNV  
Sbjct: 171 LSFDNPNLVYLEYSDVIVDKYKQVRFDSLVEANLGLRKNQAEPDKINVTKLLMGLHNVKI 230

Query: 456 LRFFGGSLELL 488
           L      LE+L
Sbjct: 231 LYLSNDILEVL 241


>ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262213|sp|Q9C8Y8.1|FDL7_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At1g66290
           gi|12324394|gb|AAG52161.1|AC020665_6 hypothetical
           protein; 16490-14953 [Arabidopsis thaliana]
           gi|332196370|gb|AEE34491.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 453

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 16/175 (9%)
 Frame = +3

Query: 12  IFTCHTLTVLSLEAVEFHVRSMVSFPNLKRLELSYCKLHGDNFTGNIFSCCPVLEHLILF 191
           I+ C +L  L L  V       VS P+LK L L + + + +     + S CPVLE   L 
Sbjct: 147 IYNCESLVSLKLSEVTLTKPEFVSLPSLKVLVLDWVEFYNEFAFDMLMSGCPVLESFTLC 206

Query: 192 DDFWYDFNAIIIAPQNLKVFEYWNDNTGTFID-----ICTPNLQKKTYLGMELPNISSET 356
             +  +   + +  Q+L  F Y+  ++ +F D     +  P L+K         +   E 
Sbjct: 207 RRYLDNVRVLRVISQSLLSFNYYGSSSKSFRDDLVVILDAPKLEKLKLSHQLTASFIIEN 266

Query: 357 LSSLVSACFTLYANHCPDKN-----------LAKILMGLHNVATLRFFGGSLELL 488
           LSSLV A   +  N C  K            +   L+GL  V T+     +LE++
Sbjct: 267 LSSLVEADIDIEFNFCRGKKFDPDDLPKREMIRNFLVGLSRVKTMTIAACTLEVI 321


>ref|NP_177996.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75268062|sp|Q9ZV93.1|FDL10_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g78750
           gi|3834319|gb|AAC83035.1| Similar to gi|2244754 heat
           shock transcription factor HSF30 homolog from
           Arabidopsis thaliana chromosome 4 contig gb|Z97335
           [Arabidopsis thaliana] gi|332198025|gb|AEE36146.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 458

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
 Frame = +3

Query: 3   PGCIFTCHTLTVLSLEAVEFHVRSMVSFPNLKRLELSYCKLHGDNFTGNIFSCCPVLEHL 182
           P  ++TC TL  L+L+ +       VS P+LK L LS  K         + S CPVLE+L
Sbjct: 146 PPTLYTCETLVYLTLDGLSLASPKFVSLPSLKELHLSIVKFADHMALETLISQCPVLENL 205

Query: 183 ILFDDFWYDFNAIIIAPQNLKVFEYWND-----NTGTFIDICTPNLQKKTYLGMELPNIS 347
            +   F  DF    +  Q+L  F +  D     N    + I  P L+        + +  
Sbjct: 206 NINRSFCDDFEFTCVRSQSLLSFTHVADTDEMLNEDLVVAIDAPKLKYLRLSDHRIASFI 265

Query: 348 SETLSSLVSA---------CFTLY-ANHCPDKNLAK-ILMGLHNVATLRFFGGSLELL 488
              L+SLV A         C  ++  N    +N+ +  L+G+ ++ TL     +LE++
Sbjct: 266 LNDLASLVEADIDTVFNLICKKMFNPNDLNKRNMIRDFLVGISSIKTLIIASSTLEVI 323