BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002682
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   657   0.0  
ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquino...   655   0.0  
dbj|BAJ33900.1| unnamed protein product [Thellungiella halophila]     655   0.0  
ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group] g...   654   0.0  
ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquino...   653   0.0  

>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
            gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
            putative [Ricinus communis]
          Length = 622

 Score =  657 bits (1696), Expect = 0.0
 Identities = 322/382 (84%), Positives = 339/382 (88%), Gaps = 2/382 (0%)
 Frame = +2

Query: 77   MWRSVSR--QITSSLTKKQPXXXXXXXXXXXXXXYRIVDHTYDXXXXXXXXXXXXXXXXX 250
            MWR V+R  ++ SS +KK                Y IVDHTYD                 
Sbjct: 1    MWRCVARGLRVPSSSSKKS----IYYDSSAGQSSYTIVDHTYDAVVVGAGGAGLRAAIGL 56

Query: 251  SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 430
            SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ
Sbjct: 57   SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 116

Query: 431  YMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL 610
            YMCREAPKAVIELENYGLPFSRTE+G+IYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL
Sbjct: 117  YMCREAPKAVIELENYGLPFSRTEDGRIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL 176

Query: 611  LHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFRAASTILATGGY 790
            LHTLYGQAMKHNTQFFVEYFALDL+M+S G+CQGVIA+NMEDGTLHRFRAASTILATGGY
Sbjct: 177  LHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIAMNMEDGTLHRFRAASTILATGGY 236

Query: 791  GRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGVGCLITEGARGEGGIMR 970
            GRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG GCLITEG+RGEGGI+R
Sbjct: 237  GRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILR 296

Query: 971  NSEGERFMERYAPTAKDLASRDIVCRSMTLEIREGRGVGPLKDHIYLHLNHLPREVLKER 1150
            NSEGERFMERYAPTAKDLASRD+V RSMT+EIREGRGVGPLKDHIYLHLNHLP +VLKER
Sbjct: 297  NSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKER 356

Query: 1151 LPGISETAAIFAGVDITKEPIP 1216
            LPGISETAAIFAGVD+TKEPIP
Sbjct: 357  LPGISETAAIFAGVDVTKEPIP 378


>ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit
            1, mitochondrial-like [Cucumis sativus]
          Length = 635

 Score =  655 bits (1691), Expect = 0.0
 Identities = 325/391 (83%), Positives = 339/391 (86%), Gaps = 11/391 (2%)
 Frame = +2

Query: 77   MWRSVSRQI--TSSLTKK---------QPXXXXXXXXXXXXXXYRIVDHTYDXXXXXXXX 223
            MWR VSR +  +SS ++K         Q               Y +VDHTYD        
Sbjct: 1    MWRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 224  XXXXXXXXXSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 403
                     SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61   AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 404  WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCAC 583
            WLGDQDAIQYMCREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121  WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 584  AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFRAA 763
            AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM+S G+CQGVIALNMEDGTLHRFRAA
Sbjct: 181  AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFRAA 240

Query: 764  STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGVGCLITEG 943
            STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYG GCLITEG
Sbjct: 241  STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 944  ARGEGGIMRNSEGERFMERYAPTAKDLASRDIVCRSMTLEIREGRGVGPLKDHIYLHLNH 1123
            +RGEGGI+RNSEGERFMERYAPTAKDLASRD+V RSMT+EIREGRGVGPLKDHIYLHLNH
Sbjct: 301  SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 1124 LPREVLKERLPGISETAAIFAGVDITKEPIP 1216
            LP +VLKERLPGISETAAIFA VD+TKEPIP
Sbjct: 361  LPPDVLKERLPGISETAAIFADVDVTKEPIP 391


>dbj|BAJ33900.1| unnamed protein product [Thellungiella halophila]
          Length = 626

 Score =  655 bits (1689), Expect = 0.0
 Identities = 321/382 (84%), Positives = 334/382 (87%), Gaps = 2/382 (0%)
 Frame = +2

Query: 77   MWRSVSRQITS--SLTKKQPXXXXXXXXXXXXXXYRIVDHTYDXXXXXXXXXXXXXXXXX 250
            MWR VSR + +  S T                  Y+IVDHTYD                 
Sbjct: 1    MWRCVSRSLRAPYSRTSLSGSRISRLFSTGSTDDYKIVDHTYDAVVVGAGGAGLRAAIGL 60

Query: 251  SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 430
            SEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIQ
Sbjct: 61   SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIQ 120

Query: 431  YMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL 610
            YMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL
Sbjct: 121  YMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL 180

Query: 611  LHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFRAASTILATGGY 790
            LHTLYGQAMKHNTQFFVEYFALDL+M S G+CQGVIALNMEDGTLHRFR+A TILATGGY
Sbjct: 181  LHTLYGQAMKHNTQFFVEYFALDLLMASDGSCQGVIALNMEDGTLHRFRSAQTILATGGY 240

Query: 791  GRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGVGCLITEGARGEGGIMR 970
            GRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG GCLITEG+RGEGGI+R
Sbjct: 241  GRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILR 300

Query: 971  NSEGERFMERYAPTAKDLASRDIVCRSMTLEIREGRGVGPLKDHIYLHLNHLPREVLKER 1150
            NSEGERFMERYAPTAKDLASRD+V RSMT+EIREGRGVGP KDHIYLHLNHLP EVLKER
Sbjct: 301  NSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKER 360

Query: 1151 LPGISETAAIFAGVDITKEPIP 1216
            LPGISETAAIFAGVD+TKEPIP
Sbjct: 361  LPGISETAAIFAGVDVTKEPIP 382


>ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group]
            gi|75135397|sp|Q6ZDY8.1|DHSA_ORYSJ RecName:
            Full=Succinate dehydrogenase [ubiquinone] flavoprotein
            subunit, mitochondrial; AltName: Full=Flavoprotein
            subunit of complex II; Short=FP; Flags: Precursor
            gi|34394418|dbj|BAC83515.1| putative succinate
            dehydrogenase flavoprotein alpha subunit [Oryza sativa
            Japonica Group] gi|113610381|dbj|BAF20759.1| Os07g0134800
            [Oryza sativa Japonica Group]
            gi|215686878|dbj|BAG89728.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218199047|gb|EEC81474.1|
            hypothetical protein OsI_24801 [Oryza sativa Indica
            Group]
          Length = 630

 Score =  654 bits (1688), Expect = 0.0
 Identities = 320/386 (82%), Positives = 335/386 (86%), Gaps = 6/386 (1%)
 Frame = +2

Query: 77   MWRSVSRQITSSLTKKQ------PXXXXXXXXXXXXXXYRIVDHTYDXXXXXXXXXXXXX 238
            MWR    +   SL+K +      P              Y +VDH+YD             
Sbjct: 1    MWRGCVSRGLRSLSKGKGSSSSAPVSAAARLFSTASSSYTVVDHSYDAVVVGAGGAGLRA 60

Query: 239  XXXXSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ 418
                SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ
Sbjct: 61   AIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ 120

Query: 419  DAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRT 598
            D+IQYMCREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSLDFGKGGQAYRCACAADRT
Sbjct: 121  DSIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRT 180

Query: 599  GHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFRAASTILA 778
            GHA+LHTLYGQAMKHNTQFFVEYFALDLIMDS GTCQGVIALNMEDGTLHRFRA +TILA
Sbjct: 181  GHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSEGTCQGVIALNMEDGTLHRFRATNTILA 240

Query: 779  TGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGVGCLITEGARGEG 958
            TGGYGRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG GCLITEG+RGEG
Sbjct: 241  TGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEG 300

Query: 959  GIMRNSEGERFMERYAPTAKDLASRDIVCRSMTLEIREGRGVGPLKDHIYLHLNHLPREV 1138
            GI+RNSEGERFMERYAPTAKDLASRD+V RSMT+EIREGRGVGPLKDHIYLHLNHLP EV
Sbjct: 301  GILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEV 360

Query: 1139 LKERLPGISETAAIFAGVDITKEPIP 1216
            LKERLPGISETAAIFAGVD+TKEPIP
Sbjct: 361  LKERLPGISETAAIFAGVDVTKEPIP 386


>ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit
            1, mitochondrial isoform 2 [Vitis vinifera]
          Length = 622

 Score =  653 bits (1684), Expect = 0.0
 Identities = 321/382 (84%), Positives = 336/382 (87%), Gaps = 2/382 (0%)
 Frame = +2

Query: 77   MWRSVSR--QITSSLTKKQPXXXXXXXXXXXXXXYRIVDHTYDXXXXXXXXXXXXXXXXX 250
            MWR VSR  +  SS +K+                Y IVDHTYD                 
Sbjct: 1    MWRCVSRGLRFRSSDSKRS----LTSDRSSYTSSYTIVDHTYDAVVVGAGGAGLRAAIGL 56

Query: 251  SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 430
            SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ
Sbjct: 57   SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 116

Query: 431  YMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAL 610
            YMCREAPKAVIELENYGLPFSRTE+G+IYQRAFGGQSL+FGKGGQAYRCACAADRTGHAL
Sbjct: 117  YMCREAPKAVIELENYGLPFSRTEDGRIYQRAFGGQSLNFGKGGQAYRCACAADRTGHAL 176

Query: 611  LHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFRAASTILATGGY 790
            LHTLYGQAMKHNTQFFVEYFALDL+MD+ G CQGVIALNMEDGTLHRF+AASTILATGGY
Sbjct: 177  LHTLYGQAMKHNTQFFVEYFALDLLMDNDGACQGVIALNMEDGTLHRFQAASTILATGGY 236

Query: 791  GRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGVGCLITEGARGEGGIMR 970
            GR YFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG GCLITEG+RGEGGI+R
Sbjct: 237  GRTYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILR 296

Query: 971  NSEGERFMERYAPTAKDLASRDIVCRSMTLEIREGRGVGPLKDHIYLHLNHLPREVLKER 1150
            NSEGERFMERYAPTAKDLASRD+V RSMT+EIREGRGVGPLKDHIYLHLNHLP EVLKER
Sbjct: 297  NSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKER 356

Query: 1151 LPGISETAAIFAGVDITKEPIP 1216
            LPGISETAAIFAGVD+TKEPIP
Sbjct: 357  LPGISETAAIFAGVDVTKEPIP 378